Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1209 ATGAAAAAAAGAAAAGGGGTTCATTCCATTATGAAGAAGAGAAATGTTTTGAGAAAGAAACACGTTCTTATGAAGAAGGGGAAGAAGAAGGAGGAGGAAGAGAAAGGCTCTCCTGATGGCGGAGAGAAGGTGGTTGTCGCCATAAAAGCGGCCAAAGAAATTCCCAAAGCTGCTTTGATGTGGGCCCTGGCCCATGTTGTTCAGCCCAATGATTCCATAACACTGCTCGTCGTCGTGCCGCCTCAAACTTCCGGTAGAAAATTTTGGAGCTTTCCCAGATTTTCTGGGGACTGTGCTAATAATAACAGAAAGTCTCATTCAGGAGCAAGATCTGAGCAGAAATGTGAGATAGCAGATTCATGTTCCCAAATGATCCTTCAGCTTCATAATGTTTATGATCCAAACAAGAAAAATGTTAGGATCAAAATTCTTTCGGGATCGCCCAATGGTGCAGTTGCTGCAGAGGTCAAGAAGGCTCAAGCCACCTGGGTTGTACTAGACAAGCACCTGAAAATTGAAGAGAAATGCTGCATGGAAGAGCTGCAATGCAACATCGTGGTTATGAAACGCTCCCAACCAAAAGTTCTCCGCCTGAATTTGGTGGGGTCCCCTCCAAAGAAGACTGAGGTTACCTCCATTCTATCCCACGCACTTGATGAGAAGTCCAAAAATGTGAATGAGAAATTGAACAATTCGCTTAATGCCATTTGTGCCCCAAAAGGAACTACCACTCCAAGTAGTAGTCCAGAATTAAGTACCCGATTTACTGCCACTGAAGCTGGAACCTCATCTGTATCAAGTTCTGATCCAGGAACTTCACCTCTCTTAATCTCTGAAATAAACAGAGATATTATGAAGAAAGAGGAAACATCAATAGTAGTACTCACCCAAGAAAATCATGAAAACAGATCCAATTCTGACTCGGAAAATGAAATTTTATCCACACCTTCTTTGAACTCTAGATACCAACCAAGGGTCAAAGAATTTTCACCTTCTCATAAACAATTACCGAAGATTGATAATACGACCGATATAGATTTCAGTGGAAGAAATGTACGGGAAGTGGTTTCTTTGTCAAGAAACATGCCGCCGGGCCCACCTCCCTTATGTTCCTTATGTCAACATAAGGCGCCAGTTTTTGGAAAGCCTCCAAGGTGGTTCAGTTATGCTGAGCTGGAGCTTGCTACTAATGGGTTTTCACAAGCGAACTTCTTGGCTGAAGGTGGGTTTGGATCTGTTCATAGAGGAGTACTGTCTGATGGTCAAATAGTAGCTGTTAAGCAGCATAAGCTGGCTAGCTCTCAGGGGGACCATGAATTTTGCTCGGAAGTAGAGGTTCTTAGCTGTGCTCAGCATCGGAATGTTGTCATGCTGATTGGCTTTTGTATCGAGGACAAAAGAAGATTACTGGTTTATGAATATATCTGTAATGGTTCACTGGATTTTCATCTATATGGACGGAAATGGGACCCACTAGAATGGTCTGCAAGGCAGAAAATAGCTGTGGGAGCTGCACGGGGACTGAGATATCTTCATGAAGAATGTAGAGTGGGGTGTATAGTCCATCGTGACATGCGGCCAAATAACATTCTTGTCACCCATGATTTCGAACCACTGGTTGGGGACTTTGGCCTGGCAAGGTGGCAGCCGAACGGAGATATGGCTGTTGAAACCAGAGTGATTGGAACCTTTGGGTATTTGGCTCCAGAGTATGCTCAAAGCGGCCAAATAACTGAAAAAGCTGATGTTTACTCCTTTGGGGTCGTCCTGGTTGAGCTAATCACAGGCCGAAAAGCAGTGGACCTTAAGCGACCCAAGGGCCAACAATGTCTTACTGAGTGGGCACGGCCTTTATTAGAAGCATTTTCCATGGATAAGCTGATGGACCCGAGGTTGGGGAATAGGTACTCCGAGCGTGAAGTCTACTGCATGGTCCATGCTGCTTCATCATGCATTCGACGCGATCCGAATGCTAGGCCCCGCATGTCTCAGGTGTTGCGAATTCTTGAAGGCGATATGGTCATGGATGGTAAATACATTTCAAAAAGAGGTAATGATGTGGGAAACAGGAGTGGGCGGATTTGGACCGAACAGCAACATCAACAACGTTATGCTCGTTTACTTTTGGACGATAATCAGAAGGTTTCGCTTGATGGTTTTAGACCTACTACTCGCTGGTGA 2181 44.66 MKKRKGVHSIMKKRNVLRKKHVLMKKGKKKEEEEKGSPDGGEKVVVAIKAAKEIPKAALMWALAHVVQPNDSITLLVVVPPQTSGRKFWSFPRFSGDCANNNRKSHSGARSEQKCEIADSCSQMILQLHNVYDPNKKNVRIKILSGSPNGAVAAEVKKAQATWVVLDKHLKIEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPPKKTEVTSILSHALDEKSKNVNEKLNNSLNAICAPKGTTTPSSSPELSTRFTATEAGTSSVSSSDPGTSPLLISEINRDIMKKEETSIVVLTQENHENRSNSDSENEILSTPSLNSRYQPRVKEFSPSHKQLPKIDNTTDIDFSGRNVREVVSLSRNMPPGPPPLCSLCQHKAPVFGKPPRWFSYAELELATNGFSQANFLAEGGFGSVHRGVLSDGQIVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDFHLYGRKWDPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPNGDMAVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLKRPKGQQCLTEWARPLLEAFSMDKLMDPRLGNRYSEREVYCMVHAASSCIRRDPNARPRMSQVLRILEGDMVMDGKYISKRGNDVGNRSGRIWTEQQHQQRYARLLLDDNQKVSLDGFRPTTRW 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8992308 8996932 + Conep07aG0124600.1 Cone7ag1209 441805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1209 726 ProSitePatterns Tyrosine protein kinases specific active-site signature. 520 532 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1209 726 Gene3D Phosphorylase Kinase; domain 1 371 474 - -
Cone7ag1209 726 MobiDBLite consensus disorder prediction 237 274 - -
Cone7ag1209 726 PANTHER OS01G0750732 PROTEIN 165 683 IPR050885 -
Cone7ag1209 726 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 371 474 - -
Cone7ag1209 726 ProSiteProfiles Protein kinase domain profile. 399 675 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1209 726 FunFam Dual-specific kinase DSK1-like 35 189 - -
Cone7ag1209 726 Gene3D Transferase(Phosphotransferase) domain 1 475 683 - -
Cone7ag1209 726 Pfam Protein kinase domain 403 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1209 726 MobiDBLite consensus disorder prediction 1 25 - -
Cone7ag1209 726 SUPERFAMILY Protein kinase-like (PK-like) 383 671 IPR011009 -
Cone7ag1209 726 MobiDBLite consensus disorder prediction 1 40 - -
Cone7ag1209 726 CDD STKc_IRAK 405 671 - -
Cone7ag1209 726 MobiDBLite consensus disorder prediction 26 40 - -
Cone7ag1209 726 Gene3D HUPs 27 174 IPR014729 -
Cone7ag1209 726 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 475 678 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1469 Cone-Chr1:57021031 Cone7ag1209 Cone-Chr7:8992308 1.81E-93 dispersed
Cone4ag1445 Cone-Chr4:11471892 Cone7ag1209 Cone-Chr7:8992308 1.01E-99 dispersed
Cone4ag1878 Cone-Chr4:13429540 Cone7ag1209 Cone-Chr7:8992308 2.31E-179 dispersed
Cone7ag1209 Cone-Chr7:8992308 Cone7ag1787 Cone-Chr7:11729437 1.62E-113 dispersed
Cone17ag0111 Cone-Chr17:581592 Cone7ag1209 Cone-Chr7:8992308 0 wgd
Cone20ag1297 Cone-Chr20:8447839 Cone7ag1209 Cone-Chr7:8992308 0 wgd
Cone4ag0787 Cone-Chr4:4700713 Cone7ag1209 Cone-Chr7:8992308 5.39E-252 wgd
Cone4ag0931 Cone-Chr4:7749425 Cone7ag1209 Cone-Chr7:8992308 0 wgd
Cone7ag0733 Cone-Chr7:4436877 Cone7ag1209 Cone-Chr7:8992308 2.55E-227 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83052 PF05003 DUF668 3.60E-33 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1209 - - - 0.0