Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1008 ATGACATCTAGTGGTGGTGGCGGAAGCGGCGGCTCTCCTTGTGGAGCATGCAAGTTTCTACGTCGGAAGTGTGCACCGGATTGCATTTTTGCTCCGTACTTCTGCTCGGAGCAAGGGCCTGCCCGTTTTGCAGCGATTCATAAAGTATTTGGTGCTAGTAATGTGTCCAAGTTATTGTTACATATCCCAATTGCCGATCGATGTGAAGCCGTTGTTACTATAGCTTATGAAGCTCAAGCCAGGATCAAGGATCCTGTTTACGGTTGTGTTTCTCATATATTTGCCCTCCAACAACAGGTGGCATGGCTTCAAGCTCAACTTATGCAAACCAAGGCACAACTAGCTCATCAAACCATCGTGAATTCACGTAACATGGAGAATGAATGGGTAGGAAATTACATGAGTGGAGTCCCAAGCTTTGCGTCTTATAATCCTACTCATGTCAATTCCATTTCACCTCAAAGCTCGCTTGAATCCGTCGATCATAGCATCAATAACGATCTGATGTGCACACAAGAGATACAAAGCCGAGATCACGATCGAGAACTCGGTGAATTCCAGCCTAATTACAATTCTAGGAAGAGACCGTGCAACAATGATAGCAATGGTGATGACTTAAGCGAGCTTCAAGCATTGGCTTTTAGAATGATGAGAAACTAG 660 44.85 MTSSGGGGSGGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPIADRCEAVVTIAYEAQARIKDPVYGCVSHIFALQQQVAWLQAQLMQTKAQLAHQTIVNSRNMENEWVGNYMSGVPSFASYNPTHVNSISPQSSLESVDHSINNDLMCTQEIQSRDHDRELGEFQPNYNSRKRPCNNDSNGDDLSELQALAFRMMRN 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7775944 7776774 - Conep07aG0103700.1 Cone7ag1008 441604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1008 219 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Cone7ag1008 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 9 189 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cone7ag1008 219 MobiDBLite consensus disorder prediction 191 205 - -
Cone7ag1008 219 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
Cone7ag1008 219 MobiDBLite consensus disorder prediction 184 205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0542 Cone-Chr3:2684662 Cone7ag1008 Cone-Chr7:7775944 1.41E-45 dispersed
Cone4ag1122 Cone-Chr4:9698498 Cone7ag1008 Cone-Chr7:7775944 3.12E-138 dispersed
Cone7ag1008 Cone-Chr7:7775944 Cone8ag1587 Cone-Chr8:11808670 2.92E-37 dispersed
Cone7ag1007 Cone-Chr7:7769199 Cone7ag1008 Cone-Chr7:7775944 4.63E-54 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46518 PF00069 Pkinase 2.50E-17 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1008 K13944 - vvi:100261792 274.248