Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1014 ATGGGTGAGAAATTTTGGGAGAATGAAGAAGACAAAGCCATGGTTGAATCCATACTAGGTACAGAAGCAATCCAGTTTTTGATTTCATTGGGTTCTAGAGATTTGTTATCCGAGATTGTTACGTTACCGCCTCCAGGTGGTGATTTGGGTGTGCAAAGAGGGCTTTATGAACTCGTACAAGGGTCTAATTGGAATTATGCAATTTTTTGGCGGGCCGTGGGCTTGAAATCCGGTTCCTCGACCTTGATTTGGGCCGATGGACACTGCTCCGATCCTAAGATTCATGGTGTTGGCCAGTTTGGAGAAGATGAGAAAAAGATGGTTAAAAGGCAGGTGCTCCAAAAGCTTCAGACAAGTTTCAGAAGGTTTAACGAAACTAATTACTTGCCAAAACCAGATGAAGTTTTGTCGGATTTTGAGATGTTCTACCTTACTTCTATGTATTTTGCATTTCCATGTGATTTAGCAAGTGGGCCGCCTGGGGAATCGTACAAGTCTGGTAAATCCATTTGGGCCTCAGATAGTGGTACCTGCTTACACAACTACCAATCAAGAGCATTTCTAGCAAGATCAGTCGGGTTCCAAACTACAGTTTTTGTAACTGTGAAATCTGGAGTTGTTGAGCTGGGTTCAGTGAAATCAATCCCGGAAGAACAGAATGTTCTTGAAATGGTCAAAACCATGTTTGAATATCATTCTAGTTCCTTACAGTCAAAGGCCGTTCCAAAAATCTTCGGGCGGGAACTAAGTCTAGGTTCTAAATCCCTTAGTATTAACTTATCCGCTAAGGTTGAAGATGACACAATCTTCAATTCAGATGCTTATGAAACCCAAGCATTGAGTACTAATAATATTTACGGGAATTCTTCCAACGGGTCTCCAATTGACGTTAATGAGGCGAAACTGTTTTCTCAAACAAGAGGGTCGTTTTTGGAATTTCCAAAGGATGATTCATCGCCGCCACAGGCCGAGGAGAGGAAACCTAGGAAGAGGGGGAGAAAGCCAGCCAACGGGAGAGAAGAGCCGTTAAACCACGTGGTAGCAGAGCGGCAAAGGCGGGAGAAGCTTAACCAGCGTTTCTACGCCTTAAGAGCTGTTGTCCCTAATATCTCTAAGATGGACAAGGCCTCTTTGCTTGGAGATACCATTACCTATATAACTGATCTTCAGATGAAGATTAAGGTTTTGGAAACGGAAAAACAGTTTGTGGGCGATAATGAGAAGCAGTTTTTGGAAACGGAAATTGATTTTCAGGCAAGAGAGGAGGATGCTGTTGTGAGGGTGAGTTGCCCGCTTGATTCTCACCCGGTTTCTAGAGTGATCCATACGTTTAGAGAGCATCAGATTGTAGCTCAAGACTCTAATGTTTCCACGGCAGAGAATGATAGAATTGTTCATTCTTTCTCCATTCGAGCTCAAGGTGGGTCCGCTGAGCAATTGAAGGAGAAGTTAGTGGCTGCCCTCTCTAAGTGA 1473 43.52 MGEKFWENEEDKAMVESILGTEAIQFLISLGSRDLLSEIVTLPPPGGDLGVQRGLYELVQGSNWNYAIFWRAVGLKSGSSTLIWADGHCSDPKIHGVGQFGEDEKKMVKRQVLQKLQTSFRRFNETNYLPKPDEVLSDFEMFYLTSMYFAFPCDLASGPPGESYKSGKSIWASDSGTCLHNYQSRAFLARSVGFQTTVFVTVKSGVVELGSVKSIPEEQNVLEMVKTMFEYHSSSLQSKAVPKIFGRELSLGSKSLSINLSAKVEDDTIFNSDAYETQALSTNNIYGNSSNGSPIDVNEAKLFSQTRGSFLEFPKDDSSPPQAEERKPRKRGRKPANGREEPLNHVVAERQRREKLNQRFYALRAVVPNISKMDKASLLGDTITYITDLQMKIKVLETEKQFVGDNEKQFLETEIDFQAREEDAVVRVSCPLDSHPVSRVIHTFREHQIVAQDSNVSTAENDRIVHSFSIRAQGGSAEQLKEKLVAALSK 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7847175 7849285 - Conep07aG0104300.1 Cone7ag1014 441610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1014 490 MobiDBLite consensus disorder prediction 318 346 - -
Cone7ag1014 490 CDD bHLH_AtAIB_like 337 401 - -
Cone7ag1014 490 Pfam Helix-loop-helix DNA-binding domain 344 390 IPR011598 GO:0046983(InterPro)
Cone7ag1014 490 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983(InterPro)
Cone7ag1014 490 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 229 IPR025610 -
Cone7ag1014 490 SMART finulus 346 395 IPR011598 GO:0046983(InterPro)
Cone7ag1014 490 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 402 IPR036638 GO:0046983(InterPro)
Cone7ag1014 490 MobiDBLite consensus disorder prediction 310 346 - -
Cone7ag1014 490 PANTHER MYC 49 490 IPR045084 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)
Cone7ag1014 490 Gene3D - 333 404 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1014 Cone-Chr7:7847175 Cone8ag0471 Cone-Chr8:3119283 2.38E-31 dispersed
Cone4ag1118 Cone-Chr4:9647855 Cone7ag1014 Cone-Chr7:7847175 5.02e-312 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46519 PF00571 CBS 1.90E-13 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1014 - - - 0.0