Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1233 ATGTTAATAGAAAACAGGAAAGTGTTAATGGAAGAGATGTCTCCAGCAGTTTCCTTGACACTTAGTTTAGGCAATCCAAAGAGTGATAATAGCTCAGCAAACATAACCCATGTAGGAATCACACACCTCAAGCTGGTAACAGATATTTCAGCGCTCAATGGAACTTCATTCGATCTCAAGAACGAAGTTAAAAGCATGATTTCACCAGAAACTAATGATTTGATCTCTAACGATGCCATTGTCCCTGAAGCCAAAGATGATGAAATCTTATCTTCCATGGAAGTTACTAATTCGGTTATAAACAGTGAACAGTTGTTAGATCCTGATGTTAGGTCTCAATTAAGCTTTCCAGACGTCATGGTTATCGGGAATGTTGGAGAGGGTCCACCTGTTGCCAAGGCTATTATTTTAACTGAATCAGGTAAGTTACCTTCTAGTGAAATTATTTTGGCAGCAGTAAGCTCAGATTTGGAGATAGCTGCTAAATCAGATGTAAAGGTTCCAAGGGTGGTATTGGAGAGTGTTGGTAGAGGGATCCGTAGTGTCTTTGAGAAGGAATGTGTTCCGCTTTGGGGCTCTGTATCGATTTGTGGAGGAAGGCCCGAAATGGAAGACGCTATTGCTGCTGTGCCTTATTTTATGAAGCTTCCTATTGGAATGCTCGTAGGGAATCATGTGATTGATGGAATGAGCCAAAATCTGACGCACTTGACCAGTCATTTCTTTGGTGTTTATGATGGCCATGGGGGCTCTCAGGTTGCTAATTACTGCTGTGAACGAGTGCATTTGGCTTTGGCTGAAGAGATTGGTAAAGTGAAAGCCGGTTCGAGTTTTGAGAATATTGTGGAAAACAACTGGCAGGAGCAATGGGAAAAAGCCTTCACTAATAGCTTTATGAAAGTTGATGATGAGGTTGGAGGAAAAAGTTATAACAATGAAGATTCTTCAGATGATACTGGCTTTGAGCTTGTTGTCCCCGAAACCGTGGGGTCCACTGCCGTTGTTGCCTTGGTCTGTTCATCGCATATTATAGTTGCAAACTGTGGCGACTCCAGAGCCGTCTTGTGTCGTGGGAAAGAATCCATTGCTTTATCTGTTGACCATAAACCAAGTAGAGAAGATGAGTATGCAAGAATTGAGGCGTCTGGCGGCAAGGTCATACAGTGGAACGGTCTTCGTGTTTTTGGAGTTCTTGCAATGTCAAGGTCCATAGGTGATAGATATTTGAAACCATGGATTATTCCGGATCCTGAGGTAATGTTTGTTCCCCGGGCTCGGGATGATGAATGTCTGATTCTAGCAAGTGATGGTTTATGGGATGTCATTACAAACGAAGAAGCTTGTGAAGTGGCTCGAAGAAGGATTTTGCTCTGGCATAGGAAAAATGGGTCCACATCACTCGGGGAAAGGGGTTGGGTGATAGATCCTGCTGCTCAAGCAGCTGCTGATTATCTTTCGATGCTTGCCATTCAAAAGGGAAGCAAAGATAACATTTCTGTGATTGTGGTGGACTTGAAAGCACAGAGAAAGTTCAAGATCAAATCCTGA 1548 42.83 MLIENRKVLMEEMSPAVSLTLSLGNPKSDNSSANITHVGITHLKLVTDISALNGTSFDLKNEVKSMISPETNDLISNDAIVPEAKDDEILSSMEVTNSVINSEQLLDPDVRSQLSFPDVMVIGNVGEGPPVAKAIILTESGKLPSSEIILAAVSSDLEIAAKSDVKVPRVVLESVGRGIRSVFEKECVPLWGSVSICGGRPEMEDAIAAVPYFMKLPIGMLVGNHVIDGMSQNLTHLTSHFFGVYDGHGGSQVANYCCERVHLALAEEIGKVKAGSSFENIVENNWQEQWEKAFTNSFMKVDDEVGGKSYNNEDSSDDTGFELVVPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKESIALSVDHKPSREDEYARIEASGGKVIQWNGLRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRARDDECLILASDGLWDVITNEEACEVARRRILLWHRKNGSTSLGERGWVIDPAAQAAADYLSMLAIQKGSKDNISVIVVDLKAQRKFKIKS 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9143732 9147591 + Conep07aG0127000.1 Cone7ag1233 441829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1233 515 FunFam Protein phosphatase 2C 16 178 515 - -
Cone7ag1233 515 SUPERFAMILY PP2C-like 180 506 IPR036457 -
Cone7ag1233 515 ProSitePatterns PPM-type phosphatase domain signature. 241 249 IPR000222 GO:0043169(InterPro)
Cone7ag1233 515 PANTHER PROTEIN PHOSPHATASE 161 504 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone7ag1233 515 ProSiteProfiles PPM-type phosphatase domain profile. 190 505 IPR001932 -
Cone7ag1233 515 Gene3D - 177 515 IPR036457 -
Cone7ag1233 515 SMART PP2C_4 180 503 IPR001932 -
Cone7ag1233 515 Pfam Protein phosphatase 2C 219 498 IPR001932 -
Cone7ag1233 515 CDD PP2Cc 192 505 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0937 Cone-Chr17:7332025 Cone7ag1233 Cone-Chr7:9143732 2.17E-161 dispersed
Cone4ag0049 Cone-Chr4:245356 Cone7ag1233 Cone-Chr7:9143732 2.64E-52 dispersed
Cone7ag0047 Cone-Chr7:202661 Cone7ag1233 Cone-Chr7:9143732 5.84E-56 dispersed
Cone7ag1233 Cone-Chr7:9143732 Cone9ag0849 Cone-Chr9:4151370 2.73E-65 dispersed
Cone20ag0280 Cone-Chr20:1254286 Cone7ag1233 Cone-Chr7:9143732 1.13E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1233 K14497 - csv:101203499 628.246