Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1368 | ATGGAGATGATGATGATGATGCAACAACAGATGGACAAAATCCCAGAATTCTGCAACTCGTACGATGACGCCAACGAATTTCAACCGTCAGATGATTTTTCCGGTGCAACCAATAGTAACACAACCGCTATACCGCATTGTCTCGAAACGCTCCAATCTACTTCACACTCCATGGTCATGATAAACTACCCATTCAATAGCCCATCTCACGATCACGACCATCCACGTGGACCAGTACCAGTCGTAGCACAAGACTTTCTATCCAACAACTCAAAGAACATGCAGCGGAACAGCTCCATGGCGGCCATGAGAGAGATGATATTCCGAATCGCGGCAATGCAGCCGATTCACATCGACCCGGAATCGGTAAAGCCACCAAAGAGGCGGAACGTGAGGATTTCAAAGGATCCGCAGAGCGTAGCGGCCAGGCATAGGAGAGAGAGGATAAGCGAGAGGATTAGAATACTGCAAAGGCTTGTGCCTGGAGGGACTAAAATGGATACAGCTTCCATGTTGGATGAAGCCATTCATTATGTTAAATTCTTGAAGACTCAAGTGCAGTCGTTGGAGAGGGCCTCGGCTAGTCGGCCGGCAGGTTCTTCAAATCCCGGGATTGGGTTGCCCGTGGCCATGTCTAGTGGTAGTAGCTGTTATCTTCCTGTGGCTAAAGCTACATCTATTAATTACCATGTTCGTCACTATGGCGATGCTTACCAGTAG | 720 | 48.33 | MEMMMMMQQQMDKIPEFCNSYDDANEFQPSDDFSGATNSNTTAIPHCLETLQSTSHSMVMINYPFNSPSHDHDHPRGPVPVVAQDFLSNNSKNMQRNSSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASASRPAGSSNPGIGLPVAMSSGSSCYLPVAKATSINYHVRHYGDAYQ | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9902948 | 9903667 | + | Conep07aG0140900.1 | Cone7ag1368 | 441964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1368 | 239 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 137 | 192 | IPR036638 | GO:0046983(InterPro) | |
Cone7ag1368 | 239 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 133 | 182 | IPR011598 | GO:0046983(InterPro) | |
Cone7ag1368 | 239 | SMART | finulus | 139 | 188 | IPR011598 | GO:0046983(InterPro) | |
Cone7ag1368 | 239 | Gene3D | - | 132 | 198 | IPR036638 | GO:0046983(InterPro) | |
Cone7ag1368 | 239 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 38 | 202 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1368 | 239 | Pfam | Helix-loop-helix DNA-binding domain | 142 | 183 | IPR011598 | GO:0046983(InterPro) | |
Cone7ag1368 | 239 | CDD | bHLH_AtIND_like | 134 | 190 | - | - | |
Cone7ag1368 | 239 | FunFam | BHLH transcription factor | 136 | 199 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0438 | Cone-Chr3:2138257 | Cone7ag1368 | Cone-Chr7:9902948 | 3.58E-21 | dispersed | |
Cone4ag0939 | Cone-Chr4:7843864 | Cone7ag1368 | Cone-Chr7:9902948 | 4.91E-33 | dispersed | |
Cone7ag1197 | Cone-Chr7:8908009 | Cone7ag1368 | Cone-Chr7:9902948 | 8.11E-33 | dispersed | |
Cone7ag1368 | Cone-Chr7:9902948 | Cone8ag0029 | Cone-Chr8:191897 | 1.43E-36 | dispersed | |
Cone7ag1362 | Cone-Chr7:9880700 | Cone7ag1368 | Cone-Chr7:9902948 | 2.06E-06 | proximal | |
Cone12ag0123 | Cone-Chr12:659774 | Cone7ag1368 | Cone-Chr7:9902948 | 1.93E-56 | wgd | |
Cone4ag1582 | Cone-Chr4:12098263 | Cone7ag1368 | Cone-Chr7:9902948 | 1.45E-89 | wgd | |
Cone7ag1368 | Cone-Chr7:9902948 | Cone8ag0130 | Cone-Chr8:670288 | 5.03E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46555 | PF00069 | Pkinase | 5.20E-48 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1368 | - | - | - | 0.0 |