Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1229 ATGACTAGTAGAAGAAGGTCTAGGTTCGGGCCGAGCCATTTCTACACCTTTTCATGCCTGAGACCACAAACCAGTGAATCAGAGGCCCCAAATCAAACCCATAGTCCTGGATTTTCCCGAACAGTTCATTGCAACCAACCAAATCTCCATCAGAAGAAGCCATTGAAATACTGCTCGAATTTCATTTCAACCACTAAGTACAATGTACTTACCTTCTTGCCCAAGGCTCTTTTCGAGCAATTCAGGCGTGTGGCTAACTTGTACTTTCTTTTAGCAGCAATTCTCTCTTTCACACCAGTCACACCCTTCTCCCCCATGAGCATGATGGCCCCTTTAGCCTTTGTGGTTGGACTAAGTATGGCCAAAGAAGCCTTAGAAGACTGGCGCCGTTTTGTCCAAGATATGAAGGTGAATCTTAGAAAAGCTTATGTTCATAAAGGTGAAGGGATTTTCGGGTATAGACCATGGCATAAGATTCGGGTTGGAGATGTTGTCAAAGTTGAAAAGGACCAATTCTTTCCGGCTGATTTGCTTCTCTTATCGTCTAGTTATGAAGATGGTATTTGTTATGTAGAGACTATGAATTTAGATGGGGAGACTAATTTGAAAGTGAAGAGATCATTAGAAGTGACATTGTCTTTAGATGATGATGAGTCTTTCAAGGGGTTTTCGGGAAAGATCCAATGTGAAGATCCCAACCCAAATCTTTACACCTTTGTGGGTAATCTTGAATATGATCTTCAAGTTTATTCTCTTGACCCTAATCAGATTCTCTTAAGAGATTCAAAGCTTAGGAATACTAGTTATGCTTATGGGGTGGTGATATTTACAGGCCATGATAGCAAAGTGATGCAAAATGCAACGAAATCACCTTCTAAAAGAAGTGGGATAGAAAGAAAAATGGATAAAATCATTTACATCCTTTTCACCCTTCTTGTAACGATCTCATTGATAAGCTCTATTGGTTTTGCCATCAAAACAAAGTACCAAATGCCGGATTGGTGGTACTTAATGCCTGAAAATACCAGTAATTTATACGATCCAAAAAGGCCAGCATTGTCTGGCCTTTTCCATCTAATTACTGCCCTTATTCTTTACGGATATTTAATACCCATCTCACTCTATGTCTCAATAGAAGTTGTCAAGGTTTTACAAGCCATGTTCATTAACCAAGATATTCACATGTATGATGAAGAGAGTGGAAATCCAGCACAGGCAAGGACCTCAAATTTGAATGAGGAGTTGGGTCAAGTAGATACAATCCTTTCTGATAAAACCGGAACTTTGACTTGCAATCAGATGGATTTTCTCAAGTGTTCAATTTCCGGGATTGCTTATGGTGTTCGCTCTAGTGAAGTGGAACTTGCTGCTGCCAAGCAAATGGCTATTGACCATGAAGAGATTGAGCCGGACTTTTCGAATTTTCCAATGCAATCTAAGAAGGGGAAAAAAGGGTCTGAAATTGAATTGCAAGAAGTAATCACTTCTGGGGGTGGTAATGGAAAAGATCAGAAAGTTTCCATAAAGGGTTTTAGTTTTGAGGACAATCGACTAATGGGTGGGAATTGGATTAAAGAGGCGAATCCCAATTTCATCTTATTGTTTTTCCGAATATTAGCAATTTGTCACACTGCAATTCCTGAGCATAATGATGAGACAGGTGAATTTACTTATGAAGCGGAGTCACCAGATGAAGCCGCTTTTCTTGTTGCTGCTAGAGAATTTGGGTTTGAATTTTGTAAAAGGACTCAATCCACTTTGGTCGTCCGGGAAAAATATTCTCTATCTGGAGAAGCAGTTGAGAGGGAATACAAAATTTTGAATCTCTTGGACTTTACTAGCAAAAGAAAGCGAATGTCAGTGATCATTCGGGATGAAGACGGGCAAATCTTTCTTCTTTGCAAAGGAGCCGACAGCATTATTTTTGACCGGTTGGCAAAGAATGGAAGAATGTACGAAGAAGCCACAACCAGGCACTTGAATGAATATGGAGAGGCTGGTTTAAGGACATTAGCCCTTGCTTATAAGAAGCTCGAGGAATCTGAGTATGCAAGTTGGAATGATGAGTTTCAGAAAGCTAAAACGACAATAGGGGGTGATAGGGAGGGTATGCTTGAAAAAGTATCTGATATGATGGAAAGAGAGTTGATCCTTGTAGGTGCTACTGCTGTGGAGGACAAGTTGCAAAAAGGGGTGCCACAATGCATAGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTTTTGACTGGAGATAAAATGGAAACTGCTGTCAACATAGGATTTGCATGTAGTCTACTACGACAGGGCATGAAGCAGATTTGTATAACATCCAATGTAGAGACAATAGCGCAAGATGGCAAATCGGACTTGAAAGACAATATTTCAAATCAAATAACCAATGCCTCACAAATGATCAAGTTAGAGAAGGACCCACATGCCGCATTTGCTTTAATTATTGACGGGAAAACTCTAACATATGCTCTAGAGGATGGTATGAAGCATCAGTTTCTCGGTTTAGCTGTTGATTGTGCTTCTGTTATTTGCTGTCGTGTCTCTCCCAAGCAGAAAGCTCTGGTTACTAGATTAGTAAAAGAAGGTACGGGTAAAACTACTTTGGCAATAGGTGATGGTGCAAATGATGTCGGAATGATTCAAGAGGCTGATATTGGTGTTGGTATTAGTGGGGTTGAAGGCATGCAGGCTGTGATGGCTAGTGATTTCTCTATTGCCCAATTTCGGTTTTTGGAGAGGCTTTTGGTAGTTCACGGACACTGGTGCTATAAGAGGATTGCCCAGATGATTTGTTATTTCTTCTACAAGAACATAGCATTTGGTCTTACCCTCTTTTACTTTGAGGCATTTACGGGCTTCTCTGGACAATCGATTTATGATGACTACTACATGCTTTCATTTAATGTCATTCTTACCTCTTTGCCCGTCATTTCGCTTGGTGTTTTCGAGCAAGATGTTTCTTCTGAGGTCTGCTTACAGTTTCCCGCCTTATATCAACAAGGACCAAAAAACCTGTTCTTCGACTGGTACCGGATATTCGGGTGGATGGGGAACGGTCTCTACTCCTCCTTAATCACATTCTTCCTCAACATCATAATCTTCTACAACCAAGCCTTCCGTGCCAGGGGCCAGACGGCTGACATGGCAGCCGTTGGGACCACCATGTTCACATGCATTATCTGGGCTGTCAATTGCCAGATTGCCCTCACCATGAGCCACTTCACATGGATCCAACACCTCTTTGTCTGGGGCAGCATTGCTATGTGGTACCTCTTCATCCTCCTCTACGGCATGATCATCTCTTCCGGGGACGCCTACCAGATTCTCATCGAGGCTTTGGGCCCTGCCCCTATTTATTGGGTAACCACCTTGTTGGTTACGGTTGTTTGTAATCTACCGTATTTGGCGCACATTTCTTACCAAAGATGTTTCAATCCTATGGACCATCATATTATCCAAGAGATCAAGTATTACAGGAAAGATGTGGAGGATCAGCATATGTGGACCCGTGAACGGTCGAAAGCAAGGCAGAAGACCAAGATCGGGTTCACGGCTAGGGTCGATGCCAAGATCAGACATCTGAGAGGAAAGCTTCAGAAGAAGCATTCTTCCTTTGCCGAGCATAATGTGGTCCCCGTTTCTTGA 3660 41.99 MTSRRRSRFGPSHFYTFSCLRPQTSESEAPNQTHSPGFSRTVHCNQPNLHQKKPLKYCSNFISTTKYNVLTFLPKALFEQFRRVANLYFLLAAILSFTPVTPFSPMSMMAPLAFVVGLSMAKEALEDWRRFVQDMKVNLRKAYVHKGEGIFGYRPWHKIRVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDDESFKGFSGKIQCEDPNPNLYTFVGNLEYDLQVYSLDPNQILLRDSKLRNTSYAYGVVIFTGHDSKVMQNATKSPSKRSGIERKMDKIIYILFTLLVTISLISSIGFAIKTKYQMPDWWYLMPENTSNLYDPKRPALSGLFHLITALILYGYLIPISLYVSIEVVKVLQAMFINQDIHMYDEESGNPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSISGIAYGVRSSEVELAAAKQMAIDHEEIEPDFSNFPMQSKKGKKGSEIELQEVITSGGGNGKDQKVSIKGFSFEDNRLMGGNWIKEANPNFILLFFRILAICHTAIPEHNDETGEFTYEAESPDEAAFLVAAREFGFEFCKRTQSTLVVREKYSLSGEAVEREYKILNLLDFTSKRKRMSVIIRDEDGQIFLLCKGADSIIFDRLAKNGRMYEEATTRHLNEYGEAGLRTLALAYKKLEESEYASWNDEFQKAKTTIGGDREGMLEKVSDMMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAVNIGFACSLLRQGMKQICITSNVETIAQDGKSDLKDNISNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDGMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDYYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIFGWMGNGLYSSLITFFLNIIIFYNQAFRARGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIAMWYLFILLYGMIISSGDAYQILIEALGPAPIYWVTTLLVTVVCNLPYLAHISYQRCFNPMDHHIIQEIKYYRKDVEDQHMWTRERSKARQKTKIGFTARVDAKIRHLRGKLQKKHSSFAEHNVVPVS 1219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9118286 9124516 + Conep07aG0126600.1 Cone7ag1229 441825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1229 1219 CDD P-type_ATPase_APLT_Dnf-like 59 1034 - -
Cone7ag1229 1219 SUPERFAMILY HAD-like 410 919 IPR036412 -
Cone7ag1229 1219 NCBIfam phospholipid-translocating P-type ATPase 57 1159 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone7ag1229 1219 SFLD C1.7: P-type atpase like 405 926 - -
Cone7ag1229 1219 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 681 IPR023299 GO:0000166(InterPro)
Cone7ag1229 1219 NCBIfam HAD-IC family P-type ATPase 847 956 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1229 1219 Pfam Phospholipid-translocating P-type ATPase C-terminal 903 1151 IPR032630 -
Cone7ag1229 1219 Gene3D - 116 289 - -
Cone7ag1229 1219 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 27 1165 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone7ag1229 1219 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Cone7ag1229 1219 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1141 IPR023298 -
Cone7ag1229 1219 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Cone7ag1229 1219 SFLD p-type atpase 405 926 IPR044492 -
Cone7ag1229 1219 FunFam Phospholipid-transporting ATPase 586 717 - -
Cone7ag1229 1219 Gene3D - 564 717 IPR023299 GO:0000166(InterPro)
Cone7ag1229 1219 Pfam Cation transport ATPase (P-type) 541 645 - -
Cone7ag1229 1219 FunFam Phospholipid-transporting ATPase 118 288 - -
Cone7ag1229 1219 FunFam Phospholipid-transporting ATPase 719 915 - -
Cone7ag1229 1219 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Cone7ag1229 1219 PRINTS P-type cation-transporting ATPase superfamily signature 875 894 - -
Cone7ag1229 1219 Gene3D - 718 915 IPR023214 -
Cone7ag1229 1219 SUPERFAMILY Calcium ATPase, transduction domain A 148 287 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0871 Cone-Chr13:7765056 Cone7ag1229 Cone-Chr7:9118286 0 dispersed
Cone6ag0484 Cone-Chr6:2412016 Cone7ag1229 Cone-Chr7:9118286 0 dispersed
Cone7ag1229 Cone-Chr7:9118286 Cone8ag0629 Cone-Chr8:6217396 0 dispersed
Cone4ag0922 Cone-Chr4:7520532 Cone7ag1229 Cone-Chr7:9118286 0 transposed
Cone17ag0092 Cone-Chr17:486617 Cone7ag1229 Cone-Chr7:9118286 0 wgd
Cone4ag0921 Cone-Chr4:7517226 Cone7ag1229 Cone-Chr7:9118286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1229 K01530 - csv:101221220 2026.52