Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag1020 | ATGAGCAAGGGTCCTAAGGGAGAAGAAGATGCTATTCTTGTTCCGATGAAGAAAAAGACTACACCTTCAACGACCTGGATTTGTGTGGACCATGATGGAAAGACTAACATTTTGGATGTAGATAAATATGTTATTATGCAGAGAGTTCAGATTCATGCCCGAGATCTTCGAATTCTGGACCCGCTCTTATCTTATCCTTCCACTATCTTAGGCAGAGAAAGAGTTATTGTTCTCAATCTAGAGCACATCAAAGCTATAATCACTGCAGATGAGGTGCTACTTAGAGATCCTTTGGATGAAAACATAGTTCCTATTGTTGAAGAATTCAGAAGAAGATTGCCTTTGGTAAATTCCGGTTTCCAAGGACAAGGAGAAGAAGTAGAAGAATCGGCCGATCCTCAAAACGACTTTGGAAACGGCAAAGAAAACGGGCAAAACTTAAAATTTCCATTTGAATTCCGGGCTTTGGAAATCACACTAGAGGCAATTTGTAGCTTTCTTGATGCCAGAACAAGAGAACTCGAGACAGAAACCTATCCAGCTTTAGATGAGCTCACCTCCAAAATTAGCAGTCTTAATCTCGATAGAGTGCGTAAACTCAAAAGCGCGATGACGAGGTTGACCAATCGAGTTCAAAAGGTAAGAGATGAACTTGAACAGCTCCTTGACGACGATGACGACATGGCAGAACTTTACCTATCAAGAAAGACGGAAAGAGAAGAAGCTTCTCCTAGCTGGTTTCTCCACTCTCCCGATAGCTCTTCGATATCCCGAACAAGCAGGACTAGTGGGAGAACAAGCCAAGGAGAGAACGACATCGAGGAATTAGAAATGTTGCTCGAGGCTTACTTTATGGAAGTTGAAGGTACACTAAACAAACTGAACACGCTGCGAGAATACATCGATGATACAGAGGATTACATTAACATTCAGCTTGACAGCCATAGAAATCAGCTAATTCAGCTGGAGCTGTTTCTGAGTGCTGGGACAGTCTGCGTGACAGTATATTCTTTGGTGGCTGCTATTTTCGGGATGAATATCCCCTACACATGGAAGAAAGGCCATGACTACATGTTCAAATGGGTGGTTATTGTTGCAACACTGGTTTGCAGCTCCCTGCTCGTTTCGATAATTTCTTATGCAAGACATAGAGGCCTTGTTGGATCTTGA | 1170 | 42.48 | MSKGPKGEEDAILVPMKKKTTPSTTWICVDHDGKTNILDVDKYVIMQRVQIHARDLRILDPLLSYPSTILGRERVIVLNLEHIKAIITADEVLLRDPLDENIVPIVEEFRRRLPLVNSGFQGQGEEVEESADPQNDFGNGKENGQNLKFPFEFRALEITLEAICSFLDARTRELETETYPALDELTSKISSLNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKTEREEASPSWFLHSPDSSSISRTSRTSGRTSQGENDIEELEMLLEAYFMEVEGTLNKLNTLREYIDDTEDYINIQLDSHRNQLIQLELFLSAGTVCVTVYSLVAAIFGMNIPYTWKKGHDYMFKWVVIVATLVCSSLLVSIISYARHRGLVGS | 389 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7874808 | 7878765 | - | Conep07aG0104900.1 | Cone7ag1020 | 441616 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag1020 | 389 | FunFam | Magnesium transporter MRS2-1 | 14 | 97 | - | - | |
| Cone7ag1020 | 389 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 325 | 375 | IPR045863 | - | |
| Cone7ag1020 | 389 | CDD | Mrs2_Mfm1p-like | 26 | 386 | IPR039204 | - | |
| Cone7ag1020 | 389 | MobiDBLite | consensus disorder prediction | 243 | 270 | - | - | |
| Cone7ag1020 | 389 | Gene3D | Magnesium transport protein CorA, transmembrane region | 124 | 319 | - | - | |
| Cone7ag1020 | 389 | Gene3D | - | 12 | 97 | - | - | |
| Cone7ag1020 | 389 | MobiDBLite | consensus disorder prediction | 247 | 269 | - | - | |
| Cone7ag1020 | 389 | Coils | Coil | 197 | 224 | - | - | |
| Cone7ag1020 | 389 | FunFam | Magnesium transporter MRS2-5 | 127 | 319 | - | - | |
| Cone7ag1020 | 389 | Pfam | Magnesium transporter MRS2-like | 32 | 316 | - | - | |
| Cone7ag1020 | 389 | MobiDBLite | consensus disorder prediction | 121 | 142 | - | - | |
| Cone7ag1020 | 389 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 21 | 386 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone14ag0131 | Cone-Chr14:606039 | Cone7ag1020 | Cone-Chr7:7874808 | 2.16E-122 | dispersed | |
| Cone15ag0138 | Cone-Chr15:647124 | Cone7ag1020 | Cone-Chr7:7874808 | 7.90E-166 | dispersed | |
| Cone3ag0920 | Cone-Chr3:4724747 | Cone7ag1020 | Cone-Chr7:7874808 | 5.74E-93 | dispersed | |
| Cone3ag1040 | Cone-Chr3:29212260 | Cone7ag1020 | Cone-Chr7:7874808 | 7.93E-81 | dispersed | |
| Cone4ag0290 | Cone-Chr4:1342275 | Cone7ag1020 | Cone-Chr7:7874808 | 5.77E-36 | dispersed | |
| Cone4ag0291 | Cone-Chr4:1342874 | Cone7ag1020 | Cone-Chr7:7874808 | 4.31E-36 | dispersed | |
| Cone4ag1110 | Cone-Chr4:9607687 | Cone7ag1020 | Cone-Chr7:7874808 | 1.60E-137 | dispersed | |
| Cone7ag0295 | Cone-Chr7:1272309 | Cone7ag1020 | Cone-Chr7:7874808 | 6.64E-30 | dispersed | |
| Cone7ag1020 | Cone-Chr7:7874808 | Cone9ag0537 | Cone-Chr9:2568874 | 2.40E-81 | dispersed | |
| Cone17ag0276 | Cone-Chr17:1309074 | Cone7ag1020 | Cone-Chr7:7874808 | 2.93E-101 | wgd | |
| Cone20ag1134 | Cone-Chr20:7734583 | Cone7ag1020 | Cone-Chr7:7874808 | 2.18E-73 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag1020 | K16075 | - | csv:101220452 | 521.546 |