Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1290 ATGATGTGGCGGGATCTCTGGCCGATTCTATTATTCGATGGTTCCACAGAAAAAACTCGTCTTTTCTCAGGGTCCCTTTTACAGACGATCTCAAAATCGATGGCCACCACATGTGGAGATTCCGACTCGGAACTCTGCCGAGATTACTCAGAAGCATTCGTTCTCAAACTGATCGCAATCGCATCGATCCTCACCGCCGGAGCCGTCGGAATTCTCATCCCACTGGTCGGTAAAAACCGACGGTTTCTCAAAACGGATGGCAACCTCTTCGTGGGCGCCAAGGCCTTCGCCGCCGGCGTGATCCTCGCCACCGGATTCGTTCACATGCTACCGGACGGATCGGAAGCTCTATCCAGTTCGTGCTTACCGGAATATCCGTGGTCCAAGTTCCCCTTCGCTGGGTTCTTCGCCATGATGGCTTCGCTCTTGACTCTCCTCGTTGACTTTGTGGGGACCCAGTATTACGAGCGGAAACAGGGCCTGATCCGTTCGGGCAAGGATTGTAAGCGGGTCGGAACGGTTGATGGGGAGCTAGAATCGGGTATTGTGGACGCCGTCCTTGAGAATAAGGAGCGGAGTAGGACGGTCTTTGGGGAAGAAGAAGACGGGGGAATGCACATCGTGGGAATGCATGCACACGTGGCGCACCATAGGCACAGCCATCTACATGGGAAGGAGGCATGTGAGGGGCACGTGAGTGAACAATCTAGTAATCATGGGCATGGACATGGGCATTCGCATGGCCTTGGAGACGCTGACGAGGATGATGGTGCTCGGCACGTTGTCGTTTCTCAGATATTAGAGCTTGGGATCATATCACATTCAGTGATAATCGGGCTATCGCTAGGAGTTTCACAGAGCCCATGTACAGTTAGACCCTTAATAGCAGCTTTATCTTTCCATCAGTTCTTTGAAGGATTTGCACTGGGCGGATGCATCTCTCAGGCCCAATTCAGCAGCCTATCAACCACTCTAATGTCGTGTTTCTTTGCCGTAACAACACCGGCTGGGATTGGAATCGGGATGGGGGTCTCTGCAATTTACGACCCCAACAGCGTGGGGGCATTGGTGGCTGAGGGGACCTTGGATTCTCTGTCGGCTGGAATTCTGGTCTATATGGCTTTAGTGGATCTGGTTGCAGCTGACTTTTTGAGTAAGAGAATGAGATGTAATTTTAGGCTTCAAGTAGTTTCTTATCTTTTGCTCTTCCTTGGTGCTGCTCTCATGTCTTCTCTTGCTATTTGGGCTTGA 1251 51.48 MMWRDLWPILLFDGSTEKTRLFSGSLLQTISKSMATTCGDSDSELCRDYSEAFVLKLIAIASILTAGAVGILIPLVGKNRRFLKTDGNLFVGAKAFAAGVILATGFVHMLPDGSEALSSSCLPEYPWSKFPFAGFFAMMASLLTLLVDFVGTQYYERKQGLIRSGKDCKRVGTVDGELESGIVDAVLENKERSRTVFGEEEDGGMHIVGMHAHVAHHRHSHLHGKEACEGHVSEQSSNHGHGHGHSHGLGDADEDDGARHVVVSQILELGIISHSVIIGLSLGVSQSPCTVRPLIAALSFHQFFEGFALGGCISQAQFSSLSTTLMSCFFAVTTPAGIGIGMGVSAIYDPNSVGALVAEGTLDSLSAGILVYMALVDLVAADFLSKRMRCNFRLQVVSYLLLFLGAALMSSLAIWA 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9516202 9518092 + Conep07aG0132900.1 Cone7ag1290 441886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1290 416 NCBIfam ZIP zinc/iron transport family 38 416 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cone7ag1290 416 MobiDBLite consensus disorder prediction 230 254 - -
Cone7ag1290 416 PANTHER ZINC/IRON TRANSPORTER 52 415 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cone7ag1290 416 Pfam ZIP Zinc transporter 55 413 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1290 Cone-Chr7:9516202 Cone8ag1604 Cone-Chr8:11878688 5.63E-88 dispersed
Cone17ag0926 Cone-Chr17:7271060 Cone7ag1290 Cone-Chr7:9516202 1.08E-173 wgd
Cone20ag0270 Cone-Chr20:1203835 Cone7ag1290 Cone-Chr7:9516202 7.10E-197 wgd
Cone4ag1663 Cone-Chr4:12488667 Cone7ag1290 Cone-Chr7:9516202 6.93E-236 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1290 K14709 - mdm:103440761 577.015