Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1134 ATGAGGAAGAAGAGATTGGCTTCTGAGATAGAGTTTGATTCCAGCTCCGCCAGCGCAGGTGGTGGGGATCATGCTAGGTTTTGTCGCCGGAGCTTCTCAACCGCAGCCGCTACCACCGCCGTGGCTAATATTCAAAACCCAACGGCTATGATAGCAGCCGTTAATGTCATCCCCAACTACTCCACTTTACTACCCACCACTTCTTCTTCCACGTCAAGTACTGAAGCTATTCATATAACCACTCCTCTTCCTCCTCATCCTCTCATTGCGAATGACAGTAATACCCTTTCCTCCCTCCTTCTACAGCAACAGCAACAACAATCTCACCCTCCCGTTTGCGGGTTCTCGGGTCTTCCTCTATTCCCTGCCGAAGCCGAAAGGTCTCGGATATTCCAACCTCCAATCAATCCAAATCGGGGTAGTTTCAACCAGGAGGTTGGCATCGTGGGCCCGATCATCCCAAGTACTACTGCTATTACTAATACTTTCGGCATGGATGAAAACTCGGGCGGGCCCGCCTCGGCGTCGATGACATGGATCGACAGCATTACTAAAGACCTTATCCAAAGCTCCTCATCCGGTGTTTCCATCCCTCAACTTATTCAAAATGTTCGGGAAATCATTTATCCTTGTAACCCCAATGTTGCCACCTTACTAGAGTACCGCCTCCGTTCCTTAATCCAACAACCCGATCCGATTAATAATTACCCGATTGATGATCCCATACGGAGACAACAAGTGCCGCCACCACCATCACCACCACCGCCACCATCCAATACTGCTACTCAAATTACTATCCCGCCACCGGAACAACAACGACAACAACAACAAGAACAACAACAAAAATGTGCCTCGCTTTCGGAGATTGCAATGAAGAAGGAAGAGATGAAGCAACAGAAGAGAGACGAGGAAGGGTTGCACCTTCTGACATTACTACTACAATGCGCGGAGGCGGTTTCTACTGATAATTACGAAGAAGCCAACAAGATGTTGTTGGAGATTTCAGAACTATCAACGCCTTTCGGGACAGCGGCTCAAAGGGTGGCAGCTTATTTCTCAGAGGCAATGTCCGCCAGGCTAGTGAGTTCTTGTCTCGGGATATATGCCGCTTTTCCGACCAATTTAGTCCCGGCTCTTAGCAATATTAATCAAAAGATGGCGTCAGCTTTTCAAGTGTTTAATGGGATTAGTCCCTTGGTTAAGTTCTCCCATTTCACCTCAAACCAAGCCATACAGGAAGCCTTTGAGAGAGAGCAAAGGGTGCATATCATAGATCTAGATGTAATGCAAGGGTTACAATGGCCGGGACTCTTCCATATATTGGCGTCTAGGCCAGGTGGGCCACCGTACGTGCGGTTGACCGGGCTAGGGACCTCTTTGGAGGCCCTAGAGGCCACGGGGAAGCGACTATCGGACTTTGCCGAGAAGTTAGGGCTTCCATTCGAGTTCTTTCCGGTTGCAGAAAAAGTCGGAAACTTGGATCCAGAAAGGTTGAATGTAGATAGCAAGAGGGAGGCCGTCGCCGTGCATTGGTTGCAACATTCCCTATACGATGTAACCGGTTCCGATTTCAATACCCTACAACTTTTGCAGAGGTTGTCGCCGAAAGTGGTGACGGTGGTAGAGCAAGATCTGAGCCGTGGATGCTCCAACTTCTTGGGAAGGTTCGTGGAGGCAATACATTATTACTCGGCGCTCTTCGACTCGCTAGGAGTAAGCTACGGGGAGGAAAGTCAAGAGAGACATGTAGTGGAACAACAGTTACTGTCGAGGGAGATAAAAAACGTGCTAGCCATTGGGGGCGGAGGAGGAGGAGGAGGAGGCGGACCCACGTCGAGGAAGTTCAACAAGTACTGGAGGGAGAAGTTGAGAGAATCCGGGTTTAAGAGCGTGTCTTTGGCAGGAAATGCTGCCTCCCAAGCCACGCTTCTCCTGGGGATGTTCCCGTCCGATGGTGGGTATACTTTGGTGGAGGACAATGGGACTCTCAAGCTCGGATGGAAAGACCTTTGTTTACTCACAGCTTCTGCTTGGAGACCTTGGTGA 2046 49.76 MRKKRLASEIEFDSSSASAGGGDHARFCRRSFSTAAATTAVANIQNPTAMIAAVNVIPNYSTLLPTTSSSTSSTEAIHITTPLPPHPLIANDSNTLSSLLLQQQQQQSHPPVCGFSGLPLFPAEAERSRIFQPPINPNRGSFNQEVGIVGPIIPSTTAITNTFGMDENSGGPASASMTWIDSITKDLIQSSSSGVSIPQLIQNVREIIYPCNPNVATLLEYRLRSLIQQPDPINNYPIDDPIRRQQVPPPPSPPPPPSNTATQITIPPPEQQRQQQQEQQQKCASLSEIAMKKEEMKQQKRDEEGLHLLTLLLQCAEAVSTDNYEEANKMLLEISELSTPFGTAAQRVAAYFSEAMSARLVSSCLGIYAAFPTNLVPALSNINQKMASAFQVFNGISPLVKFSHFTSNQAIQEAFEREQRVHIIDLDVMQGLQWPGLFHILASRPGGPPYVRLTGLGTSLEALEATGKRLSDFAEKLGLPFEFFPVAEKVGNLDPERLNVDSKREAVAVHWLQHSLYDVTGSDFNTLQLLQRLSPKVVTVVEQDLSRGCSNFLGRFVEAIHYYSALFDSLGVSYGEESQERHVVEQQLLSREIKNVLAIGGGGGGGGGGPTSRKFNKYWREKLRESGFKSVSLAGNAASQATLLLGMFPSDGGYTLVEDNGTLKLGWKDLCLLTASAWRPW 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8539060 8542034 - Conep07aG0116900.1 Cone7ag1134 441730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1134 681 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 285 678 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER)
Cone7ag1134 681 MobiDBLite consensus disorder prediction 1 23 - -
Cone7ag1134 681 Pfam GRAS domain family 309 679 IPR005202 -
Cone7ag1134 681 MobiDBLite consensus disorder prediction 264 281 - -
Cone7ag1134 681 MobiDBLite consensus disorder prediction 243 263 - -
Cone7ag1134 681 ProSiteProfiles GRAS family profile. 299 679 IPR005202 -
Cone7ag1134 681 MobiDBLite consensus disorder prediction 232 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1228 Cone-Chr4:10230605 Cone7ag1134 Cone-Chr7:8539060 9.08E-47 dispersed
Cone6ag0242 Cone-Chr6:1123729 Cone7ag1134 Cone-Chr7:8539060 1.82E-136 dispersed
Cone7ag0907 Cone-Chr7:7127372 Cone7ag1134 Cone-Chr7:8539060 3.20E-46 dispersed
Cone7ag1134 Cone-Chr7:8539060 Cone9ag0274 Cone-Chr9:1182967 4.50E-134 dispersed
Cone20ag0784 Cone-Chr20:5523915 Cone7ag1134 Cone-Chr7:8539060 6.81E-126 transposed
Cone4ag1007 Cone-Chr4:8713276 Cone7ag1134 Cone-Chr7:8539060 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46530 PF00226 DnaJ 6.20E-18 CL0392 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1134 K27742 - ath:AT3G54220 671.774