Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag1339 | ATGGAAAGCTATTTGAAACAAAATTTCGGGGAGGTGAAAGCGAAGAACTCATCGGAGGAAGCGCTTCAGAGATGGAGGAAGCTCTGTTGGGTGGTGAAGAATCGGAAACGGAGGTTTCGTTTCACAGCTAATCTCTCTAAGCGTTTTGAGGCCGACGCTATACGGCGATCCAATAAGTTAAAAGTTGCAGTCCTGGTTTCCCAAGCTGCTCTTCAATTTATTAACGGCCGAAGTTTGTCCAGTGACTACATCGTGCCTAAAGAGGTAGAAGATGCAGGTTTTCAAATTTGTGCTGATGAAGTCGGTTCCATCGTTGATATCCGTGATATGAAAAAGCTCAGCATTCATGGTTGGGTAGGTGGCATTGCAGACAAGCTTTCTACATCAATTACCACTGGAATTCCCACTTCTGAGAATTTGATCAAAACCAGAAAAGAGATTTATGGAATTAACAAGTTCACTGAAACCCCACCCCGTGGTTTTTGGCTTTTCGTTTGGGAAGCCCTGCAAGATATGACTCTAATGATACTTGCTGCTTGTGCCATTGTGTCTCTTCTAGTTGGCATAACTATTGAAGGATGGCCCAAAGGAGCCCATGATGGACTCGGAATTGTTGCGAGCATTTTGCTTGTGGTATTTGTCACTGCCACAAGTGACTACAGACAGTCTCTTCAGTTCAAGGATTTGGACAGAGAGAAGAAAAAGATTGCAATCCAGGTTACCAGAAATGGGTTCAGACAAAAGCTTTCGATATATGATCTACTTCCTGGTGACATTGTTCATCTTTCCATAGGGGATCAAGTACCAGCTGATGGTCTTTTTATTTCGGGCTTTTCTGTTTTGATAAATGAATCAAGTTTAACCGGTGAAAGTGAACCGGTTAATGTGAATGATGGAAATCCTTTTCTTCTCTCTGGAACAAAAGTTCAGGATGGATCGTGCAAGATGCTTGTGACTTCCGTTGGAATGAGAACCCAATGGGGCAAACTGATGGCTACTCTCAGTGAAGGAGGAGATGATGAGACTCCCTTGCAGGTCAAGCTAAATGGTGTGGCGACCATTATCGGTAAAATAGGACTGTTTTTTGCTGTCGTCACATTTGCTGTTTTGGTGCAAGGATTGTTTAGCCACAAGCTCCAAGAAGGGTCCCACTGGATTTGGTCTGGAGATGATGCAATGGCCATTCTAGAGTTCTTTGCTATTGCTGTTACCATTGTTGTTGTTGCTGTTCCTGAAGGACTGCCATTGGCAGTGACCCTTAGCCTTGCTTTTGCCATGAAAAAGATGATGAACGATAAGGCGCTTGTCAGGCATCTGGCTGCTTGTGAGACAATGGGATCTGCTACTACTATCTGTAGTGACAAGACTGGGACATTAACTACTAACTGTATGACAGTTGTGAAAGCTTGTATATGCGAGAAAGTAAAAGATGTTGGAAGCTCTGCTGAGGGTACTAATTACCGCTCTGAAATTCCTAACTCTTCTCTAAGGATTCTACTTCAGTCAATATTTAATAATACTGGAGGAGATATTGTCAAAAATGAAGATGGTAAGACTGTGATTCTTGGAACATCTACTGAATCTGCTCTTTTGCAATTTGGGCTATCACTTGGTGGAGATTTCCGAGAAGTACGCGAAGCATGTAAAATTGTAAAAGTTGAGCCCTTCAATTCTTTGAAGAAACAAATGGGAGTTGTTCTAGAGCTTCCAGAACATGGCTTCCGAGCCCACTCTAAAGGTGCTTCTGAAATAGTGTTAGCTTCATGCGATAAAGTGTTAGACTCCAATGGTGATGTCGTTCCCCTCAATGAAGAATCCATCAATCGATTGAATAATACAATTGAACAATTTGCCAATGAAGCTCTTAGAACCCTGTGCCTCGCTTACATGGACATTGAAGGTGTGTACAATGCAGAGAGTTCTATGCCTGTAAATGGGTACACATGCATAGGAATAGTTGGTATCAAAGATCCAGTCCGTCCAGGTGTCAAGGAATCTGTTGCAATTTGTAGAGCAGCTGGTATCACGGTAAGGATGGTTACTGGAGACAACATAAATACTGCAAAGGCAATTGCTAGAGAATGTGGCATTTTGACAGATGGTGTAGCAATTGAAGGCCCGGTATTTCGTGAGATGAATGAGGAGGATATGCTCAAGATAATTCCAAAAATTCAGGTAATGGCACGATCTTCTCCAATGGATAAGCATACACTTGTGAAACAATTACGCACTAATCTGCAAGAAGTTGTGGCAGTGACTGGCGATGGCACAAATGATGCTCCAGCACTTCACGAAGCAGATATAGGACTAGCAATGGGCATTGCTGGGACTGAGGTGGCAAAGGAGAGTGCTGATGTGATCATTCTAGACGACAATTTCTCCACAATCGCAACTGTGGCCAAATGGGGACGCTCAGTTTATATAAACATTCAGAAATTTGTCCAGTTTCAGCTGACAGTAAATGTAGTTGCATTACTTGTCAACTTTTCTTCAGCCTGTTTAACTGGACATGCTCCCCTCACTGCTGTTCAGCTTCTCTGGGTCAACATGATAATGGACACACTAGGAGCACTTGCATTAGCCACGGAGCCTCCTACTGACGACTTGATGAAGAGATCTCCAGTTGGTAGGAGAGGAAATTTCATCAATAATGTGATGTGGAGAAATATCTTAGGACAATCTTTATATCAATTTGTGATTATCTGGTATCTCCAGACTAGAGGAAAAACCCTTTTCCATCTTGATGGTCCAGAGTCTGATTTGATGCTGAACACAATAATATTCAACTCCTTCGTTTTCTGTCAGGTATTCAACGAGATCAGCTCTAGAGAGATGGAGAAGATAAATGTGTTCAAGGGAATTCTAGATAACTATGTCTTTGCGTCTGTGCTCAGTCTCACAGTCCTGTTCCAAATCATCATAGTGCAGTTTCTGGGTGAATTTGCAAACACGCATCCTCTCAGTTTGCCTCAATGGATTTTCACTCTTCTCCTTGGCTTCCTCGGCATGCCCATTGGCGCAGCGTTGAAGATGATCCCGGTCGGATTAGACTGA | 3054 | 42.83 | MESYLKQNFGEVKAKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEADAIRRSNKLKVAVLVSQAALQFINGRSLSSDYIVPKEVEDAGFQICADEVGSIVDIRDMKKLSIHGWVGGIADKLSTSITTGIPTSENLIKTRKEIYGINKFTETPPRGFWLFVWEALQDMTLMILAACAIVSLLVGITIEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDREKKKIAIQVTRNGFRQKLSIYDLLPGDIVHLSIGDQVPADGLFISGFSVLINESSLTGESEPVNVNDGNPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFSHKLQEGSHWIWSGDDAMAILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNCMTVVKACICEKVKDVGSSAEGTNYRSEIPNSSLRILLQSIFNNTGGDIVKNEDGKTVILGTSTESALLQFGLSLGGDFREVREACKIVKVEPFNSLKKQMGVVLELPEHGFRAHSKGASEIVLASCDKVLDSNGDVVPLNEESINRLNNTIEQFANEALRTLCLAYMDIEGVYNAESSMPVNGYTCIGIVGIKDPVRPGVKESVAICRAAGITVRMVTGDNINTAKAIARECGILTDGVAIEGPVFREMNEEDMLKIIPKIQVMARSSPMDKHTLVKQLRTNLQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACLTGHAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRSPVGRRGNFINNVMWRNILGQSLYQFVIIWYLQTRGKTLFHLDGPESDLMLNTIIFNSFVFCQVFNEISSREMEKINVFKGILDNYVFASVLSLTVLFQIIIVQFLGEFANTHPLSLPQWIFTLLLGFLGMPIGAALKMIPVGLD | 1017 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 9747578 | 9751928 | + | Conep07aG0138000.1 | Cone7ag1339 | 441935 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag1339 | 1017 | SMART | Cation_ATPase_N_a_2 | 114 | 189 | IPR004014 | - | |
| Cone7ag1339 | 1017 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 50 | IPR024750 | GO:0005516(InterPro) | |
| Cone7ag1339 | 1017 | FunFam | Calcium-transporting ATPase | 647 | 798 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | H+-transporting ATPase (proton pump) signature | 753 | 769 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag1339 | 1017 | PRINTS | H+-transporting ATPase (proton pump) signature | 610 | 628 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag1339 | 1017 | PRINTS | H+-transporting ATPase (proton pump) signature | 785 | 810 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag1339 | 1017 | Gene3D | - | 17 | 75 | - | - | |
| Cone7ag1339 | 1017 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 106 | 1014 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone7ag1339 | 1017 | Pfam | E1-E2 ATPase | 237 | 431 | - | - | |
| Cone7ag1339 | 1017 | CDD | P-type_ATPase_Ca_PMCA-like | 144 | 886 | - | - | |
| Cone7ag1339 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 544 | 699 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag1339 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 719 | 835 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag1339 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 390 | 476 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone7ag1339 | 1017 | FunFam | Calcium-transporting ATPase | 462 | 658 | - | - | |
| Cone7ag1339 | 1017 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 454 | 460 | IPR018303 | - | |
| Cone7ag1339 | 1017 | SFLD | Haloacid Dehalogenase | 434 | 805 | - | - | |
| Cone7ag1339 | 1017 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 458 | 663 | IPR023299 | GO:0000166(InterPro) | |
| Cone7ag1339 | 1017 | Pfam | haloacid dehalogenase-like hydrolase | 644 | 767 | - | - | |
| Cone7ag1339 | 1017 | Gene3D | - | 449 | 798 | IPR023214 | - | |
| Cone7ag1339 | 1017 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 119 | 1013 | IPR023298 | - | |
| Cone7ag1339 | 1017 | SUPERFAMILY | HAD-like | 450 | 858 | IPR036412 | - | |
| Cone7ag1339 | 1017 | Pfam | Cation transport ATPase (P-type) | 513 | 592 | - | - | |
| Cone7ag1339 | 1017 | Gene3D | - | 138 | 335 | - | - | |
| Cone7ag1339 | 1017 | SUPERFAMILY | Calcium ATPase, transduction domain A | 238 | 332 | IPR008250 | - | |
| Cone7ag1339 | 1017 | Gene3D | - | 462 | 658 | IPR023299 | GO:0000166(InterPro) | |
| Cone7ag1339 | 1017 | SFLD | p-type atpase | 434 | 805 | IPR044492 | - | |
| Cone7ag1339 | 1017 | Gene3D | - | 167 | 1011 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 283 | 297 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 753 | 772 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 673 | 683 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 452 | 466 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 777 | 789 | - | - | |
| Cone7ag1339 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 651 | 662 | - | - | |
| Cone7ag1339 | 1017 | Pfam | Cation transporting ATPase, C-terminus | 838 | 1012 | IPR006068 | - | |
| Cone7ag1339 | 1017 | FunFam | Calcium-transporting ATPase | 17 | 75 | - | - | |
| Cone7ag1339 | 1017 | Pfam | Cation transporter/ATPase, N-terminus | 120 | 184 | IPR004014 | - | |
| Cone7ag1339 | 1017 | FunFam | Calcium-transporting ATPase | 770 | 1016 | - | - | |
| Cone7ag1339 | 1017 | FunFam | Calcium-transporting ATPase | 215 | 335 | - | - | |
| Cone7ag1339 | 1017 | PANTHER | CATION TRANSPORTING ATPASE | 85 | 1014 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag1463 | Cone-Chr6:11673578 | Cone7ag1339 | Cone-Chr7:9747578 | 0 | dispersed | |
| Cone7ag1325 | Cone-Chr7:9695965 | Cone7ag1339 | Cone-Chr7:9747578 | 2.17E-82 | dispersed | |
| Cone7ag1339 | Cone-Chr7:9747578 | Cone7ag1759 | Cone-Chr7:11619413 | 1.03E-43 | dispersed | |
| Cone4ag1612 | Cone-Chr4:12258704 | Cone7ag1339 | Cone-Chr7:9747578 | 0 | wgd | |
| Cone7ag1339 | Cone-Chr7:9747578 | Cone9ag1384 | Cone-Chr9:10346429 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag1339 | K01537 | - | csv:101221694 | 1671.75 |