Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1274 ATGGAGGCTTCAGATGAGAGAGAGAGAAGGAGAAAGAGTGACGGCGAAAGGGGTAGTGGAGAAAATTGGTGGAGGAAGTTGAAGGAGCCGGAAGCTGACATGGAGGATCCACAAGGGGGAAAGAGTAAGGGAGAAGAGGAAGTGCTTGGGTCGAGCTTAACGATGGAGAAGGTGGCTGCGGCGAAGAAGTTTATAGAGAACCACTACAGAGCTCAGATTAAGAACATTCAGGAACGGAAAGAGAGAAGATGGGTGTTAGAGAGAAGACTTGCATCATCTGACGTGCCTAAAGAAGAGCAGATCAACCTTATTAAAGATCTAGAGAGGAAAGAGACAGAGTTTATGCGGCTCAAAAGGCACAAGATATGCGTAGATGATTTTGAGCTATTAACCATCATTGGAAGGGGGGCATTTGGTGAGGTTCGATTGTGTCGGGAGAAGAAATCTGGCAATATATATGCCATGAAGAAACTGAAGAAGTCCGAAATGGTTAAAAGAGGACAGGTGGAACACGTTAGAGCGGAGAGAAATTTGCTAGCAGAAGTTGCCTGTCATTGCATAGTGAAACTTTACTACTCATTTCAGGACACAGAGTACTTGTATTTGATCATGGAATACCTTCCAGGTGGTGATGTGATGACTCTACTGATGAGAGAAGACACATTAACTGAAAGCGTGGCTAAGTTTTACATGGCTCAAAGTGTCCTCGCAATAGAATCTATTCACAAGCACAACTACATTCACAGAGATATTAAACCAGACAACCTTCTTCTGGACAAAAATGGTCACATGAAGCTCTCGGACTTTGGTCTATGTAAACCCCTTGATTGTTCAACCCTATCAACGCTGCATGAAAATAAAACCATAGATGATGAAAATTCGGCAGAACCAATGGAAATTGACAGTGTCCCGGATGCTTCCAATCAGCCTATTTGGAAAAGCCCTCTTGAGCAGCTTCAGCACTGGCAGAGGAACCGGCGGAAGTTGGCATTTTCAACTGTTGGGACACCAGATTATATCGCCCCGGAAGTATTACTGAAAAAGGGATATGGGATGGAATGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTTGTAGGTTACCCTCCGTTTTATTCAGATGACCCAATCACCACCTGCAGAAAGATTGTTCATTGGAAAAATCACTTAACATTCCCAGAAGATGCAAAGCTGTCACCAGAGGCTAAGGATCTTATCTGTAGGTTGCTATGTGATGTTGACAATAGGCTTGGTAGCGGAGGAGTGTACCAAATAAAAGCTCATCCTTGGTTCAATGACATTGTGTGGGATAAACTTTACGAAATGGAGGCAGCATTCAAGCCGGAAGTAAACAGAGAACTTGACACCCAAAATTTTATGAAGTTTGATGAGATGCTAATGACTCCCAAAGATCTTAGCTTTGTTGGCTATACATACAAGAACTTTGATGCTGTCAAAGGGCGTCACCTGTTCGATCCTGATAGAAGTATGTCATCAGGACAGCCACCAACTAATACTATCTACACAGATGACTCTAGAGCAGAATATAGTAGTGATATCATAGCCGATGAATCCGAGGTGCAGATGCTAGCATTGTCAGGTGATCCTATGTTGCCATAA 1626 43.3 MEASDERERRRKSDGERGSGENWWRKLKEPEADMEDPQGGKSKGEEEVLGSSLTMEKVAAAKKFIENHYRAQIKNIQERKERRWVLERRLASSDVPKEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMVKRGQVEHVRAERNLLAEVACHCIVKLYYSFQDTEYLYLIMEYLPGGDVMTLLMREDTLTESVAKFYMAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLSTLHENKTIDDENSAEPMEIDSVPDASNQPIWKSPLEQLQHWQRNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLTFPEDAKLSPEAKDLICRLLCDVDNRLGSGGVYQIKAHPWFNDIVWDKLYEMEAAFKPEVNRELDTQNFMKFDEMLMTPKDLSFVGYTYKNFDAVKGRHLFDPDRSMSSGQPPTNTIYTDDSRAEYSSDIIADESEVQMLALSGDPMLP 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9450042 9455030 - Conep07aG0131200.1 Cone7ag1274 441870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1274 541 SUPERFAMILY Protein kinase-like (PK-like) 111 472 IPR011009 -
Cone7ag1274 541 SMART pkinase_C_6 434 483 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 MobiDBLite consensus disorder prediction 1 49 - -
Cone7ag1274 541 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 485 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cone7ag1274 541 ProSiteProfiles Protein kinase domain profile. 127 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 CDD STKc_NDR_like 125 482 - -
Cone7ag1274 541 Pfam Protein kinase domain 128 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 Pfam Protein kinase domain 330 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 ProSiteProfiles AGC-kinase C-terminal domain profile. 434 491 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 FunFam Non-specific serine/threonine protein kinase 332 451 - -
Cone7ag1274 541 Gene3D Transferase(Phosphotransferase) domain 1 213 450 - -
Cone7ag1274 541 SMART serkin_6 127 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 MobiDBLite consensus disorder prediction 1 43 - -
Cone7ag1274 541 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524(InterPro)
Cone7ag1274 541 FunFam Non-specific serine/threonine protein kinase 88 210 - -
Cone7ag1274 541 FunFam Non-specific serine/threonine protein kinase 211 278 - -
Cone7ag1274 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1274 541 CDD MobB_NDR_LATS-like 61 122 - -
Cone7ag1274 541 Gene3D Phosphorylase Kinase; domain 1 118 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1534 Cone-Chr5:10521986 Cone7ag1274 Cone-Chr7:9450042 1.24E-211 dispersed
Cone7ag0749 Cone-Chr7:4583179 Cone7ag1274 Cone-Chr7:9450042 6.03E-262 dispersed
Cone7ag1274 Cone-Chr7:9450042 Cone7ag1375 Cone-Chr7:9934071 2.07E-203 dispersed
Cone4ag1678 Cone-Chr4:12544530 Cone7ag1274 Cone-Chr7:9450042 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83055 PF02622 DUF179 2.30E-33 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1274 K08790 - cit:102627835 870.537