Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1305 ATGATGATCGGAGAAAAAGCCCGGTTAATCCCGAGCATTGAAGTCCCTCCATGGGACCCACTCGACGATTCCAGAACACGATCACCATTCTCTATCACGAGTCCCTCCGTCATCCGCAACGGAAATGCCGGAAACGGCGATCCTGTCCTAGACTATATCAGGACGATGCACCGTTACCTTACGTCCAATGAGTTCGCCGGCGTAGAGTCTGACCCGCCGGATACTGAGGAATTCGACATGGCTGTGGACGCTTTCTCATGCGATCATTTCCGCATGTTCGAGTTCAAGGTCAGAAAGTGCGCACGTGCGAGGTCACATGACTGGACGGACTGTCCGTACGCTCATCCGGCTGAGAAGGCTCGCCGGAGAGATCCGAGGAAGTACCACTACTCCGGTACGGCGTGTCCGGAGTTTCGGAAAGGGATTTGCAAGAAGGGGGACGCGTGTGAGTTCGCTCATGGAATATTCGAGTGCTGGCTCCATCCTACTCGTTATCGGACACAACCTTGCAAAGACGGACTCGGCTGTCGCAGGCGTGTGTGCTTTTTCGCCCACTCTCCGGAACAACTCCGGGTCCTGTCTCAGCAGAGTCCGGGAAGCCTTGGGTCGGGCGATTCCTTTGATGGATCTCCGCCTCGTCAGACTCACCGTCATGCATTCGAGTCCTACCTAGAAAAGATGGCCATGGTCTCATCGCCGCCACTTTCACCGTCGTCCCCGTCCGTACCGCCAAACAGTGCTGAACACGGTTGCCATTGTGGTTCCGTTTACAACTTTACCCCTTCCTGTCGGCTCGTCGCGTTAATGCGCGATCTGCATCTCGACAAGACGAAAATGAATCCTCAATGGAACGTTCAGATGGATCCTGGTTGTGGGTCGACGATCCGTACCGGATTTAACAGCATGCCTTCGACTCCGACCCGAACTTCCACTCTATCTGGGCTAGGTGCAGTTGATCACTGGAGCATAGGTGCTGAAGAAGAGCACGCAATGGAAAGGGTTGAATCTGGGAAATATTTGCGCGACAAGATATATGCCGAACTCAGTCGGGATAACTCAGTGGGTCAAGGCCGCAACTCGGCCGTTTCAGCTCCTGATGTTGGCTGGGTGTCTGAGCTAGTAAAGTGA 1128 54.34 MMIGEKARLIPSIEVPPWDPLDDSRTRSPFSITSPSVIRNGNAGNGDPVLDYIRTMHRYLTSNEFAGVESDPPDTEEFDMAVDAFSCDHFRMFEFKVRKCARARSHDWTDCPYAHPAEKARRRDPRKYHYSGTACPEFRKGICKKGDACEFAHGIFECWLHPTRYRTQPCKDGLGCRRRVCFFAHSPEQLRVLSQQSPGSLGSGDSFDGSPPRQTHRHAFESYLEKMAMVSSPPLSPSSPSVPPNSAEHGCHCGSVYNFTPSCRLVALMRDLHLDKTKMNPQWNVQMDPGCGSTIRTGFNSMPSTPTRTSTLSGLGAVDHWSIGAEEEHAMERVESGKYLRDKIYAELSRDNSVGQGRNSAVSAPDVGWVSELVK 375
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 9597418 9598545 - Conep07aG0134400.1 Cone7ag1305 441901
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1305 375 Gene3D - 125 199 - -
Cone7ag1305 375 ProSiteProfiles Zinc finger C3H1-type profile. 130 156 IPR000571 GO:0046872(InterPro)
Cone7ag1305 375 FunFam Zinc finger CCCH domain-containing protein 66 87 155 - -
Cone7ag1305 375 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 133 154 IPR000571 GO:0046872(InterPro)
Cone7ag1305 375 MobiDBLite consensus disorder prediction 195 210 - -
Cone7ag1305 375 SMART c3hfinal6 129 155 IPR000571 GO:0046872(InterPro)
Cone7ag1305 375 SMART c3hfinal6 164 187 IPR000571 GO:0046872(InterPro)
Cone7ag1305 375 PANTHER UNKEMPT FAMILY MEMBER 47 375 IPR045234 -
Cone7ag1305 375 MobiDBLite consensus disorder prediction 195 215 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0724 Cone-Chr7:4337825 Cone7ag1305 Cone-Chr7:9597418 6.26E-93 dispersed
Cone7ag1137 Cone-Chr7:8577193 Cone7ag1305 Cone-Chr7:9597418 3.20E-103 dispersed
Cone17ag0910 Cone-Chr17:7172447 Cone7ag1305 Cone-Chr7:9597418 2.33E-115 wgd
Cone4ag1644 Cone-Chr4:12410916 Cone7ag1305 Cone-Chr7:9597418 2.85E-262 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46543 PF00332 Glyco_hydro_17 1.40E-99 CL0058 Cone TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1305 - - - 0.0