Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1373 | ATGAATTTCAAGAATTTCGGAGACGACCCGCCGGCGGACAACGGCGGCGGCGGAAGAAATCAAGGAGACTTTCCGTTAGCGCGTCAATCGTCGATCTACTCTTTGACCTTCGATGAGTTTCAGAACACCATGGGTGGGATCGGAAAAGATTTCGGCTCTATGAACATGGACGAGCTATTAAAGAACATATGGAGCGCAGAAGAGACGCAAACCATGGCATCCATTACTTCGGCCGCCACACAAGGTCCCGTAACTTCTGCATCTGCCGCCGGAGCGGCCGCCTCAGCTGCCGGAGGGGTTTTTCCCGGTGCGTATTTACAGAGACAGGGTTCATTGACTCTTCCTCGAACACTAAGCCAGAAAACAGTAGATGAGGTCTGGAAAGATATTTCCAAAGAGTATCTAGGTGCTGTAGTAAAAGATGGAAGTGGTGGTGCCGCCTCTAATATGCCGCCACAAGCTCAGAGGCAGCAGACTCTAAGGGAAATGACTCTGGAGGAGTTCTTGGTCCGAGCCGGAGTTGTAAGAGAAGATGCTCAATTACCAACAAATACTGATAAAGGATTTTTCGGGAATTCTAGTTCCGGTTTAGGGATTAGTTTTCTGCAACAACCTGATCAGAACAGTAATAATAATGATCAAATCCAATATTCGAATTTACCGTTAAACGTTAATGGGGTTAGAGAAAATCAGCCAAAGCAGCAGCAGCAACAGCAACAACTGCATATTTTTCCGAAGCAAACGGTTTCTGTTACATATGGATCTCAGTTGGGGTTAAGCAATGCCCAGTTAGGTAGTCCAGCTGGAATTAGAGGTGGGATTATGGGGATTTCAGATCAGAGGTTGAATAATAATTTGATTCCAGGTGGAGGAGGAGGGGAGGGAATGGTTAGCTTAGGAGGCGGGGCTGTAACTGTCGTGACAGGATCTCCAGCAAACCAGCTGTCTTCTGATGGGATGGGGAAGAGTAATGGGACCACACCGTCCATGTCCCCGCGTTACTTGTTTAACGGCGGGTTGAGGGGAAGGAAAAGCGGCGGGGCCGTGGAAAAGGTTATTGAAAGGAGGCAGAGGAGAATGATAAAAAACCGAGAGTCGGCTGCTAGGTCTAGAGCCCGTAAGCAGGCATATACTATGGAGTTGGAAGCAGAAGTTGCGAAGTTAAAAGAAGAGAATGAAGAACTGCGGAAAAAACAGGAAGAAATCATGGAAATGCAGAAGAATCAGGCAATGGAGATGGAGCAACGGGGCCCAAAGAAGCGATGCATTAGAAGAACGCAGAGCGGTCCATGGTGA | 1296 | 47.99 | MNFKNFGDDPPADNGGGGRNQGDFPLARQSSIYSLTFDEFQNTMGGIGKDFGSMNMDELLKNIWSAEETQTMASITSAATQGPVTSASAAGAAASAAGGVFPGAYLQRQGSLTLPRTLSQKTVDEVWKDISKEYLGAVVKDGSGGAASNMPPQAQRQQTLREMTLEEFLVRAGVVREDAQLPTNTDKGFFGNSSSGLGISFLQQPDQNSNNNDQIQYSNLPLNVNGVRENQPKQQQQQQQLHIFPKQTVSVTYGSQLGLSNAQLGSPAGIRGGIMGISDQRLNNNLIPGGGGGEGMVSLGGGAVTVVTGSPANQLSSDGMGKSNGTTPSMSPRYLFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQEEIMEMQKNQAMEMEQRGPKKRCIRRTQSGPW | 431 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9924764 | 9927743 | - | Conep07aG0141400.1 | Cone7ag1373 | 441969 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1373 | 431 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 28 | 429 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Cone7ag1373 | 431 | SMART | brlzneu | 351 | 415 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1373 | 431 | CDD | bZIP_plant_BZIP46 | 355 | 409 | - | - | |
Cone7ag1373 | 431 | Coils | Coil | 371 | 416 | - | - | |
Cone7ag1373 | 431 | MobiDBLite | consensus disorder prediction | 410 | 431 | - | - | |
Cone7ag1373 | 431 | SUPERFAMILY | Leucine zipper domain | 355 | 404 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1373 | 431 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 358 | 373 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1373 | 431 | Pfam | bZIP transcription factor | 355 | 408 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1373 | 431 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 353 | 404 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone7ag1373 | 431 | Gene3D | - | 353 | 410 | - | - | |
Cone7ag1373 | 431 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cone7ag1373 | 431 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | 353 | 410 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag1183 | Cone-Chr13:9204339 | Cone7ag1373 | Cone-Chr7:9924764 | 4.33E-45 | dispersed | |
Cone19ag1165 | Cone-Chr19:8224294 | Cone7ag1373 | Cone-Chr7:9924764 | 1.27E-44 | dispersed | |
Cone7ag1373 | Cone-Chr7:9924764 | Cone8ag0972 | Cone-Chr8:9148632 | 8.98E-09 | dispersed | |
Cone12ag1087 | Cone-Chr12:8900849 | Cone7ag1373 | Cone-Chr7:9924764 | 2.25E-87 | wgd | |
Cone20ag0192 | Cone-Chr20:827743 | Cone7ag1373 | Cone-Chr7:9924764 | 7.09E-96 | wgd | |
Cone4ag1580 | Cone-Chr4:12088474 | Cone7ag1373 | Cone-Chr7:9924764 | 2.15E-215 | wgd | |
Cone7ag1373 | Cone-Chr7:9924764 | Cone8ag1129 | Cone-Chr8:9956494 | 4.36E-89 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46556 | PF00069 | Pkinase | 9.60E-40 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1373 | K14432 | - | vvi:100232889 | 448.743 |