Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1375 | ATGGACGGCGGTGATGGTACCGTGAGGCTAGGGGCGTTGAATTTGAAATCGGATCGTGGCGGTATCGATTCAGGCCCGGACGTGTCCGTTTCATCGCCGGTGACCAGGCAGAAAGCGGCGGCTGCTAAGCAGTTTATTGAGAACCATTACAAGAATCATCTTAAAGGTCTGCAAGATCGCAAAGAGAGACGTCGAGCACTGCAGCTGAGAGCTGAAGAAGCTCAGGTGCCAATTGAAGAACAAGAGGAGATGCTGAGGAATTTGGAACGGAGGGAAACTGAATATATGAGGTTGCAAAGACGGAAAGTCGGTATTGATGATTTCGAGCAATTGACTGTTATTGGTAAAGGTGCATTTAGTGAGGTCAGGCTATGTCGTGCTAAAGGTACAGGGGAGATTTATGCCATGAAGAAATTGAAGAAGTCGGAGATGCTTCGTCGTGGGCAGGTTGAGCATGTCCGTTCTGAGAGGAACTTGCTAGCAGAGGTGGATAGTCGGTGCATTGTAAAACTCTTTTACTCTTTTCAAGATTCTGATTTCTTATACCTTATCATGGAGTATTTACCTGGTGGTGATATAATGACATTGCTAATGAGAGAAGACATTCTTTCTGAGGATATTGCACGTTTCTACATAGCGGAGAGCATTCTAGCCATTCATTCCATTCATCAGCACAACTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAAAACGGCCATTTGAAACTTTCAGATTTTGGTTTGTGTAAGCCGATGGATGAAAAGTATTCAACAATACTTTTGGAAGATGAAGAATCTATAAATCCCGAGTCTGAAACTCAGTCAGAAGGTGATAAATCCCCATGGCTGATGCCAAAAGAACAAATTCTTCAGTGGAAACGTAATCGCCGTGCATTGGCTTATTCAACAGTAGGGACACTTGACTATATGGCTCCAGAAGTTCTACTTAAGAAGGGATATGGAATTGAATGCGATTGGTGGTCACTAGGGGCTATTATGTATGAGATGCTAATAGGCTATCCTCCTTTCTTTTCTGATGATCCGAGGATTACATGCCGCAGGATAGTGAACTGGAGAACATTCCTGAAGTTTCCCGGCGAAATAAAAATATCAGAAGAGGCTAAGGATCTCATCTGTCACTTGTTATGCGATGTTGAAACAAGGTTGGGAACTCGAGGAGTGGAAGAAATAAAGGCACATCCATGGTTCTCTGGCGTTCAATGGGACAGGCTTTATGAAATGGAAGCTGCTTATAAACCGCTTGTCACTGGAGACCAGGACACACAAAATTTCGAAAAGTTTCCCGAAGTAGAAGACCCAGCACCAATAGTCCCAGTGGGACCTTGGCGGAAGATGTTGACATCAAAGGATACCAACTTCATCGGATTTACGTTTAACAAATCAGATGTTCTTAAATCACTAGAAAGCTCAGGTACAGATGTGAGACATAATGGATCTTCAAATTCCCCATCCCTGATATCCTTGTTAGGTCGGATTGAATTGGACGAAACTGTGATATCAGAAGATGAACGAGCCGAGGCATGA | 1557 | 43.29 | MDGGDGTVRLGALNLKSDRGGIDSGPDVSVSSPVTRQKAAAAKQFIENHYKNHLKGLQDRKERRRALQLRAEEAQVPIEEQEEMLRNLERRETEYMRLQRRKVGIDDFEQLTVIGKGAFSEVRLCRAKGTGEIYAMKKLKKSEMLRRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDIARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPMDEKYSTILLEDEESINPESETQSEGDKSPWLMPKEQILQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFFSDDPRITCRRIVNWRTFLKFPGEIKISEEAKDLICHLLCDVETRLGTRGVEEIKAHPWFSGVQWDRLYEMEAAYKPLVTGDQDTQNFEKFPEVEDPAPIVPVGPWRKMLTSKDTNFIGFTFNKSDVLKSLESSGTDVRHNGSSNSPSLISLLGRIELDETVISEDERAEA | 518 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9934071 | 9937997 | + | Conep07aG0141600.1 | Cone7ag1375 | 441971 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1375 | 518 | SMART | pkinase_C_6 | 408 | 471 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | Gene3D | Transferase(Phosphotransferase) domain 1 | 194 | 424 | - | - | |
Cone7ag1375 | 518 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 456 | IPR011009 | - | |
Cone7ag1375 | 518 | FunFam | Non-specific serine/threonine protein kinase | 79 | 191 | - | - | |
Cone7ag1375 | 518 | Pfam | Protein kinase C terminal domain | 426 | 469 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 41 | 471 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cone7ag1375 | 518 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cone7ag1375 | 518 | Pfam | Protein kinase domain | 304 | 407 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | Pfam | Protein kinase domain | 108 | 260 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | FunFam | Non-specific serine/threonine protein kinase | 306 | 425 | - | - | |
Cone7ag1375 | 518 | Gene3D | Phosphorylase Kinase; domain 1 | 99 | 193 | - | - | |
Cone7ag1375 | 518 | Coils | Coil | 71 | 101 | - | - | |
Cone7ag1375 | 518 | ProSiteProfiles | Protein kinase domain profile. | 108 | 407 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 227 | 239 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | ProSitePatterns | Protein kinases ATP-binding region signature. | 114 | 137 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag1375 | 518 | CDD | STKc_NDR_like | 106 | 470 | - | - | |
Cone7ag1375 | 518 | FunFam | Non-specific serine/threonine protein kinase | 192 | 259 | - | - | |
Cone7ag1375 | 518 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 408 | 479 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | SMART | serkin_6 | 108 | 407 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1375 | 518 | CDD | MobB_NDR_LATS-like | 42 | 103 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone7ag1274 | Cone-Chr7:9450042 | Cone7ag1375 | Cone-Chr7:9934071 | 2.07E-203 | dispersed | |
Cone7ag1375 | Cone-Chr7:9934071 | Cone4ag0668 | Cone-Chr4:3296691 | 1.56E-32 | dispersed | |
Cone4ag1578 | Cone-Chr4:12080796 | Cone7ag1375 | Cone-Chr7:9934071 | 3.84E-14 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83059 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1375 | K08790 | - | mdm:114821550 | 874.004 |