Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1317 ATGGCTCCATTGTTCAATTGGTGGGCAAAAGAGAGCCACAGAGGAACCCCTGTGATTGTTAAAATGGAGAACCCAAACTGGTCCATGGTCGAGCTCGAAGGCCCCTCTGAAGACGACTTCCTTCTCTCCGATTCTTCTCCGACACTAACCAGAGAGAAAGGCCGAGGCAAAAACGCTAAACAGCTCACTTGGGTCCTCCTCCTTAAAGCCCATAAAGCCGCCGGCTGTTTAACCTTCATCGGCTCCGCATTGGTCGGACTCGCCTCCACCGTCAAACGCCGTGTCGCCTCCGGCCGCACCGACACCGACAATGATAACGATGCTAGCATAGTTGGTCTAGACAAGGAGAATCGGACCGTCAGGACTAGGTTTTACTCATTTATTAAGGTTTTCCTCTTCTTGTCGGTGCTTCTGTTAGTGTTCGAGAGCGCGGCTTATTTCAAAGGCTGGCATTTTGGGGCGCCTCAGCTGCAATGGGACTACTTATGGGCGACGCCTTTTGGTGTTAAGGATTTGTTCGATTTGATTTATTCTCAGTGGGTTTTGTTTAGGGTGGATTATCTCGCTCCCCCTCTGCAATTTCTAGCCAATGCTTGTATCGTACTCTTCCTAATTCAGAGCTGCGATAGGCTTGTTCTCTGTATGGGTTGTTTCTGGATCCGGTATAAGAAGATCAAACCGGTCCCTAAAGAAGCTGGCTTAGATCTTGAATCTGGAGACAGTGGCTACTTCCCTATGGTTCTTGTTCAGATCCCCATGTGTAATGAAAAGGAGGTTTACCATCAATCAATTGCCGCTGTCTGCAATTTAGACTGGCCGAAATCAAAGATGTTGATTCAGGTTCTAGACGATTCGGATGACCCGACGACCCAAGTGTTGATCAAACATGAGGTTGAAAAATGGCAGCAAGATGGAGCCCATATTGTGTACCGTCATAGAGTGATTAGAGACGGGTATAAAGCTGGTAATCTCAAATCCGCCATGAATTGTAGTTACGTGAAAGACTACGAATTCATCACAATCTTTGATGCCGATTTCCAGCCCCATCCGGATTTCCTTAAAAAAACAGTTCCTCACTTCAAGGGTAATGAGGAACTGGGGCTGGTCCAAGCAAGATGGTCCTTTGTGAACAGGGACGAAAATTTGCTAACAAGACTGCAAAATATTAATCTAGCATTCCATTTCGAGGTAGAGCAGCAAGTAAATGGTGCTTTCCTTAATTTTTTTGGGTTTAATGGGACAGCTGGTGTTTGGCGGATTAAAGCTCTAGAAGAATCTGGTGGGTGGTTGGAGAGAACAACTGTAGAAGACATGGACATTGCTGTTAGAGCTCATCTTCATGGTTGGAAATTCATCTTTCTTAATGATGTTGAGTGTCAATGTGAATTACCGGAATCTTATGAAGCTTATAGAAAACAGCAACACAGATGGCACTCCGGCCCGATGCAATTATTTCGTCTTTGTGTACTGGATATAATAAAATCCAAGATTAGCATATGGAAGAAATTCAACATGATATTCCTCTTCTTTCTCCTTAGAAAATTGATCCTCCCCTTCTATTCTTTCACACTCTTCTGCATAATTCTCCCCATGACAATGTTCATTCCGGAAGCCCAGCTTCCAGCATGGGTTGTCTGCTACATTCCGGCCATCATGTCCTTCCTCAACATCCTCCCTGCCCCTAAATCTTTCCCTTTCATAGTCCCTTACCTTCTGTTTGAAAACACCATGTCCATTACTAAGTTCAATGCGATGATTTCTGGGCTATTTCAGTTGGGGAGTGCTTATGAATGGGTGGTTACAAAAAAGTCCGGACGATCCTCAGAGGGTGATCTTGTAAATTTGATTGAAAAGGGGCCTAAGCCTCAAAGAAGGACGTCAGAGCCTGATCTTGAGGAAATGAAGGACGAGATTCAAAAAGAGGAACAAAATGCTTCTAGGAAGACAAAACATAACAGGATTTATACAAAGGAACTGGCTTTAGCTTTTCTTCTTCTAACGGCTTCAGCAAGGAGTTTGTTGTCTGCTCAGGGGATCCATTTCTACTTCTTGCTTTTTCAGGGCATATCGTTTTTACTTGTTGGCTTGGATCTGGTTGGTGAACAAGTTATTTAG 2115 44.44 MAPLFNWWAKESHRGTPVIVKMENPNWSMVELEGPSEDDFLLSDSSPTLTREKGRGKNAKQLTWVLLLKAHKAAGCLTFIGSALVGLASTVKRRVASGRTDTDNDNDASIVGLDKENRTVRTRFYSFIKVFLFLSVLLLVFESAAYFKGWHFGAPQLQWDYLWATPFGVKDLFDLIYSQWVLFRVDYLAPPLQFLANACIVLFLIQSCDRLVLCMGCFWIRYKKIKPVPKEAGLDLESGDSGYFPMVLVQIPMCNEKEVYHQSIAAVCNLDWPKSKMLIQVLDDSDDPTTQVLIKHEVEKWQQDGAHIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFITIFDADFQPHPDFLKKTVPHFKGNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNGAFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCVLDIIKSKISIWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAQLPAWVVCYIPAIMSFLNILPAPKSFPFIVPYLLFENTMSITKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVNLIEKGPKPQRRTSEPDLEEMKDEIQKEEQNASRKTKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLVGEQVI 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9641464 9644753 + Conep07aG0135600.1 Cone7ag1317 441913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1317 704 Coils Coil 631 651 - -
Cone7ag1317 704 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Cone7ag1317 704 MobiDBLite consensus disorder prediction 618 649 - -
Cone7ag1317 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 462 IPR029044 -
Cone7ag1317 704 MobiDBLite consensus disorder prediction 621 649 - -
Cone7ag1317 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 524 IPR029044 -
Cone7ag1317 704 Pfam Glycosyl transferase family group 2 338 534 IPR001173 -
Cone7ag1317 704 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 174 703 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0519 Cone-Chr1:5081321 Cone7ag1317 Cone-Chr7:9641464 3.22E-134 dispersed
Cone4ag1865 Cone-Chr4:13366518 Cone7ag1317 Cone-Chr7:9641464 6.36e-310 dispersed
Cone5ag1365 Cone-Chr5:8306497 Cone7ag1317 Cone-Chr7:9641464 9.03E-134 dispersed
Cone7ag1317 Cone-Chr7:9641464 Cone7ag1772 Cone-Chr7:11666227 4.50e-310 dispersed
Cone17ag0903 Cone-Chr17:7115534 Cone7ag1317 Cone-Chr7:9641464 0 wgd
Cone20ag0246 Cone-Chr20:1089883 Cone7ag1317 Cone-Chr7:9641464 0 wgd
Cone4ag1635 Cone-Chr4:12361036 Cone7ag1317 Cone-Chr7:9641464 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1317 - - - 0.0