Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1271 ATGCCGTGCTATAGCTGTGAAGAAGAGTTCAAGAACAACATAGGGCAACCAAAAGCAAAGCCCTTGATAGATTTTAGAACTCTGCAAACACACTACAAGAGAAAGAATGGGAGCAAGCCATTTAAGTGTGGTAAGTTGTTGGCTGGGAAGGGTGATTGGAGAACCCATGAGAAGAATTGTGGCAAGCTTTGGCTCTGCGTGTGTGGGTCCGACTTCAAGCATAAGAGGTCTCTTAAGGATCATGTGAAAGCTTTTGGATGTGGTTTTAATCACTTCCCACTTTCTTGTTAA 291 43.3 MPCYSCEEEFKNNIGQPKAKPLIDFRTLQTHYKRKNGSKPFKCGKLLAGKGDWRTHEKNCGKLWLCVCGSDFKHKRSLKDHVKAFGCGFNHFPLSC 96
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9434418 9434708 - Conep07aG0130900.1 Cone7ag1271 441867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1271 96 PANTHER ZINC FINGER PROTEIN WIP2 1 91 IPR043584 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(InterPro)|GO:0010468(PANTHER)|GO:0048856(PANTHER)
Cone7ag1271 96 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 42 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0465 Cone-Chr6:2295739 Cone7ag1271 Cone-Chr7:9434418 3.68E-47 dispersed
Cone7ag1271 Cone-Chr7:9434418 Cone9ag0477 Cone-Chr9:2278423 2.43E-47 dispersed
Cone4ag1330 Cone-Chr4:10887574 Cone7ag1271 Cone-Chr7:9434418 3.06E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46541 PF00254 FKBP_C 2.80E-17 CL0487 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1271 - - - 0.0