Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1008 | ATGACATCTAGTGGTGGTGGCGGAAGCGGCGGCTCTCCTTGTGGAGCATGCAAGTTTCTACGTCGGAAGTGTGCACCGGATTGCATTTTTGCTCCGTACTTCTGCTCGGAGCAAGGGCCTGCCCGTTTTGCAGCGATTCATAAAGTATTTGGTGCTAGTAATGTGTCCAAGTTATTGTTACATATCCCAATTGCCGATCGATGTGAAGCCGTTGTTACTATAGCTTATGAAGCTCAAGCCAGGATCAAGGATCCTGTTTACGGTTGTGTTTCTCATATATTTGCCCTCCAACAACAGGTGGCATGGCTTCAAGCTCAACTTATGCAAACCAAGGCACAACTAGCTCATCAAACCATCGTGAATTCACGTAACATGGAGAATGAATGGGTAGGAAATTACATGAGTGGAGTCCCAAGCTTTGCGTCTTATAATCCTACTCATGTCAATTCCATTTCACCTCAAAGCTCGCTTGAATCCGTCGATCATAGCATCAATAACGATCTGATGTGCACACAAGAGATACAAAGCCGAGATCACGATCGAGAACTCGGTGAATTCCAGCCTAATTACAATTCTAGGAAGAGACCGTGCAACAATGATAGCAATGGTGATGACTTAAGCGAGCTTCAAGCATTGGCTTTTAGAATGATGAGAAACTAG | 660 | 44.85 | MTSSGGGGSGGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPIADRCEAVVTIAYEAQARIKDPVYGCVSHIFALQQQVAWLQAQLMQTKAQLAHQTIVNSRNMENEWVGNYMSGVPSFASYNPTHVNSISPQSSLESVDHSINNDLMCTQEIQSRDHDRELGEFQPNYNSRKRPCNNDSNGDDLSELQALAFRMMRN | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7775944 | 7776774 | - | Conep07aG0103700.1 | Cone7ag1008 | 441604 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1008 | 219 | ProSiteProfiles | LOB domain profile. | 12 | 114 | IPR004883 | - | |
Cone7ag1008 | 219 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 9 | 189 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Cone7ag1008 | 219 | MobiDBLite | consensus disorder prediction | 191 | 205 | - | - | |
Cone7ag1008 | 219 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 111 | IPR004883 | - | |
Cone7ag1008 | 219 | MobiDBLite | consensus disorder prediction | 184 | 205 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0542 | Cone-Chr3:2684662 | Cone7ag1008 | Cone-Chr7:7775944 | 1.41E-45 | dispersed | |
Cone4ag1122 | Cone-Chr4:9698498 | Cone7ag1008 | Cone-Chr7:7775944 | 3.12E-138 | dispersed | |
Cone7ag1008 | Cone-Chr7:7775944 | Cone8ag1587 | Cone-Chr8:11808670 | 2.92E-37 | dispersed | |
Cone7ag1007 | Cone-Chr7:7769199 | Cone7ag1008 | Cone-Chr7:7775944 | 4.63E-54 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46518 | PF00069 | Pkinase | 2.50E-17 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1008 | K13944 | - | vvi:100261792 | 274.248 |