Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1266 ATGGCCGTCGCTCCTTCAGCTCGCGAAGAGAACGTGTACATGGCCAAGCTCGCTGAGCAAGCTGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCAGCCGCCGTCGGGAAGGAGGAGCTCTCCGTCGAGGAGAGAAATCTCCTCTCCGTTGCCTACAAGAATGTGATAGGCGCTCGAAGGGCCTCGTGGCGTATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGTGGAAATGATGACCACGTCTCCGTGATCCGTGACTACAGATCTAAGATCGAGAACGAGCTCTCTAACATCTGTGACGGGATCCTCAAGCTCCTTGACTCCCGGCTCATTCCCTCGGCTTCGGCAGGAGATTCCAAGGTTTTTTACCTGAAGATGAAGGGCGATTACCATAGGTACCTTGCTGAGTTCAAGACTGGAGCTGAGCGCAAGGTGGCCGCTGAGAGTACACTCAACGCTTACAAATCAGCTCAGGATATCGCAACTTCCGAACTTGCTCCCACCCATCCCATCAGACTTGGACTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTCTGAACTCTCCTGACCGAGCCTGTAACCTTGCAAAACAGGCTTTTGATGAAGCTATTGCTGAATTGGACACTCTGGGCGAGGAATCGTACAAGGATAGCACTTTGATCATGCAGCTTCTTCGTGATAACCTCACACTGTGGACCTCTGATATGCAGGATGATGGGGCAGATGAAATTAAAGTAGCTCCCAAAACTGAAGAAGAACAAAAGTGA 783 51.21 MAVAPSAREENVYMAKLAEQAERYEEMVEFMEKVSAAVGKEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIENELSNICDGILKLLDSRLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKVAAESTLNAYKSAQDIATSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKVAPKTEEEQK 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9413986 9415877 - Conep07aG0130300.1 Cone7ag1266 441862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1266 260 Gene3D - 2 253 IPR036815 -
Cone7ag1266 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cone7ag1266 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cone7ag1266 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cone7ag1266 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cone7ag1266 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cone7ag1266 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cone7ag1266 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Cone7ag1266 260 Coils Coil 14 34 - -
Cone7ag1266 260 PIRSF 14-3-3 2 250 IPR000308 -
Cone7ag1266 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cone7ag1266 260 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone7ag1266 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cone7ag1266 260 SMART 1433_4 8 251 IPR023410 -
Cone7ag1266 260 FunFam 14-3-3 protein epsilon 3 251 - -
Cone7ag1266 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1307 Cone-Chr4:10760468 Cone7ag1266 Cone-Chr7:9413986 4.64E-124 dispersed
Cone7ag1266 Cone-Chr7:9413986 Cone8ag0206 Cone-Chr8:1113875 8.56E-124 dispersed
Cone17ag1206 Cone-Chr17:8795615 Cone7ag1266 Cone-Chr7:9413986 9.38E-160 wgd
Cone20ag0521 Cone-Chr20:2823921 Cone7ag1266 Cone-Chr7:9413986 2.21E-160 wgd
Cone4ag1325 Cone-Chr4:10869838 Cone7ag1266 Cone-Chr7:9413986 4.98E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1266 K06630 - vvi:100257548 469.544