Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1127 ATGAAGATGGTGATGCCAGTTATGCTTAAGCTGGTTTTTTTCTGTCTGATTGCTTCTGAACTCCTAGTTCAAGGATCCACAGGAGTTGAAATATCCCCCTCCCCGAACACCTTTTCTGCAATTGCTCCAATCAAAGAAACACCCGGTCCTTCCACTCAAGGGACAGATTCAAATCCTCCTCTTGCATCGCCGCCTCTTCCATCACCTCTAACTCCGATTCCCCAAACAGCAAAAGGGCACACACCATCTTTGCCTCCAAGTACATCTACTACTATATCACCATCATCTAATAATCCACTTACACCACCACCTCTTTCATCACCTCCAATTTCCGGCACAGCTAAAGGGTCGTTGCCGTCTTCACCTCCTAATACATCTACTACTATAACACCATCACATAATAATCCACTAATATCACCTCCTCTTCCATCACCTCCAATTGCCCAAACAGCTAAGGGGTTCACACCATCTTTACCTCCTAGTACATTTACTACCATATCACCATCTCATAATATGGGTCCTCCACCCTTGACTGATCGAGGAAAACATTCACCTTCCCCACTTCCAAGTCCACCCATAAATCAGACGAATACTGTCTCCACGATTACTCCAGTTTCGGTTATAACACCTTCAAATAGTCCCCCACGAATCTCACCTGCTACTCAACCGATCATTCCAGTAACCTTGGCGCCAAGTAATCATGAAAGTAATGTATCGGGCGTTAAGGCTCCTATGCCCGTGCCAGTTATTCTAGTACCAGCAGTCTCACCTCCAACTGAATTTCCTCAACAGTCACCACCGACTCAACCGCTTATTCCAGGAGAATCTCCATCCAAGTCCCAAGACCATGATGTCTCTCCAGCATTAGCTCCTTCCACTGCTATTGGAAACGGAAAGAGGGATAGTAATCCGGTGACTTCACCTTCAAATGAAATTCCCAGAGCAGTACAACCTGTGAAGCATTCTCCAAAACAAGCTCCTTCCATTCATAATGATGCTCCTCCTCCCTTTCTTTCTTCACCTAAATCTCCAATTGGCGATCCTTCTACAGCCTTTTCTCCCTCATCCTCAAATAATAAGCATCATCATGCAAGGACCAAAACTATCAGTCCTGTTCCGATAACTTCACGCCCGGTTTCTTCTCCCACTATCGATCGAAAAGGACCAGTCATCCCTCCAATTCCAAAAATTAGGAAAAGTCCCTATGGTCTTCCACCACTTAATTCAGGCAATTCAACATCGCCATCAAATTTCTCCTCTCGATCCCCACAAAGCCGAATCTCACCTTCTGCATCACCATCTGAAAAATCGGAACCTGGCCAACCAAAAATTCCATCTCATCCCCCTAAAGTTTCTCCTTCCGGATCTTCACCAAAGTCTCAGAAGAAACCATTACTGCCACCAATTCAAGCATTTCCACCTCCACCTCCAAATGAAGTTCCATCTCATCCCCCTAAAGTTTCTCCTTTCGGACCTTCACCAAAGTCTCCGAAGAAACCATTACTGCCACCAATTCAAGCATTTCCACCTCCACCTCCAAATGAAGATTGTTCAACAACCATATGCACAGAGCCCTATACAAATACTCTCCCTGGTTCACCCTGTAACTGTGTTTTGCCCATGCAAGTTGGACTTCGCCTCAGTGTTGCTCTATATACCTTCTTCCCTCTAGTTTCCGAGCTTGCCCAAGAAATTGCAAGTGGAGTTTTTATGAAACAAAGTCAGGTCCGGATAATTGGAGCAAATGCAGCTAATCAAGAACCCGATAAAACAGTTGTTCTTATTGACTTGGTGCCTTTAGGGGAGAGGTTTGACAACACTACGGCTTTTTTGACTTTTCAGAGGTTTTGGAATGAAAAGATTGTCATAAAAGCTTCATTCTTTGGTGATTATGAAGTACTCTACGTTCGCTATCCAGGTCTACCTCAACCTCCACCTTCTGTGATCTCTGTAATAGATGGGGGACCATATCCCGGGGATGATAATAATGGTGGGACAATAAAGCCCCTTGGGGTTGATGTGCAGAAAGGGCGACGTAAAGGTGGGCCTGGCCCTGCCATGACTGTGATTATCGCTCTATCATCAGTTGTAGCAGTGGTTCTATGTGGTACAAGTGCTTGGTTTTTTCTTCTAAGAAATAGAGACCAGATTGCTCGGCATGATCCAACTCCTCAAATTTATGCACCTTCCCATGCCAAACCGTCAGGTACTGCTGGAACGGTCACAGGTAGTATACCTAGCTCTGCTTCTTTATCGGTTGGGTCTAGTATACCTGCATATACTGGATCTGCTAAAACATTTAGCACAAGTGACATAGATAAAGCCACAAATAATTTCGACTCAAATAGAATACTTGGGGAAGGTGGGTTTGGACTTGTTTACCACGGTGTTCTTGAAGACGGGACCGACGTAGCAGTCAAAGTTTTAAAGAGGGATGATCATCAAGGTAGCCGGGAATTCTTGGCCGAAGTGGAAATGCTTAGCCGACTTCATCATAGAAATTTGGTCAAGCTGCTCGGAATATGTACAGAAGAACGATCTCGTTGCCTTGTTTACGAACTTATTCCAAATGGTAGTGTCGACTCTCATTTACATGGAATTGATAAGGAAACTTCTCCGCTTGACTGGGCTTCAAGGATGAAAATAGCACTTGGTGCTGCTCGGGGTTTAGCCTATCTACACGAGGATTCAAGCCCTAGGGTAATACATAGGGACTTCAAGTCTAGCAATATCTTGCTCGAACAAGATTTCACACCAAAAGTGTCCGACTTCGGTTTGGCTCGAACGGCTTTGGATGAGGAGAATAGACACATATCCACACGTGTCATGGGAACTTTCGGCTATGTGGCTCCGGAATACGCAATGACTGGCCATCTTCTCGTAAAGAGTGATGTCTACAGCTACGGAGTTGTGCTCCTTGAGCTTTTAACGGGACGGAAGCCCGTTGACATGTCACAGCCACCCGGTCAAGAGAACCTAGTCACGTGGGCCCGCCCACTACTCACGAGTAAGGAAGGGTTAGAATCAATAGTCGACCAGTCTCTAGATTCCGACGTCGCTTTCGATAGTGTGGCAAAAGTAGCTGCCATTGCTTCCATGTGTGTGCAGCCCGAGGTAGAGCACCGCCCATTTATGGGTGAAGTAGTCCAAGCACTAAAACTAGTTTGTAATGAGTGCGACAAGGAGAGAGAAGGTTCAAGGGGTTCAAGCCAAGAAGATTTCTCGCTCAGTATGGATGATAATGGAGCTAGTACAAGCACTAGACAGTTACAAGGTTCTTTACATAGGGAATATTCGGTAACTAACTCCGAATATTCCGTGTTCGATATGGAGCAGAGGCTTTCAGTTTCGGAGTTGTTGAGTGCATCAACAAGGTTTGAGACGCTGGAGTTCGGATCGCTTAGAAGGCACTCATGTTCAGGTCCTTTGAGAATGGGTAGAGGATGGAGGTTTTGGAAGAGAGGGAAGAGACTTTGTGGGGGTGGAAGTATTAGTGACCATGGTCATACGTTCCAGTTATGGCCTGGTTCCTACTAA 3537 45.52 MKMVMPVMLKLVFFCLIASELLVQGSTGVEISPSPNTFSAIAPIKETPGPSTQGTDSNPPLASPPLPSPLTPIPQTAKGHTPSLPPSTSTTISPSSNNPLTPPPLSSPPISGTAKGSLPSSPPNTSTTITPSHNNPLISPPLPSPPIAQTAKGFTPSLPPSTFTTISPSHNMGPPPLTDRGKHSPSPLPSPPINQTNTVSTITPVSVITPSNSPPRISPATQPIIPVTLAPSNHESNVSGVKAPMPVPVILVPAVSPPTEFPQQSPPTQPLIPGESPSKSQDHDVSPALAPSTAIGNGKRDSNPVTSPSNEIPRAVQPVKHSPKQAPSIHNDAPPPFLSSPKSPIGDPSTAFSPSSSNNKHHHARTKTISPVPITSRPVSSPTIDRKGPVIPPIPKIRKSPYGLPPLNSGNSTSPSNFSSRSPQSRISPSASPSEKSEPGQPKIPSHPPKVSPSGSSPKSQKKPLLPPIQAFPPPPPNEVPSHPPKVSPFGPSPKSPKKPLLPPIQAFPPPPPNEDCSTTICTEPYTNTLPGSPCNCVLPMQVGLRLSVALYTFFPLVSELAQEIASGVFMKQSQVRIIGANAANQEPDKTVVLIDLVPLGERFDNTTAFLTFQRFWNEKIVIKASFFGDYEVLYVRYPGLPQPPPSVISVIDGGPYPGDDNNGGTIKPLGVDVQKGRRKGGPGPAMTVIIALSSVVAVVLCGTSAWFFLLRNRDQIARHDPTPQIYAPSHAKPSGTAGTVTGSIPSSASLSVGSSIPAYTGSAKTFSTSDIDKATNNFDSNRILGEGGFGLVYHGVLEDGTDVAVKVLKRDDHQGSREFLAEVEMLSRLHHRNLVKLLGICTEERSRCLVYELIPNGSVDSHLHGIDKETSPLDWASRMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEQDFTPKVSDFGLARTALDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSKEGLESIVDQSLDSDVAFDSVAKVAAIASMCVQPEVEHRPFMGEVVQALKLVCNECDKEREGSRGSSQEDFSLSMDDNGASTSTRQLQGSLHREYSVTNSEYSVFDMEQRLSVSELLSASTRFETLEFGSLRRHSCSGPLRMGRGWRFWKRGKRLCGGGSISDHGHTFQLWPGSY 1178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8486782 8496217 + Conep07aG0116200.1 Cone7ag1127 441723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1127 1178 ProSitePatterns Protein kinases ATP-binding region signature. 785 807 IPR017441 GO:0005524(InterPro)
Cone7ag1127 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 256 273 - -
Cone7ag1127 1178 PANTHER OS01G0750732 PROTEIN 514 1099 IPR050885 -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 40 59 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 193 215 - -
Cone7ag1127 1178 ProSiteProfiles Protein kinase domain profile. 779 1055 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 296 313 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 74 96 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 343 359 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 467 516 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 1070 1094 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 256 516 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 150 172 - -
Cone7ag1127 1178 Gene3D Transferase(Phosphotransferase) domain 1 855 1079 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 723 743 - -
Cone7ag1127 1178 CDD STKc_IRAK 785 1053 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 40 222 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 405 439 - -
Cone7ag1127 1178 SUPERFAMILY Protein kinase-like (PK-like) 758 1052 IPR011009 -
Cone7ag1127 1178 Gene3D Phosphorylase Kinase; domain 1 753 854 - -
Cone7ag1127 1178 Pfam Protein tyrosine and serine/threonine kinase 782 1052 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 1063 1094 - -
Cone7ag1127 1178 FunFam receptor-like serine/threonine-protein kinase ALE2 752 854 - -
Cone7ag1127 1178 MobiDBLite consensus disorder prediction 110 135 - -
Cone7ag1127 1178 FunFam Receptor-like serine/threonine-protein kinase ALE2 855 1072 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0817 Cone-Chr18:5195317 Cone7ag1127 Cone-Chr7:8486782 1.86E-198 dispersed
Cone20ag1003 Cone-Chr20:7052299 Cone7ag1127 Cone-Chr7:8486782 8.71E-117 dispersed
Cone7ag1127 Cone-Chr7:8486782 Cone14ag1133 Cone-Chr14:9414814 3.99E-97 dispersed
Cone9ag0962 Cone-Chr9:4811402 Cone7ag1127 Cone-Chr7:8486782 5.25E-30 dispersed
Cone17ag0100 Cone-Chr17:531345 Cone7ag1127 Cone-Chr7:8486782 1.97E-256 wgd
Cone20ag1308 Cone-Chr20:8501028 Cone7ag1127 Cone-Chr7:8486782 2.88E-256 wgd
Cone5ag1061 Cone-Chr5:4688553 Cone7ag1127 Cone-Chr7:8486782 6.91E-35 wgd
Cone7ag0733 Cone-Chr7:4436877 Cone7ag1127 Cone-Chr7:8486782 2.07E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83047 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1127 - - - 0.0