Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1355 ATGCCGATGAAGAAAAGTAGGCAATCACTTCAGTCCCTACTCTTCCTCTTCGTATCAACTGCTTTCATTTTTCTCTCCCTCTGCAACTCAGTATCTGTATCGAGCTCTGTTTTACCAAGTGACGGAGCAGCTCTTCTCGCATTCAAATCAGAAGCAGACGTAAACAACAACCTCCACTTCTCTATCACCACAACCGTTCCCCTTCATGGCTTCTGTCATTGGCAGGGTGTCACCTGCCACCAAAACAAAGCGGTGCGTTTCGTCCTTCAAGGCTTAGATCTCGGCGGCATTTTCGCTCCCAACACGTTGACTCGCCTTGACCAGCTCCGAATCCTGAGTTTACGTAACAATTCGCTCACGGGTTCCATTCCGGATCTCTCTCTCCTCGTCAACCTCAAGGCCCTCCTTCTCGACCACAACGATTTCACCGGTTCTTTCCCGCCTTCCATCCTCTTCCTCCATAAGCTCCGTATACTCGATTTTTGTCACAACAAGATTACCGGTCCGATTCCTTACTGGTTAGTAAACCTAGAGCAGCTGTCATATCTACGGCTTGACTCTAACCGGTTCAACGGAACCCTTCCGGCGCTGAACCAAACCGCTCTACAGACGTTTAACATTTCAATAAATAATCTCTCCGGTTCAATTCCTGTTACGCTGACTCTGCTACGGTTCGGTCCATCCTCATTCTTATGGAACCCCGGTCTATGCGGTGGGATTATACAAAGGGAATGCAAACTGACTCAACCGTTTTTCGGCGCAACGACGGTGGAGGTTGAAGCACGGCCGCCTGTTGCGGCCCTCGGTGAAAGCGCGGAGGTAAAAGGTGTTGATCAGTTTGTTGGATCATCGGGAAAGACTCACAAGAGAACCGCCGTGATTGTTGGATTCTCGTCTGGTGTTTTCCTCCTCGTCGGTTCAGTTCTCTGCTTCGTAATGGCCGTTCGGAAACAGAGTAACAACGACAAGATATCAACGGCTAAGATGGAATCAGATAAGACATCCAGTCCACAATCTACGGCAGAGGTCAAGGTAGAGCAAAAGATGAACGAGTTGGACGTTGTGAATGTTAATAAGAGCGGGAAGTTGGTGTTCTGTGCGGGTGAAGCACAGCTTTATACTCTGGACCAGCTGATGAGAGCATCGGCTGAGTTTCTTGGCAGAGGACGTGTAGGGACCACATACAAAGCCATGTTGGATAACCGTGAGATCGTAACCGTAAAACGACTTGACGCTTGTAAAATGGCGGGTACAAGTAAGGAATCCTTTGAGCGGCACATGGAATCACTAGCAGGGCTAGGGCATCCAAATCTAGTCCCCCTTAGAGCTTATTTTCACGCTAATGAAGAGAGGTTCGTCGTTTACGATTACCAGCCAAACGGCAGCATATTCTCCCTCGTTCACGGTACGAAGTCAACAAAATCAAAGCCGCTGCACTGGACATCGTGTTTGAAAATTGCAGAAGACGTAGCGCAAGGTCTTGCCTACATCCATCAAGCATGGAAGCTCGTCCATGGAAATCTCAAACCATCAAACGTGCTCCTCGGCGCTGACTTTGAGGCTCGCATCACCGACTACTGCTTCGCCGGTCATATCATTTCCGATTTTCCTTCGGACGATGAGTCGAATTCGAGTGCGTGTAGAGCTCCTGAGGCTCGGATCTGTAACAATCGACTGACCTCCAAATCCGATGTGTATACGTTTGGAATCCTGTTGTTTGAGCTTCTGACCGGAAAGCTTCCGTCTGAACATCCGTTCCTTGCGCCTTATGATATGGTGGATTGGGTTGTATCGTGTAGGAAGGATGATCGCGGAGGAGAAGAAAGGAGACTGGAAAATCTTGTTGAAGTGGCCATTGCTTGTAGAGTGACCTCGCCGGAGCAGAGGCCGACTATGAGACAGGTGTTGAAAATGTTGCAGGAGATTAAAGAGACGGTGCTGATGGAATATAATGAAATGGAGACCCAGATCAGGATTCCTTAA 1983 48.76 MPMKKSRQSLQSLLFLFVSTAFIFLSLCNSVSVSSSVLPSDGAALLAFKSEADVNNNLHFSITTTVPLHGFCHWQGVTCHQNKAVRFVLQGLDLGGIFAPNTLTRLDQLRILSLRNNSLTGSIPDLSLLVNLKALLLDHNDFTGSFPPSILFLHKLRILDFCHNKITGPIPYWLVNLEQLSYLRLDSNRFNGTLPALNQTALQTFNISINNLSGSIPVTLTLLRFGPSSFLWNPGLCGGIIQRECKLTQPFFGATTVEVEARPPVAALGESAEVKGVDQFVGSSGKTHKRTAVIVGFSSGVFLLVGSVLCFVMAVRKQSNNDKISTAKMESDKTSSPQSTAEVKVEQKMNELDVVNVNKSGKLVFCAGEAQLYTLDQLMRASAEFLGRGRVGTTYKAMLDNREIVTVKRLDACKMAGTSKESFERHMESLAGLGHPNLVPLRAYFHANEERFVVYDYQPNGSIFSLVHGTKSTKSKPLHWTSCLKIAEDVAQGLAYIHQAWKLVHGNLKPSNVLLGADFEARITDYCFAGHIISDFPSDDESNSSACRAPEARICNNRLTSKSDVYTFGILLFELLTGKLPSEHPFLAPYDMVDWVVSCRKDDRGGEERRLENLVEVAIACRVTSPEQRPTMRQVLKMLQEIKETVLMEYNEMETQIRIP 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9848049 9850784 + Conep07aG0139600.1 Cone7ag1355 441951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1355 660 Gene3D Ribonuclease Inhibitor 199 248 IPR032675 -
Cone7ag1355 660 FunFam Nuclear pore complex protein NUP107 39 196 - -
Cone7ag1355 660 Coils Coil 636 656 - -
Cone7ag1355 660 Pfam Protein kinase domain 384 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1355 660 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515(InterPro)
Cone7ag1355 660 SUPERFAMILY Protein kinase-like (PK-like) 384 648 IPR011009 -
Cone7ag1355 660 Gene3D Phosphorylase Kinase; domain 1 338 457 - -
Cone7ag1355 660 ProSiteProfiles Protein kinase domain profile. 380 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1355 660 Pfam Leucine Rich Repeat 108 125 IPR001611 GO:0005515(InterPro)
Cone7ag1355 660 SUPERFAMILY L domain-like 38 222 - -
Cone7ag1355 660 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515(InterPro)
Cone7ag1355 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 37 644 IPR046959 -
Cone7ag1355 660 Gene3D Transferase(Phosphotransferase) domain 1 459 658 - -
Cone7ag1355 660 Gene3D Ribonuclease Inhibitor 39 198 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1355 Cone-Chr7:9848049 Cone8ag0259 Cone-Chr8:1498559 3.39E-50 dispersed
Cone20ag0203 Cone-Chr20:874691 Cone7ag1355 Cone-Chr7:9848049 6.21E-249 wgd
Cone7ag1355 Cone-Chr7:9848049 Cone9ag1338 Cone-Chr9:10055351 1.36E-187 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83057 PF02309 AUX_IAA 6.50E-42 CL0072 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1355 - - - 0.0