Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1359 ATGGATTGTCTCTCTAGTCTTAAAGATCCACTTCCATTAAAATCCTTCTCGCTATTTCCCTCTTATTCCAATAAATCCATCTTCAATTTCACTCAAACCGTCGTCTTCACATCAAAACCATCATTCCAATCCCTTACTTCCCGCCGATGGCGGACCAAATCAGCCGCCGCCGCAGACGACGACGAGACTACGTCCTCCACAGCGGCAACCTCAGAGATCGACATGGTCAGGAACAAAGAAGGCGTTTTCACACCCAAACGGAACAAGGTCGTAGTGCTCTGGGACCTCGATAACAAGCCTCCCCGTGGGCCGCCATACCAAGCGGCCATGGCGCTAAAGGAAACCGCGCAACACTTTGGCGACGTGGTCGACATGTCGGCCTATGCAAACCGACACGCTTTTATCCACTTACCCCAGTGGGTACTAGCGGAACGGCGAGAGCGGAAGCAGTTGGACATTCTGGAACGCAAGGGGTTGGTCTCTCCGGACGAATCGTACGTGTGTGGAGTGTGTGGCCGGAAATGCAAAACGAACATGGACTTGAAGAAGCATTTCAAGCAGCTCCACGAACGCGAGAGGCAGAAGAAACTGGGCAGGATGAGGTCTTTGAAAGGCAAGAAACGACAGCGTTTTAAGGAGAGGTTTATATCAGGGAATCATAAGTACAACGAGGCGGCTAGTTCGTTGATAACGCCGAAGATTGGGTATGGGTTAGCGTCGGAGTTGAGGCGGGCGGGGGTTTATGTGAAGACGGTGGAGGATAAGCCACAGGCGGCGGATTGGGCGGTGAAGAGGCAGATGCAGCATTCTATGAGCCGTGGGATTGATTGGTTGTTTCTTGTATCGGACGATTCGGATTTTACGGAGATGTTGAGGAGGGCGAGGGAGGCCAATTTGGGGACGGTGATGAGGACTGGCTTACAGTTGGAAGGATTGGATTTGATGGGCTGA 951 52.05 MDCLSSLKDPLPLKSFSLFPSYSNKSIFNFTQTVVFTSKPSFQSLTSRRWRTKSAAAADDDETTSSTAATSEIDMVRNKEGVFTPKRNKVVVLWDLDNKPPRGPPYQAAMALKETAQHFGDVVDMSAYANRHAFIHLPQWVLAERRERKQLDILERKGLVSPDESYVCGVCGRKCKTNMDLKKHFKQLHERERQKKLGRMRSLKGKKRQRFKERFISGNHKYNEAASSLITPKIGYGLASELRRAGVYVKTVEDKPQAADWAVKRQMQHSMSRGIDWLFLVSDDSDFTEMLRRAREANLGTVMRTGLQLEGLDLMG 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9868179 9870098 + Conep07aG0140000.1 Cone7ag1359 441955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1359 316 ProSitePatterns Zinc finger C2H2 type domain signature. 168 189 IPR013087 -
Cone7ag1359 316 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 50 303 - -
Cone7ag1359 316 CDD PIN_LabA-like 176 302 - -
Cone7ag1359 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 194 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0282 Cone-Chr1:1947603 Cone7ag1359 Cone-Chr7:9868179 1.58E-61 transposed
Cone4ag1591 Cone-Chr4:12140853 Cone7ag1359 Cone-Chr7:9868179 1.32E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46551 PF00224 PK 1.80E-89 CL0151 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1359 - - - 0.0