Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1373 ATGAATTTCAAGAATTTCGGAGACGACCCGCCGGCGGACAACGGCGGCGGCGGAAGAAATCAAGGAGACTTTCCGTTAGCGCGTCAATCGTCGATCTACTCTTTGACCTTCGATGAGTTTCAGAACACCATGGGTGGGATCGGAAAAGATTTCGGCTCTATGAACATGGACGAGCTATTAAAGAACATATGGAGCGCAGAAGAGACGCAAACCATGGCATCCATTACTTCGGCCGCCACACAAGGTCCCGTAACTTCTGCATCTGCCGCCGGAGCGGCCGCCTCAGCTGCCGGAGGGGTTTTTCCCGGTGCGTATTTACAGAGACAGGGTTCATTGACTCTTCCTCGAACACTAAGCCAGAAAACAGTAGATGAGGTCTGGAAAGATATTTCCAAAGAGTATCTAGGTGCTGTAGTAAAAGATGGAAGTGGTGGTGCCGCCTCTAATATGCCGCCACAAGCTCAGAGGCAGCAGACTCTAAGGGAAATGACTCTGGAGGAGTTCTTGGTCCGAGCCGGAGTTGTAAGAGAAGATGCTCAATTACCAACAAATACTGATAAAGGATTTTTCGGGAATTCTAGTTCCGGTTTAGGGATTAGTTTTCTGCAACAACCTGATCAGAACAGTAATAATAATGATCAAATCCAATATTCGAATTTACCGTTAAACGTTAATGGGGTTAGAGAAAATCAGCCAAAGCAGCAGCAGCAACAGCAACAACTGCATATTTTTCCGAAGCAAACGGTTTCTGTTACATATGGATCTCAGTTGGGGTTAAGCAATGCCCAGTTAGGTAGTCCAGCTGGAATTAGAGGTGGGATTATGGGGATTTCAGATCAGAGGTTGAATAATAATTTGATTCCAGGTGGAGGAGGAGGGGAGGGAATGGTTAGCTTAGGAGGCGGGGCTGTAACTGTCGTGACAGGATCTCCAGCAAACCAGCTGTCTTCTGATGGGATGGGGAAGAGTAATGGGACCACACCGTCCATGTCCCCGCGTTACTTGTTTAACGGCGGGTTGAGGGGAAGGAAAAGCGGCGGGGCCGTGGAAAAGGTTATTGAAAGGAGGCAGAGGAGAATGATAAAAAACCGAGAGTCGGCTGCTAGGTCTAGAGCCCGTAAGCAGGCATATACTATGGAGTTGGAAGCAGAAGTTGCGAAGTTAAAAGAAGAGAATGAAGAACTGCGGAAAAAACAGGAAGAAATCATGGAAATGCAGAAGAATCAGGCAATGGAGATGGAGCAACGGGGCCCAAAGAAGCGATGCATTAGAAGAACGCAGAGCGGTCCATGGTGA 1296 47.99 MNFKNFGDDPPADNGGGGRNQGDFPLARQSSIYSLTFDEFQNTMGGIGKDFGSMNMDELLKNIWSAEETQTMASITSAATQGPVTSASAAGAAASAAGGVFPGAYLQRQGSLTLPRTLSQKTVDEVWKDISKEYLGAVVKDGSGGAASNMPPQAQRQQTLREMTLEEFLVRAGVVREDAQLPTNTDKGFFGNSSSGLGISFLQQPDQNSNNNDQIQYSNLPLNVNGVRENQPKQQQQQQQLHIFPKQTVSVTYGSQLGLSNAQLGSPAGIRGGIMGISDQRLNNNLIPGGGGGEGMVSLGGGAVTVVTGSPANQLSSDGMGKSNGTTPSMSPRYLFNGGLRGRKSGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQEEIMEMQKNQAMEMEQRGPKKRCIRRTQSGPW 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9924764 9927743 - Conep07aG0141400.1 Cone7ag1373 441969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1373 431 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 28 429 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cone7ag1373 431 SMART brlzneu 351 415 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1373 431 CDD bZIP_plant_BZIP46 355 409 - -
Cone7ag1373 431 Coils Coil 371 416 - -
Cone7ag1373 431 MobiDBLite consensus disorder prediction 410 431 - -
Cone7ag1373 431 SUPERFAMILY Leucine zipper domain 355 404 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1373 431 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 358 373 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1373 431 Pfam bZIP transcription factor 355 408 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1373 431 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 353 404 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone7ag1373 431 Gene3D - 353 410 - -
Cone7ag1373 431 MobiDBLite consensus disorder prediction 1 24 - -
Cone7ag1373 431 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 353 410 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1183 Cone-Chr13:9204339 Cone7ag1373 Cone-Chr7:9924764 4.33E-45 dispersed
Cone19ag1165 Cone-Chr19:8224294 Cone7ag1373 Cone-Chr7:9924764 1.27E-44 dispersed
Cone7ag1373 Cone-Chr7:9924764 Cone8ag0972 Cone-Chr8:9148632 8.98E-09 dispersed
Cone12ag1087 Cone-Chr12:8900849 Cone7ag1373 Cone-Chr7:9924764 2.25E-87 wgd
Cone20ag0192 Cone-Chr20:827743 Cone7ag1373 Cone-Chr7:9924764 7.09E-96 wgd
Cone4ag1580 Cone-Chr4:12088474 Cone7ag1373 Cone-Chr7:9924764 2.15E-215 wgd
Cone7ag1373 Cone-Chr7:9924764 Cone8ag1129 Cone-Chr8:9956494 4.36E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46556 PF00069 Pkinase 9.60E-40 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1373 K14432 - vvi:100232889 448.743