Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1181 ATGGCTTACGACCCGCTCAACACGGAGACTGAGTCGAGCTTTACCAACACCTCCTCCTTTTCCTCTCCTTGCTCATCATCATCAGCTTCTTCATCGGGTCCAAACGGGCGGATATCCGGACCGGTTCCGGCACAGAAACGGCCTAAGAGATCGCGAGATACTAATGACAATAACAACAGTAGACATCCGGTTTATCGGGGGATCCGAATGAGGGCGTGGGGCAAATGGGTGTCCGAAATCAGAGAACCGAAAAAGAAGAACCGGATCTGGCTCGGCACTTTTTCCACGCCCGAAATGGCAGCGCGTGCACATGACGTGGCCGCTCTAACCATCAAAGGTGCCAGCTCAGCAATCCTCAACTTCCCCGAACTCGCTGATTCACTCCCCCGACCCGCTTCCAGCTCCCCGCGGGATGTCCAGGCAGCCGCCGCTAAAGCTGCCAACATGGAGCTTCCGACTCCGCAACCACCGCGGCATCCTCCTCCTCCTCCTCCTCCGTCCTCGTCCGAATCATCCTCCTCCTCTTCTTCTTCTTCTTCTACTTCGCAGGAGGAGCTGAGTGAGATAGTGGAGCTGCCGAGCTTGGGATCGAGTTACGAGTCGGGGAACGAGTTCGTGTTCGTCGACTCGGTGGATGGGTGGATGTATCCCCACCCGTGGTGTCACAGTATCATTGATGACGATGATTTTGGATACTTGTTTTGGCAACATTAA 714 55.18 MAYDPLNTETESSFTNTSSFSSPCSSSSASSSGPNGRISGPVPAQKRPKRSRDTNDNNNSRHPVYRGIRMRAWGKWVSEIREPKKKNRIWLGTFSTPEMAARAHDVAALTIKGASSAILNFPELADSLPRPASSSPRDVQAAAAKAANMELPTPQPPRHPPPPPPPSSSESSSSSSSSSSTSQEELSEIVELPSLGSSYESGNEFVFVDSVDGWMYPHPWCHSIIDDDDFGYLFWQH 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8804049 8805095 - Conep07aG0121800.1 Cone7ag1181 441777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1181 237 Gene3D AP2/ERF domain 64 123 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 MobiDBLite consensus disorder prediction 1 38 - -
Cone7ag1181 237 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677(InterPro)
Cone7ag1181 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 46 208 IPR051032 -
Cone7ag1181 237 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 MobiDBLite consensus disorder prediction 128 188 - -
Cone7ag1181 237 SMART rav1_2 64 128 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 MobiDBLite consensus disorder prediction 153 169 - -
Cone7ag1181 237 ProSiteProfiles AP2/ERF domain profile. 64 122 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 CDD AP2 65 124 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 Pfam AP2 domain 63 113 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1181 237 FunFam Ethylene-responsive transcription factor 2 63 123 - -
Cone7ag1181 237 MobiDBLite consensus disorder prediction 1 67 - -
Cone7ag1181 237 MobiDBLite consensus disorder prediction 170 188 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0599 Cone-Chr20:3503235 Cone7ag1181 Cone-Chr7:8804049 6.05E-55 dispersed
Cone4ag1240 Cone-Chr4:10302694 Cone7ag1181 Cone-Chr7:8804049 8.91E-39 dispersed
Cone7ag0894 Cone-Chr7:6995942 Cone7ag1181 Cone-Chr7:8804049 4.47E-43 dispersed
Cone7ag0962 Cone-Chr7:7465563 Cone7ag1181 Cone-Chr7:8804049 3.59E-31 dispersed
Cone7ag1181 Cone-Chr7:8804049 Cone9ag0662 Cone-Chr9:3150302 1.59E-32 dispersed
Cone17ag0153 Cone-Chr17:766808 Cone7ag1181 Cone-Chr7:8804049 2.34E-52 wgd
Cone17ag1123 Cone-Chr17:8317270 Cone7ag1181 Cone-Chr7:8804049 2.07E-53 wgd
Cone4ag0772 Cone-Chr4:4457176 Cone7ag1181 Cone-Chr7:8804049 1.27E-63 wgd
Cone4ag0949 Cone-Chr4:8070103 Cone7ag1181 Cone-Chr7:8804049 6.83E-121 wgd
Cone7ag0709 Cone-Chr7:4093784 Cone7ag1181 Cone-Chr7:8804049 1.58E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46533 PF01277 Oleosin 8.70E-41 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1181 K09286 - csv:101219745 230.72