Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1363 ATGTCCAACTATTCCTTCTTAAACGACCAGCTTTCAAAGCGAACCTCGATTTTCGGAATACGCTTATGGGTTGTTCTGGGCATATGCGTGGGAGCAGCCATAGTCCTTGTCCTCTTCCTAATCTCCCTCTGGTTCACTTCTCGCCGCAACAAATCCTCTAAACCTAAAAACCCCTCTCGTCAAAACCCATCCACTATTCCATACGTTTCCAAGGAAATCCAAGAAATCCAAATCCACCCTTCTCTCCACCCGTCTAACCCGGACCCGAAGACCCAATTAGTCCCCCAATCCGACCCGTATCCAGAAACAGAGCCCCTAGCCCTGCTTCTTCAGGCAGAGGAAGAAAGCCTAGTGGGTGGGCGTAATAGAATACACATCGAAATTGGAAAGGATCACCGAATTTCTTACCCTGAGCATGGAGGTGGATCATCGCATGGAAGCGTAGAAGCTCGCTCCGGTGATCAGACGGTAATTGCTGCGCCGGAAGTTTCTCATTTGGGGTGGGGCCATTGGTACACCCTTAGAGAGCTAGAAATCGCAACAAATGGGTTTGCCGATGAGAATGTGATCGGTGAAGGTGGGTACGGGATTGTTTACCGTGGCGTTTTTGAAGATAACAGTAATGTTGCCGTCAAGAATTTGCTCAATAACAGGGGACAAGCTGAGAGGGAGTTTAAGGTCGAGGTTGAAGCAATCGGACGTGTTCGACATAAAAATTTAGTGAGATTGCTTGGTTATTGTGCTGAAGGAGCTCATAGGATACTTATTTACGAGTATGTTGACAATGGAAACTTGGAACAATGGCTTCATGGAGATGTTGGGCCTTGCAGCCCACTTACATGGGATATCCGTATTAATATAATACTCGGCACTGCAAAAGGGCTGGCATACTTGCATGAGGGGCTTGAGCCTAAGGTTGTTCACCGGGATATTAAGTCAAGTAACATCTTGCTTGATAGACAATGGCATCCAAAAGTTTCGGACTTTGGCCTAGCTAAGCTTCTAGGCTCAGAGATGAGCTATGTGACTACTCGTGTCATGGGAACATTTGGATATGTAGCTCCAGAATATGCCAGTACCGGCATGTTAAACGAAAGAAGTGATGTGTACAGTTTTGGGATTCTCATTATGGAGATTCTTTCTGGTAGAAATCCCGTGGATTATAATCGCCCTACTGGAGAGGTGAACCTAGTGGAGTGGCTAAAGACTATGGTTACAAATAGGAATGCAGAGGGGGTTCTGGATCCAAAGTTGCCCGAAAAGCCTTCTTCGAGAGCACTCAAGCGGGTTCTTTTAGTAGCTTTACGTTGCGTGGACCCAAATGCACAAAAGAGGCCCAAGATGGGGCATGTCATACATATGCTTGAAGCTGATGAGTTTCCTTTTCGAGATGACCAGAGAGGTGGGAAAGAACAGGGCCGGACACAACGTGAAGGTCTTAGGGGCAGGCTAATGGACAGGATGGTGAGTGAATCGGGTGATAGTAGCGGAACTGAAAGTGTAGCTCAAAATAGAAGGCAGTTTTTAATAAAGCAGGAAACGGAGGAGCAGCCATAA 1557 46.76 MSNYSFLNDQLSKRTSIFGIRLWVVLGICVGAAIVLVLFLISLWFTSRRNKSSKPKNPSRQNPSTIPYVSKEIQEIQIHPSLHPSNPDPKTQLVPQSDPYPETEPLALLLQAEEESLVGGRNRIHIEIGKDHRISYPEHGGGSSHGSVEARSGDQTVIAAPEVSHLGWGHWYTLRELEIATNGFADENVIGEGGYGIVYRGVFEDNSNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRILIYEYVDNGNLEQWLHGDVGPCSPLTWDIRINIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWHPKVSDFGLAKLLGSEMSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEILSGRNPVDYNRPTGEVNLVEWLKTMVTNRNAEGVLDPKLPEKPSSRALKRVLLVALRCVDPNAQKRPKMGHVIHMLEADEFPFRDDQRGGKEQGRTQREGLRGRLMDRMVSESGDSSGTESVAQNRRQFLIKQETEEQP 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9883587 9886144 + Conep07aG0140400.1 Cone7ag1363 441959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1363 518 MobiDBLite consensus disorder prediction 462 518 - -
Cone7ag1363 518 MobiDBLite consensus disorder prediction 462 488 - -
Cone7ag1363 518 FunFam Putative receptor-like serine/threonine-protein kinase 260 470 - -
Cone7ag1363 518 CDD STKc_IRAK 190 456 - -
Cone7ag1363 518 ProSiteProfiles Protein kinase domain profile. 184 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1363 518 Pfam Protein kinase domain 186 453 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1363 518 Gene3D Transferase(Phosphotransferase) domain 1 260 467 - -
Cone7ag1363 518 PANTHER OS01G0323000 PROTEIN 5 498 IPR052232 -
Cone7ag1363 518 MobiDBLite consensus disorder prediction 491 508 - -
Cone7ag1363 518 Gene3D Phosphorylase Kinase; domain 1 154 259 - -
Cone7ag1363 518 SUPERFAMILY Protein kinase-like (PK-like) 166 456 IPR011009 -
Cone7ag1363 518 FunFam Probable serine/threonine-protein kinase At1g01540 164 259 - -
Cone7ag1363 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1363 518 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524(InterPro)
Cone7ag1363 518 SMART serkin_6 184 462 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1149 Cone-Chr12:9172547 Cone7ag1363 Cone-Chr7:9883587 1.03E-175 dispersed
Cone14ag0057 Cone-Chr14:335657 Cone7ag1363 Cone-Chr7:9883587 8.96E-110 dispersed
Cone14ag0379 Cone-Chr14:1772637 Cone7ag1363 Cone-Chr7:9883587 3.61E-211 dispersed
Cone15ag0416 Cone-Chr15:1952683 Cone7ag1363 Cone-Chr7:9883587 2.08E-204 dispersed
Cone5ag0098 Cone-Chr5:454772 Cone7ag1363 Cone-Chr7:9883587 5.06E-167 dispersed
Cone7ag1363 Cone-Chr7:9883587 Cone8ag1197 Cone-Chr8:10205338 9.83E-177 dispersed
Cone17ag0849 Cone-Chr17:6756706 Cone7ag1363 Cone-Chr7:9883587 1.02E-223 wgd
Cone20ag0197 Cone-Chr20:847514 Cone7ag1363 Cone-Chr7:9883587 1.59E-35 wgd
Cone4ag1586 Cone-Chr4:12122766 Cone7ag1363 Cone-Chr7:9883587 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83058 PF00631 G-gamma 4.50E-11 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1363 - - - 0.0