Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1234 ATGTGTCTAACTGCAACCGCGGAGGAGGAATCATCGCGAGAAATTCACCTCCCAGCCGAAATCGACTGGCATATGCTCGACAAATCAAAGTTCTTCTTCCTCGGCGCGGCTCTCTTCTCAGGCGTATCCGCATCTCTCTACCCCATCGTCGTGCTAAAAACCAGGCAACAAGTAGCCCAATCGCAGCTCTCCTGCATCAAAACCGCCATCTCCATAGTCCGATACGAAGGATTCCGTGCTCTCTACAGAGGCTTCGGAACTTCACTAATGGGCACAATCCCCGCTCGAGCTCTCTACATGGGCGCGCTAGAGGTCACAAAGAGCAACGTGGGGACCACAACTCTTAAATTAGGGTTTTCAGAGACCACAGCGGCAACGATCGCAAACGCCGCCGCCGGATTAAGCGCATCCGTGGCGGCTCAGCTCGTCTGGACACCTGTGGACGTAATCAGCCAAAGACTAATGGTTCAAGGCGGATCGAATCCCACAATTCCAAACGCATCAACGTGTAAATATGTCAACGGAGTCGACGCGTTTAGGAAGATTCTACACACTGATGGATTTAGAGGCCTTTACAGAGGATTCGGAATCTCGATTCTAACTTACGCCCCCTCAAACGCCGTTTGGTGGGCGTCGTATTACGTTGCGCAGAGACTGGTTTGGACCGGAATTGGAGATTACCGTGAGAGTTACTACAGACCGGATTCGCGAACCGTTATGGTGGTTCAGGGAGCTAGTGCGGCGATGGCTGGAGGAATGTCGGCTCTGATTACTATGCCGCTTGATACGATAAAGACGAGGCTGCAGGTTTTGGATGGGGATGAAAATGGCCGGCGTGGTGGTGGTGGTGGTGGTGGGCCTGGGCCAGGGCCAAGTTTTGGACAGACGGCCCGGAATTTGGTAAAGGAAGGCGGATGGATGGCCTGTTATAGAGGATTAGGGCCGAGGTGGGCTTCTATGTCCGTGTCTGCTACGACCATTATTACTACTTACGAGTTTCTTAAACGGCTCTCTACAAAGAATCAGGAGGGGTTTTCTACCGCATGA 1047 52.53 MCLTATAEEESSREIHLPAEIDWHMLDKSKFFFLGAALFSGVSASLYPIVVLKTRQQVAQSQLSCIKTAISIVRYEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNVGTTTLKLGFSETTAATIANAAAGLSASVAAQLVWTPVDVISQRLMVQGGSNPTIPNASTCKYVNGVDAFRKILHTDGFRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWTGIGDYRESYYRPDSRTVMVVQGASAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGGGGGGGPGPGPSFGQTARNLVKEGGWMACYRGLGPRWASMSVSATTIITTYEFLKRLSTKNQEGFSTA 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9152009 9153742 + Conep07aG0127100.1 Cone7ag1234 441830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1234 348 PRINTS Mitochondrial carrier protein signature 82 100 IPR002067 GO:0055085(InterPro)
Cone7ag1234 348 PRINTS Mitochondrial carrier protein signature 133 155 IPR002067 GO:0055085(InterPro)
Cone7ag1234 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
Cone7ag1234 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 343 - -
Cone7ag1234 348 Pfam Mitochondrial carrier protein 126 220 IPR018108 -
Cone7ag1234 348 Pfam Mitochondrial carrier protein 37 110 IPR018108 -
Cone7ag1234 348 Pfam Mitochondrial carrier protein 241 340 IPR018108 -
Cone7ag1234 348 MobiDBLite consensus disorder prediction 273 295 - -
Cone7ag1234 348 Gene3D Mitochondrial carrier domain 30 346 IPR023395 -
Cone7ag1234 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 337 IPR018108 -
Cone7ag1234 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 219 IPR018108 -
Cone7ag1234 348 SUPERFAMILY Mitochondrial carrier 25 334 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0356 Cone-Chr11:1743377 Cone7ag1234 Cone-Chr7:9152009 5.81E-85 dispersed
Cone18ag1144 Cone-Chr18:8246994 Cone7ag1234 Cone-Chr7:9152009 4.52E-87 dispersed
Cone4ag1686 Cone-Chr4:12570440 Cone7ag1234 Cone-Chr7:9152009 2.39E-159 dispersed
Cone7ag1234 Cone-Chr7:9152009 Cone9ag1478 Cone-Chr9:10908961 3.11E-11 dispersed
Cone7ag1234 Cone-Chr7:9152009 Cone7ag1604 Cone-Chr7:10937352 3.30E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1234 K15121 - mdm:103454564 495.738