Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1164 ATGAAGACCAAAACGCCTTTGAAGCAGCTCAAGCTCTCTGTTCCTGCTCAACAAACCCCTATCACCTCCTTCTTTAAAGGTTCCAGAACTGCAAGTGGAACCTTTCATGAAGGTGGTCTACTATTGAATCAAAAAGGCTTGAGGCTTATTTCTGAAGAAAAGGAATCTCGTCCTTCAGACTGCAAAGAACCTGATTTCGAGTTCTCGTTAGAAGATCTTGAAACTGTTAAGGTCATAGGGAAAGGAAGCGGTGGTGTGGTTCAACTTGTTCGTCATAAATGGGTTGGCAGATTATTCGCCTTGAAGGTGATCCAGATGAACATACAAGAGGAGATCCGTAAACAGATAGTACAAGAGCTGAAAATAAACCAAGCAGCACAATGCCCTCATGTTGTAGTATGCTACCACTCTTTCTACCACAACGGAGCCATCTCTCTCGTGCTAGAATACATGGATCGTGGATCTCTAGCCGACGTGATCAAGCAGATCAAAACAATTCTCGAACCTTATCTTGCAGTCGTCTGTAAGCAGGTGTTACAAGGTCTACTGTACTTGCATAATGAAAGACATGTAATACATAGAGACATAAAGCCATCAAATTTGCTAGTAAACCATACAGGGGAGGTGAAGATTACTGATTTTGGTGTCAGTGCCATGCTCGCTAGCTCCATGGGTCAGAGAGATACATTTGTAGGAACTTATAATTACATGTCGCCAGAGAGGATTAGTGGGAGTACTTATGACTATAGCAGTGATATATGGAGTTTAGGGATGGTAGTACTAGAGTGTGCTATAGGGAGGTTTCCTTATATGAAATCTGAAGATCAGGAAACTTGGCCGAGCTTTTATGAGCTTCTCGAAGCAATTGTGGTGAGCCCACCGCCTTCTGCTCCACCTGATCAGTTCTCTCCTGAGTTCTGCTCATTTGTATCTTCTTGCATTAAAAAGGACCCAAGAGACAGATCCACATCTTTGGACCTTTTGAGCCATCCTTTTATAAAGAAGTTTGAGGATAAAGACATTGATCTTGGGATTCTTTTCGGCAGCTTGGAACCTCCTGTTAGTTTTCCCAGATAA 1077 42.62 MKTKTPLKQLKLSVPAQQTPITSFFKGSRTASGTFHEGGLLLNQKGLRLISEEKESRPSDCKEPDFEFSLEDLETVKVIGKGSGGVVQLVRHKWVGRLFALKVIQMNIQEEIRKQIVQELKINQAAQCPHVVVCYHSFYHNGAISLVLEYMDRGSLADVIKQIKTILEPYLAVVCKQVLQGLLYLHNERHVIHRDIKPSNLLVNHTGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVVLECAIGRFPYMKSEDQETWPSFYELLEAIVVSPPPSAPPDQFSPEFCSFVSSCIKKDPRDRSTSLDLLSHPFIKKFEDKDIDLGILFGSLEPPVSFPR 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8676600 8678699 + Conep07aG0120100.1 Cone7ag1164 441760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1164 358 CDD PKc_MAPKK_plant_like 71 337 - -
Cone7ag1164 358 SMART serkin_6 73 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1164 358 Pfam Protein kinase domain 74 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1164 358 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524(InterPro)
Cone7ag1164 358 FunFam Mitogen-activated protein kinase kinase 6 43 152 - -
Cone7ag1164 358 ProSiteProfiles Protein kinase domain profile. 73 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1164 358 SUPERFAMILY Protein kinase-like (PK-like) 71 342 IPR011009 -
Cone7ag1164 358 Gene3D Transferase(Phosphotransferase) domain 1 154 347 - -
Cone7ag1164 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1164 358 Gene3D Phosphorylase Kinase; domain 1 42 152 - -
Cone7ag1164 358 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 50 345 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone7ag1164 358 FunFam Mitogen-activated protein kinase kinase 6 154 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0716 Cone-Chr3:3670629 Cone7ag1164 Cone-Chr7:8676600 3.18E-76 dispersed
Cone4ag0048 Cone-Chr4:242138 Cone7ag1164 Cone-Chr7:8676600 1.44E-150 dispersed
Cone7ag0046 Cone-Chr7:199505 Cone7ag1164 Cone-Chr7:8676600 8.26E-150 dispersed
Cone7ag0750 Cone-Chr7:4589460 Cone7ag1164 Cone-Chr7:8676600 2.75E-145 dispersed
Cone7ag1164 Cone-Chr7:8676600 Cone8ag0483 Cone-Chr8:3319602 5.94E-30 dispersed
Cone17ag1162 Cone-Chr17:8567212 Cone7ag1164 Cone-Chr7:8676600 5.20E-21 wgd
Cone7ag0749 Cone-Chr7:4583179 Cone7ag1164 Cone-Chr7:8676600 4.33E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83048 PF00300 His_Phos_1 1.30E-07 CL0071 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1164 K04368 - gmx:100786284 637.106