Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag1143 | ATGGAAAACAGCGAAAGCCCAGATTTTTTTGCTAATCCAACAATTCTGCAGAATAACAGGCTACATGAGTATATACTGGAGTCTAGTGTTTACCCACGAGAGCATGAGCTTCTGAAGGAGCTAAGGGAAGCTACTGCAAACCATCCCAAGTTTTTCTTTGGCACTTCACCTGATGCAGGTCAGCTAATCTCAATGCTTTTAAAGCTAGTGAATGCAAAAAAAACAATTGAAGTAGGAGTCTTCACTGGATACTCTCTTCTCTTAACTGCTCTCACCATTCCTCATGATGCCAAGATCACTGCCATTGATATCAACAAAGAAGCATATGAGAACATAGGGTTGCCTATCGTCGAAAAATCCGGTGTCGGCCATAAAATCGATTTTATTGAGTCCGCAGCTCTGCCTGTCCTTGAAAAACTCTTAGAAGATGAGGCGAATGAAGGAGATTTTGATTTTGCATTTATTGATGCTGACAAGAACAACTATTGGAATTACCATGAGAAGCTAATGAAGCTTGTTAAGGTTGGGGGGATACTTGTCTATGATAACACTTTGTGGGGAGGATATGTTGCTTTGCCAGAGGAGGCTGTTCCGACTTCTAAACGAGTTTTCACACGTAGCACAATAGAGTTCAATAAGTCGATATCAGCCGATAGCCGTGTTGATATATGTCTTACTTCTATCGGTGACGGGCTCACCATCTGCAAGCGTGTTTTCTGA | 720 | 41.81 | MENSESPDFFANPTILQNNRLHEYILESSVYPREHELLKELREATANHPKFFFGTSPDAGQLISMLLKLVNAKKTIEVGVFTGYSLLLTALTIPHDAKITAIDINKEAYENIGLPIVEKSGVGHKIDFIESAALPVLEKLLEDEANEGDFDFAFIDADKNNYWNYHEKLMKLVKVGGILVYDNTLWGGYVALPEEAVPTSKRVFTRSTIEFNKSISADSRVDICLTSIGDGLTICKRVF | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 8595412 | 8596831 | - | Conep07aG0117900.1 | Cone7ag1143 | 441739 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag1143 | 239 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 18 | 237 | IPR029063 | - | |
| Cone7ag1143 | 239 | Gene3D | Vaccinia Virus protein VP39 | 8 | 239 | IPR029063 | - | |
| Cone7ag1143 | 239 | Pfam | O-methyltransferase | 27 | 238 | IPR002935 | GO:0008171(InterPro) | |
| Cone7ag1143 | 239 | CDD | AdoMet_MTases | 76 | 181 | - | - | |
| Cone7ag1143 | 239 | PANTHER | O-METHYLTRANSFERASE-RELATED | 14 | 237 | IPR050362 | GO:0008757(PANTHER) | |
| Cone7ag1143 | 239 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 14 | 238 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0462 | Cone-Chr13:5048778 | Cone7ag1143 | Cone-Chr7:8595412 | 6.94E-67 | dispersed | |
| Cone7ag1143 | Cone-Chr7:8595412 | Cone8ag1124 | Cone-Chr8:9929186 | 4.26E-91 | dispersed | |
| Cone7ag1143 | Cone-Chr7:8595412 | Cone19ag0420 | Cone-Chr19:3480860 | 7.06E-73 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag1143 | K00588 | - | mdm:103426660 | 330.872 |