Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1196 ATGGCGTCTCAGGTCAAACCCTTCCTCTTTACCCTTCTTGCTACTCTCCCTCTCATTTCTCTTGTTCTTGCCCAGAGCGATCAAACCGGGTTCATCAGTTTAGACTGTGGATTAACATCAAACGAAACCTACGTAGAGCCAATTACAGGTTTAAAGTACACAACAGATGCGAAATACATCGACACGGGAGAATCCAATTCGGTATCATCTGAGTACTTAACTACATCTCTCAAACAACAGCTCGCAACTCTCAGAAGCTTCCCGGATGGAGTCAGAAACTGTTACAACATAAGTAGTGTCGTAAAAAACACCCGATACTTGATCCGAGCTAGCTTTCTATATGCAAATTACGACAACCGGAACTTTACGCCCTCGTTCGAACTCCACTTTGGTCCGAATCTTTGGGATTCCGTCACGTTTGAAAAGGTGAATACTATCCTACACAAGGAGATCATTCACATTCCCTCCTCAAATTATATTGAGATTTGTCTTGTGAACACGAATGATGGGGACCCTTTTATTTCGTCGATTGAGTTAAGGCCCCTTTTAAACGACACTTATGTAACTCAAGGTGGAGCCTCTTTGAGTACGTTCTTGCGGCTTGATGTTGCTTCGACAACCAATGATACTTACAGGTACAAGGATGATGCATTCGATAGAATCTGGTCCCCAGCAGTTCCCCTAGCGGCTTGGACAACCATAAGCACCGATTTAACAATCGATCGTACCAGCCACATCGACTTACAACCGCCGCGCCAGGTGATGGTGTCGGCTGCGATCCCAAAAAATGCAAGTGCACCTATGGAATTCAATTGGGCTGGACCCGATACTACCACCGAATTCTACGTCTACATGTATTTTGCAGAAATCCAAGAGCTGTCGGCCAATCAGAGTCGATTATTCACCATCTTTCTAAATGGGCGTCCTTGGCTAGAGGAGAACGTCCGTATCAGCTACCTTAACTCAAACGTTGTTTATAGCACCCTCCCGATAAGCGGGGGCACATATGATTTTTCACTTGTTAGATCTAACGGTTCCACACTTCCGCCCATCCTCAATGCCATAGAAATCTACTCCGTCATCAAATTCCCTCTATCTGAAACCGACCAAGGAGATGTGGGCGCCATGTTAAACGTAAAGAGTGATTATGGAATAAAGAAAAATTGGCAAGGAGATCCTTGTGTGCCAAGAGATTACATCTGGGAAGGGGTTGGCTGTATTAACTCTACGGATTCTGATTCTCCTAGAATCAACTCCTTGAACCTATCGTCTAGTGGACTAATTGGACAAATAACTTCAGATATTGCCAATCTCCAATTACTCGAGATCTTGGATCTGTCTAATAATAGCTTAAGTGGATTAGTACCCGATTTCCTCACTCAATTGTCTAAGCTGAGATTTCTAAACTTGGGAAATAACAACTTTTCAGGAACCATTTCACCTGGGCTCACTGATAAGTCCTCACTAACAATAATTGTGGACGGAAATCCGAATCTAGGATCGACTACAAACACTACCAGCAATGGGAAGAAGAAGAAGAGCAGTGTTGTCGGTCCGGTCGTAGGATCAGTTGCAGGAGTTATTGTTGTTGCATTGATCATTGTGGCTGCTATTTTTTATTTCTATAAAAAGAACAATCCCCGAGGAGCTGTAACAACGGAGATTGAGGCGATTAGAAGTACTCCTAATAGCCAAGCAAGTCCGGGACCGTGGGTAACGGCAAAACGAGATTACTCGTATTCAGAAATATTGAGCATGACCAACAACTTTGCAAGATTGCTAGGTGAAGGTGGCTTTGGAAAAGTGTACTATGGTCGTATAGAAAACACCGAGGTGGCCGTAAAGATGCTCTCGGAAAAATCAGCTCAAGGCTATCAACAATTCCAGGCAGAGGTTGAGCTTCTTCTGAGAGTTCATCATAGAAACTTGACAAGCCTTATCGGATATTGTAATGAAGGGACCTCCATGGGGCTCATCTATGAATACATGGGAAGAGGAGATTTGGGAGAACTTATTTCTGGTCGTGAGGGAGGTACCTTGGGATGGAAAGATAGACTCCAGATAGCGGTAGATTCAGCTCAAGGGTTGGAGTATTTGCATTATGGGTGCAAGCCAGGCATAGTACATAGGGACGTGAAGTGTACAAACATCTTGTTGAACGAAAGTTTCCAAGCAAAGATAGCCGATTTTGGTCTCTCCAGAGCTTTTCCAATGGACGGCGGTGCCACCCACATCACAACCAATGTTGTTGGCACTCCCGGTTACCTTGACCCTGAGTACTACACAACATATAGATTAACTGAGAAGAGTGATGTTTACAGTTTTGGAGTCGTTTTATTGGAAATTATCACTGGCAGAGCAGTAATCACAAAAACCCACGAGAAGAGTCACATAAGTCAATGGGTTGACTTCAAGCTTGGTCAAGGAGATATCCGCACCATTGTTGATGCAAGATTAAGAGATGATTTTGATGGGAACTCCATTTGGAAAGCCGTTGAAGTAGCAATGTCTTGCGCGTCTCACAATTCTTCAAGACGGCCAACTATGAGTCTTGTCGTCACTGAGCTTAAGGAGTGTTTGGCTATTGAATTGGCTCGCTCAGAAGGTCGCCAAACAGATTCGATCTTAACTTCGTCCTCATCCGATTTCGCTTCTGAACTCGGTCCAACTGCAAGATAG 2679 44.08 MASQVKPFLFTLLATLPLISLVLAQSDQTGFISLDCGLTSNETYVEPITGLKYTTDAKYIDTGESNSVSSEYLTTSLKQQLATLRSFPDGVRNCYNISSVVKNTRYLIRASFLYANYDNRNFTPSFELHFGPNLWDSVTFEKVNTILHKEIIHIPSSNYIEICLVNTNDGDPFISSIELRPLLNDTYVTQGGASLSTFLRLDVASTTNDTYRYKDDAFDRIWSPAVPLAAWTTISTDLTIDRTSHIDLQPPRQVMVSAAIPKNASAPMEFNWAGPDTTTEFYVYMYFAEIQELSANQSRLFTIFLNGRPWLEENVRISYLNSNVVYSTLPISGGTYDFSLVRSNGSTLPPILNAIEIYSVIKFPLSETDQGDVGAMLNVKSDYGIKKNWQGDPCVPRDYIWEGVGCINSTDSDSPRINSLNLSSSGLIGQITSDIANLQLLEILDLSNNSLSGLVPDFLTQLSKLRFLNLGNNNFSGTISPGLTDKSSLTIIVDGNPNLGSTTNTTSNGKKKKSSVVGPVVGSVAGVIVVALIIVAAIFYFYKKNNPRGAVTTEIEAIRSTPNSQASPGPWVTAKRDYSYSEILSMTNNFARLLGEGGFGKVYYGRIENTEVAVKMLSEKSAQGYQQFQAEVELLLRVHHRNLTSLIGYCNEGTSMGLIYEYMGRGDLGELISGREGGTLGWKDRLQIAVDSAQGLEYLHYGCKPGIVHRDVKCTNILLNESFQAKIADFGLSRAFPMDGGATHITTNVVGTPGYLDPEYYTTYRLTEKSDVYSFGVVLLEIITGRAVITKTHEKSHISQWVDFKLGQGDIRTIVDARLRDDFDGNSIWKAVEVAMSCASHNSSRRPTMSLVVTELKECLAIELARSEGRQTDSILTSSSSDFASELGPTAR 892
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8898235 8902240 + Conep07aG0123300.1 Cone7ag1196 441792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1196 892 SMART serkin_6 588 860 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1196 892 CDD STKc_IRAK 594 858 - -
Cone7ag1196 892 Gene3D Ribonuclease Inhibitor 374 502 IPR032675 -
Cone7ag1196 892 FunFam Leucine-rich repeat receptor-like kinase 371 502 - -
Cone7ag1196 892 Pfam Leucine rich repeat 415 475 IPR001611 GO:0005515(InterPro)
Cone7ag1196 892 SUPERFAMILY Protein kinase-like (PK-like) 566 856 IPR011009 -
Cone7ag1196 892 FunFam Leucine-rich repeat receptor-like protein kinase 565 662 - -
Cone7ag1196 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1196 892 Gene3D Transferase(Phosphotransferase) domain 1 663 880 - -
Cone7ag1196 892 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 663 869 - -
Cone7ag1196 892 Gene3D Phosphorylase Kinase; domain 1 575 662 - -
Cone7ag1196 892 Pfam Protein tyrosine and serine/threonine kinase 590 855 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1196 892 Pfam Malectin-like domain 34 360 IPR024788 -
Cone7ag1196 892 ProSitePatterns Protein kinases ATP-binding region signature. 594 615 IPR017441 GO:0005524(InterPro)
Cone7ag1196 892 ProSiteProfiles Protein kinase domain profile. 588 860 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1196 892 SUPERFAMILY L domain-like 406 501 - -
Cone7ag1196 892 PANTHER OS07G0107800 PROTEIN-RELATED 24 864 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0941 Cone-Chr4:7887383 Cone7ag1196 Cone-Chr7:8898235 0 dispersed
Cone7ag1196 Cone-Chr7:8898235 Cone9ag0289 Cone-Chr9:1245040 1.92E-233 dispersed
Cone17ag0124 Cone-Chr17:648174 Cone7ag1196 Cone-Chr7:8898235 9.11E-94 wgd
Cone20ag1283 Cone-Chr20:8370029 Cone7ag1196 Cone-Chr7:8898235 1.42E-174 wgd
Cone4ag0940 Cone-Chr4:7847132 Cone7ag1196 Cone-Chr7:8898235 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83051 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1196 - - - 0.0