Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1339 ATGGAAAGCTATTTGAAACAAAATTTCGGGGAGGTGAAAGCGAAGAACTCATCGGAGGAAGCGCTTCAGAGATGGAGGAAGCTCTGTTGGGTGGTGAAGAATCGGAAACGGAGGTTTCGTTTCACAGCTAATCTCTCTAAGCGTTTTGAGGCCGACGCTATACGGCGATCCAATAAGTTAAAAGTTGCAGTCCTGGTTTCCCAAGCTGCTCTTCAATTTATTAACGGCCGAAGTTTGTCCAGTGACTACATCGTGCCTAAAGAGGTAGAAGATGCAGGTTTTCAAATTTGTGCTGATGAAGTCGGTTCCATCGTTGATATCCGTGATATGAAAAAGCTCAGCATTCATGGTTGGGTAGGTGGCATTGCAGACAAGCTTTCTACATCAATTACCACTGGAATTCCCACTTCTGAGAATTTGATCAAAACCAGAAAAGAGATTTATGGAATTAACAAGTTCACTGAAACCCCACCCCGTGGTTTTTGGCTTTTCGTTTGGGAAGCCCTGCAAGATATGACTCTAATGATACTTGCTGCTTGTGCCATTGTGTCTCTTCTAGTTGGCATAACTATTGAAGGATGGCCCAAAGGAGCCCATGATGGACTCGGAATTGTTGCGAGCATTTTGCTTGTGGTATTTGTCACTGCCACAAGTGACTACAGACAGTCTCTTCAGTTCAAGGATTTGGACAGAGAGAAGAAAAAGATTGCAATCCAGGTTACCAGAAATGGGTTCAGACAAAAGCTTTCGATATATGATCTACTTCCTGGTGACATTGTTCATCTTTCCATAGGGGATCAAGTACCAGCTGATGGTCTTTTTATTTCGGGCTTTTCTGTTTTGATAAATGAATCAAGTTTAACCGGTGAAAGTGAACCGGTTAATGTGAATGATGGAAATCCTTTTCTTCTCTCTGGAACAAAAGTTCAGGATGGATCGTGCAAGATGCTTGTGACTTCCGTTGGAATGAGAACCCAATGGGGCAAACTGATGGCTACTCTCAGTGAAGGAGGAGATGATGAGACTCCCTTGCAGGTCAAGCTAAATGGTGTGGCGACCATTATCGGTAAAATAGGACTGTTTTTTGCTGTCGTCACATTTGCTGTTTTGGTGCAAGGATTGTTTAGCCACAAGCTCCAAGAAGGGTCCCACTGGATTTGGTCTGGAGATGATGCAATGGCCATTCTAGAGTTCTTTGCTATTGCTGTTACCATTGTTGTTGTTGCTGTTCCTGAAGGACTGCCATTGGCAGTGACCCTTAGCCTTGCTTTTGCCATGAAAAAGATGATGAACGATAAGGCGCTTGTCAGGCATCTGGCTGCTTGTGAGACAATGGGATCTGCTACTACTATCTGTAGTGACAAGACTGGGACATTAACTACTAACTGTATGACAGTTGTGAAAGCTTGTATATGCGAGAAAGTAAAAGATGTTGGAAGCTCTGCTGAGGGTACTAATTACCGCTCTGAAATTCCTAACTCTTCTCTAAGGATTCTACTTCAGTCAATATTTAATAATACTGGAGGAGATATTGTCAAAAATGAAGATGGTAAGACTGTGATTCTTGGAACATCTACTGAATCTGCTCTTTTGCAATTTGGGCTATCACTTGGTGGAGATTTCCGAGAAGTACGCGAAGCATGTAAAATTGTAAAAGTTGAGCCCTTCAATTCTTTGAAGAAACAAATGGGAGTTGTTCTAGAGCTTCCAGAACATGGCTTCCGAGCCCACTCTAAAGGTGCTTCTGAAATAGTGTTAGCTTCATGCGATAAAGTGTTAGACTCCAATGGTGATGTCGTTCCCCTCAATGAAGAATCCATCAATCGATTGAATAATACAATTGAACAATTTGCCAATGAAGCTCTTAGAACCCTGTGCCTCGCTTACATGGACATTGAAGGTGTGTACAATGCAGAGAGTTCTATGCCTGTAAATGGGTACACATGCATAGGAATAGTTGGTATCAAAGATCCAGTCCGTCCAGGTGTCAAGGAATCTGTTGCAATTTGTAGAGCAGCTGGTATCACGGTAAGGATGGTTACTGGAGACAACATAAATACTGCAAAGGCAATTGCTAGAGAATGTGGCATTTTGACAGATGGTGTAGCAATTGAAGGCCCGGTATTTCGTGAGATGAATGAGGAGGATATGCTCAAGATAATTCCAAAAATTCAGGTAATGGCACGATCTTCTCCAATGGATAAGCATACACTTGTGAAACAATTACGCACTAATCTGCAAGAAGTTGTGGCAGTGACTGGCGATGGCACAAATGATGCTCCAGCACTTCACGAAGCAGATATAGGACTAGCAATGGGCATTGCTGGGACTGAGGTGGCAAAGGAGAGTGCTGATGTGATCATTCTAGACGACAATTTCTCCACAATCGCAACTGTGGCCAAATGGGGACGCTCAGTTTATATAAACATTCAGAAATTTGTCCAGTTTCAGCTGACAGTAAATGTAGTTGCATTACTTGTCAACTTTTCTTCAGCCTGTTTAACTGGACATGCTCCCCTCACTGCTGTTCAGCTTCTCTGGGTCAACATGATAATGGACACACTAGGAGCACTTGCATTAGCCACGGAGCCTCCTACTGACGACTTGATGAAGAGATCTCCAGTTGGTAGGAGAGGAAATTTCATCAATAATGTGATGTGGAGAAATATCTTAGGACAATCTTTATATCAATTTGTGATTATCTGGTATCTCCAGACTAGAGGAAAAACCCTTTTCCATCTTGATGGTCCAGAGTCTGATTTGATGCTGAACACAATAATATTCAACTCCTTCGTTTTCTGTCAGGTATTCAACGAGATCAGCTCTAGAGAGATGGAGAAGATAAATGTGTTCAAGGGAATTCTAGATAACTATGTCTTTGCGTCTGTGCTCAGTCTCACAGTCCTGTTCCAAATCATCATAGTGCAGTTTCTGGGTGAATTTGCAAACACGCATCCTCTCAGTTTGCCTCAATGGATTTTCACTCTTCTCCTTGGCTTCCTCGGCATGCCCATTGGCGCAGCGTTGAAGATGATCCCGGTCGGATTAGACTGA 3054 42.83 MESYLKQNFGEVKAKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEADAIRRSNKLKVAVLVSQAALQFINGRSLSSDYIVPKEVEDAGFQICADEVGSIVDIRDMKKLSIHGWVGGIADKLSTSITTGIPTSENLIKTRKEIYGINKFTETPPRGFWLFVWEALQDMTLMILAACAIVSLLVGITIEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDREKKKIAIQVTRNGFRQKLSIYDLLPGDIVHLSIGDQVPADGLFISGFSVLINESSLTGESEPVNVNDGNPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFSHKLQEGSHWIWSGDDAMAILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNCMTVVKACICEKVKDVGSSAEGTNYRSEIPNSSLRILLQSIFNNTGGDIVKNEDGKTVILGTSTESALLQFGLSLGGDFREVREACKIVKVEPFNSLKKQMGVVLELPEHGFRAHSKGASEIVLASCDKVLDSNGDVVPLNEESINRLNNTIEQFANEALRTLCLAYMDIEGVYNAESSMPVNGYTCIGIVGIKDPVRPGVKESVAICRAAGITVRMVTGDNINTAKAIARECGILTDGVAIEGPVFREMNEEDMLKIIPKIQVMARSSPMDKHTLVKQLRTNLQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACLTGHAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRSPVGRRGNFINNVMWRNILGQSLYQFVIIWYLQTRGKTLFHLDGPESDLMLNTIIFNSFVFCQVFNEISSREMEKINVFKGILDNYVFASVLSLTVLFQIIIVQFLGEFANTHPLSLPQWIFTLLLGFLGMPIGAALKMIPVGLD 1017
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 9747578 9751928 + Conep07aG0138000.1 Cone7ag1339 441935
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1339 1017 SMART Cation_ATPase_N_a_2 114 189 IPR004014 -
Cone7ag1339 1017 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516(InterPro)
Cone7ag1339 1017 FunFam Calcium-transporting ATPase 647 798 - -
Cone7ag1339 1017 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1339 1017 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1339 1017 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1339 1017 Gene3D - 17 75 - -
Cone7ag1339 1017 NCBIfam calcium-translocating P-type ATPase, PMCA-type 106 1014 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cone7ag1339 1017 Pfam E1-E2 ATPase 237 431 - -
Cone7ag1339 1017 CDD P-type_ATPase_Ca_PMCA-like 144 886 - -
Cone7ag1339 1017 NCBIfam HAD-IC family P-type ATPase 544 699 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1339 1017 NCBIfam HAD-IC family P-type ATPase 719 835 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1339 1017 NCBIfam HAD-IC family P-type ATPase 390 476 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone7ag1339 1017 FunFam Calcium-transporting ATPase 462 658 - -
Cone7ag1339 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Cone7ag1339 1017 SFLD Haloacid Dehalogenase 434 805 - -
Cone7ag1339 1017 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 663 IPR023299 GO:0000166(InterPro)
Cone7ag1339 1017 Pfam haloacid dehalogenase-like hydrolase 644 767 - -
Cone7ag1339 1017 Gene3D - 449 798 IPR023214 -
Cone7ag1339 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 1013 IPR023298 -
Cone7ag1339 1017 SUPERFAMILY HAD-like 450 858 IPR036412 -
Cone7ag1339 1017 Pfam Cation transport ATPase (P-type) 513 592 - -
Cone7ag1339 1017 Gene3D - 138 335 - -
Cone7ag1339 1017 SUPERFAMILY Calcium ATPase, transduction domain A 238 332 IPR008250 -
Cone7ag1339 1017 Gene3D - 462 658 IPR023299 GO:0000166(InterPro)
Cone7ag1339 1017 SFLD p-type atpase 434 805 IPR044492 -
Cone7ag1339 1017 Gene3D - 167 1011 - -
Cone7ag1339 1017 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Cone7ag1339 1017 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Cone7ag1339 1017 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Cone7ag1339 1017 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Cone7ag1339 1017 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Cone7ag1339 1017 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Cone7ag1339 1017 Pfam Cation transporting ATPase, C-terminus 838 1012 IPR006068 -
Cone7ag1339 1017 FunFam Calcium-transporting ATPase 17 75 - -
Cone7ag1339 1017 Pfam Cation transporter/ATPase, N-terminus 120 184 IPR004014 -
Cone7ag1339 1017 FunFam Calcium-transporting ATPase 770 1016 - -
Cone7ag1339 1017 FunFam Calcium-transporting ATPase 215 335 - -
Cone7ag1339 1017 PANTHER CATION TRANSPORTING ATPASE 85 1014 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1463 Cone-Chr6:11673578 Cone7ag1339 Cone-Chr7:9747578 0 dispersed
Cone7ag1325 Cone-Chr7:9695965 Cone7ag1339 Cone-Chr7:9747578 2.17E-82 dispersed
Cone7ag1339 Cone-Chr7:9747578 Cone7ag1759 Cone-Chr7:11619413 1.03E-43 dispersed
Cone4ag1612 Cone-Chr4:12258704 Cone7ag1339 Cone-Chr7:9747578 0 wgd
Cone7ag1339 Cone-Chr7:9747578 Cone9ag1384 Cone-Chr9:10346429 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1339 K01537 - csv:101221694 1671.75