Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1018 | ATGGAAGAGTTAGAAGAAGCTAACAGAGGGGCTGTGCAAAGCTTCCATAGAGTTCTAATCCTATTAACTCAGCCTCAGGATCAAGTTCAGCGTAGGAATTTAATGGCAGAAACAGGGGAAACTGTTTTTAGATTCAGAAAACTGATTTCTCTTCTAAACACTGGTTTGGGTCATGCAAGAGCCAGAAAGCTCAAGAAACTCCAAGTCCCTTTTCCTCAAAGCATTCTCTTAGACAACCCGAATTGCAAAACCGAGCCTCAAACCCCAGACAATAACCTTCAACTTTTCTTGGGTAAAAACCCATCTTTAGAATTAGTCTCAAATGGTAAGAACCCTCTCCAATTTTCTGAACAAAAACAAGCCCCTTCTCCTCACTATCACTTTCTTCAACAACAACAACAACAACAACGACGAAGGTTGTTTCTTCAGCATCAGCGTATGAAACAACAACAACAAGCCGAAATGCTGCTAAGTAGGAGTAATAATGGTGTTATAAGTCTGACTTTTGATAGCTCTAGTTGCACCCCTACAATGTCATCTACTACTGGATCATTTATCTCTTCGTTGAGCATGGATGGGAGCGTGGCTAATTTGGCTGCTGGCAGTGCATTTCATTTGCTTGGGGCAGCATCTCATTCTTCAGATCATGTTTCGCAGCATAAGAGAAAGTTCTTAGGGAGAGAAATTGAAGGGAGTGTTAAATGTGGAGGTAGTGGTAAATGCCATTGTTCAAAAAAGAGAAAGCATAGAGTGAAAAGATTGATCAAAGTACCGGCCATAAGTAACAAGCTCGCAGACATTCCCCCAGATGATTATTCATGGAGAAAATATGGGCAGAAGCCGATAAAGGGTTCTCCCCATCCTAGGGGATACTACAAGTGCAGTAGCATGAGAGGTTGCCCGGCAAGGAAGCATGTGGAGAGGTGCTTAGATGAGCCATCAATGCTTATCGTAACCTATGAAGGCGAGCACAACCACCCAAGGGTACCTTCTCAATCCGCAAACACATAG | 1011 | 42.83 | MEELEEANRGAVQSFHRVLILLTQPQDQVQRRNLMAETGETVFRFRKLISLLNTGLGHARARKLKKLQVPFPQSILLDNPNCKTEPQTPDNNLQLFLGKNPSLELVSNGKNPLQFSEQKQAPSPHYHFLQQQQQQQRRRLFLQHQRMKQQQQAEMLLSRSNNGVISLTFDSSSCTPTMSSTTGSFISSLSMDGSVANLAAGSAFHLLGAASHSSDHVSQHKRKFLGREIEGSVKCGGSGKCHCSKKRKHRVKRLIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLDEPSMLIVTYEGEHNHPRVPSQSANT | 336 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7867537 | 7869683 | - | Conep07aG0104700.1 | Cone7ag1018 | 441614 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1018 | 336 | SMART | WRKY_cls | 268 | 328 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1018 | 336 | SUPERFAMILY | WRKY DNA-binding domain | 266 | 328 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1018 | 336 | ProSiteProfiles | WRKY domain profile. | 263 | 329 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1018 | 336 | Pfam | Plant zinc cluster domain | 229 | 266 | IPR018872 | - | |
Cone7ag1018 | 336 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 332 | IPR044810 | GO:0003700(InterPro) | |
Cone7ag1018 | 336 | FunFam | WRKY transcription factor 65 | 252 | 329 | - | - | |
Cone7ag1018 | 336 | Gene3D | WRKY domain | 253 | 330 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone7ag1018 | 336 | Pfam | WRKY DNA -binding domain | 270 | 327 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone7ag1018 | Cone-Chr7:7867537 | Cone9ag1341 | Cone-Chr9:10068119 | 4.70E-55 | dispersed | |
Cone17ag0272 | Cone-Chr17:1288799 | Cone7ag1018 | Cone-Chr7:7867537 | 9.87E-17 | wgd | |
Cone17ag0596 | Cone-Chr17:3167378 | Cone7ag1018 | Cone-Chr7:7867537 | 3.56E-117 | wgd | |
Cone20ag0815 | Cone-Chr20:5790000 | Cone7ag1018 | Cone-Chr7:7867537 | 1.43E-121 | wgd | |
Cone20ag1141 | Cone-Chr20:7768393 | Cone7ag1018 | Cone-Chr7:7867537 | 2.93E-16 | wgd | |
Cone4ag1113 | Cone-Chr4:9616935 | Cone7ag1018 | Cone-Chr7:7867537 | 6.90E-184 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46520 | PF02383 | Syja_N | 2.20E-80 | CL0031 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1018 | - | - | - | 0.0 |