Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1260 | ATGGCTCTAGAAACTGTGGTCTACCCTCAAGACAGTACGTCTACTACAACAAGCACAATATTCAGCTGCGGTATCAAGAACGTCTTCTCCGCATCATCCGGGGGAGGATTCTCCGGCAGCGGCGTCTGGGGTAATATCGATCATCACCATCTCACAGACATGGAAATTGCTATTCATGATCAGGTGTATGTGAAGGATAAGTACTATAACGATCAGTACTTGCCCTATTCTAATTACTCTTCACCTGATCAAAATCTCCTGCAAGTTCCAGCACCTGACGTGGATGAGCTCCTCTGGCCTTCGTTTACGGAGTCACCAGCTCCAGCAAGATCAGTACTATTCACATCGACCGGTAGCAGTAGTAGTAGAAGGAGGAAAAGAAGGAGGTGCAATAAGAGCACGAAGGACAAGGAACAGATGGAGAATCAAAGGATGACTCACATTGTAGTGGAGAGAAACCGCCGCAAGCAGATGAATCACTACCTTGCCCATCTCCGCTCCTTGATGCCTCCTTCTTACGTTCAAAGGGGTGACCAAGCATCTATTATAGGGGGGGCAATTAATTTTGTGAAACAGCTAGAGCAGCACTTGCAATTCATTCAGGCCCATAAGTACTTACAACAACCACTTGATCATCATCATCTCCCATCTGATCCATTTGCTGAGTTCTTCACCTTCCCGCAGTACTCGACACGAGCATCAACTTCTCCGACCAAAGAGGAGGAAGAGGAGCCACCGCTCTTTGCGGCAGATATTGAAGTCACGATGTCGGACAGCCATGCAAACCTTAAAATACAGTCTAAAAAACAGCCTAAGCAGCTGTTGAAGCTGGTTGTTGGGCTTCAGAGCTTGAGGCTTAGTGTTCTTCACCTTAATGTTACCACCACCCCGGATCAAATAGTCCTCTACTCATTTAGTGTTAAGGTAGAAGAAGAGTGCCAACTGAGTACAAAGGATGACATAGCAGCGGCAGTTAATCAAATGATACATGCAATTAATCAAAAGGAGGTTACTTTCAGCTAA | 1023 | 45.94 | MALETVVYPQDSTSTTTSTIFSCGIKNVFSASSGGGFSGSGVWGNIDHHHLTDMEIAIHDQVYVKDKYYNDQYLPYSNYSSPDQNLLQVPAPDVDELLWPSFTESPAPARSVLFTSTGSSSSRRRKRRRCNKSTKDKEQMENQRMTHIVVERNRRKQMNHYLAHLRSLMPPSYVQRGDQASIIGGAINFVKQLEQHLQFIQAHKYLQQPLDHHHLPSDPFAEFFTFPQYSTRASTSPTKEEEEEPPLFAADIEVTMSDSHANLKIQSKKQPKQLLKLVVGLQSLRLSVLHLNVTTTPDQIVLYSFSVKVEEECQLSTKDDIAAAVNQMIHAINQKEVTFS | 340 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9361322 | 9362549 | + | Conep07aG0129700.1 | Cone7ag1260 | 441856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1260 | 340 | PANTHER | MAX DIMERIZATION, MAD | 107 | 328 | - | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cone7ag1260 | 340 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 141 | 205 | IPR036638 | GO:0046983(InterPro) | |
Cone7ag1260 | 340 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 142 | 193 | IPR011598 | GO:0046983(InterPro) | |
Cone7ag1260 | 340 | Coils | Coil | 123 | 143 | - | - | |
Cone7ag1260 | 340 | MobiDBLite | consensus disorder prediction | 110 | 142 | - | - | |
Cone7ag1260 | 340 | Gene3D | - | 131 | 215 | IPR036638 | GO:0046983(InterPro) | |
Cone7ag1260 | 340 | Pfam | Helix-loop-helix DNA-binding domain | 143 | 194 | IPR011598 | GO:0046983(InterPro) | |
Cone7ag1260 | 340 | ProSiteProfiles | ACT domain profile. | 262 | 340 | IPR002912 | - | |
Cone7ag1260 | 340 | SMART | finulus | 148 | 199 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0750 | Cone-Chr3:3894037 | Cone7ag1260 | Cone-Chr7:9361322 | 1.24E-56 | dispersed | |
Cone4ag1316 | Cone-Chr4:10820470 | Cone7ag1260 | Cone-Chr7:9361322 | 1.67E-183 | dispersed | |
Cone5ag0020 | Cone-Chr5:133301 | Cone7ag1260 | Cone-Chr7:9361322 | 1.48E-62 | dispersed | |
Cone7ag0388 | Cone-Chr7:1711919 | Cone7ag1260 | Cone-Chr7:9361322 | 1.71E-35 | dispersed | |
Cone17ag1201 | Cone-Chr17:8768360 | Cone7ag1260 | Cone-Chr7:9361322 | 5.06E-80 | wgd | |
Cone20ag0528 | Cone-Chr20:2865702 | Cone7ag1260 | Cone-Chr7:9361322 | 1.18E-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46540 | PF04548 | AIG1 | 2.70E-79 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1260 | - | - | - | 0.0 |