Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1375 ATGGACGGCGGTGATGGTACCGTGAGGCTAGGGGCGTTGAATTTGAAATCGGATCGTGGCGGTATCGATTCAGGCCCGGACGTGTCCGTTTCATCGCCGGTGACCAGGCAGAAAGCGGCGGCTGCTAAGCAGTTTATTGAGAACCATTACAAGAATCATCTTAAAGGTCTGCAAGATCGCAAAGAGAGACGTCGAGCACTGCAGCTGAGAGCTGAAGAAGCTCAGGTGCCAATTGAAGAACAAGAGGAGATGCTGAGGAATTTGGAACGGAGGGAAACTGAATATATGAGGTTGCAAAGACGGAAAGTCGGTATTGATGATTTCGAGCAATTGACTGTTATTGGTAAAGGTGCATTTAGTGAGGTCAGGCTATGTCGTGCTAAAGGTACAGGGGAGATTTATGCCATGAAGAAATTGAAGAAGTCGGAGATGCTTCGTCGTGGGCAGGTTGAGCATGTCCGTTCTGAGAGGAACTTGCTAGCAGAGGTGGATAGTCGGTGCATTGTAAAACTCTTTTACTCTTTTCAAGATTCTGATTTCTTATACCTTATCATGGAGTATTTACCTGGTGGTGATATAATGACATTGCTAATGAGAGAAGACATTCTTTCTGAGGATATTGCACGTTTCTACATAGCGGAGAGCATTCTAGCCATTCATTCCATTCATCAGCACAACTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAAAACGGCCATTTGAAACTTTCAGATTTTGGTTTGTGTAAGCCGATGGATGAAAAGTATTCAACAATACTTTTGGAAGATGAAGAATCTATAAATCCCGAGTCTGAAACTCAGTCAGAAGGTGATAAATCCCCATGGCTGATGCCAAAAGAACAAATTCTTCAGTGGAAACGTAATCGCCGTGCATTGGCTTATTCAACAGTAGGGACACTTGACTATATGGCTCCAGAAGTTCTACTTAAGAAGGGATATGGAATTGAATGCGATTGGTGGTCACTAGGGGCTATTATGTATGAGATGCTAATAGGCTATCCTCCTTTCTTTTCTGATGATCCGAGGATTACATGCCGCAGGATAGTGAACTGGAGAACATTCCTGAAGTTTCCCGGCGAAATAAAAATATCAGAAGAGGCTAAGGATCTCATCTGTCACTTGTTATGCGATGTTGAAACAAGGTTGGGAACTCGAGGAGTGGAAGAAATAAAGGCACATCCATGGTTCTCTGGCGTTCAATGGGACAGGCTTTATGAAATGGAAGCTGCTTATAAACCGCTTGTCACTGGAGACCAGGACACACAAAATTTCGAAAAGTTTCCCGAAGTAGAAGACCCAGCACCAATAGTCCCAGTGGGACCTTGGCGGAAGATGTTGACATCAAAGGATACCAACTTCATCGGATTTACGTTTAACAAATCAGATGTTCTTAAATCACTAGAAAGCTCAGGTACAGATGTGAGACATAATGGATCTTCAAATTCCCCATCCCTGATATCCTTGTTAGGTCGGATTGAATTGGACGAAACTGTGATATCAGAAGATGAACGAGCCGAGGCATGA 1557 43.29 MDGGDGTVRLGALNLKSDRGGIDSGPDVSVSSPVTRQKAAAAKQFIENHYKNHLKGLQDRKERRRALQLRAEEAQVPIEEQEEMLRNLERRETEYMRLQRRKVGIDDFEQLTVIGKGAFSEVRLCRAKGTGEIYAMKKLKKSEMLRRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDIARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPMDEKYSTILLEDEESINPESETQSEGDKSPWLMPKEQILQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFFSDDPRITCRRIVNWRTFLKFPGEIKISEEAKDLICHLLCDVETRLGTRGVEEIKAHPWFSGVQWDRLYEMEAAYKPLVTGDQDTQNFEKFPEVEDPAPIVPVGPWRKMLTSKDTNFIGFTFNKSDVLKSLESSGTDVRHNGSSNSPSLISLLGRIELDETVISEDERAEA 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9934071 9937997 + Conep07aG0141600.1 Cone7ag1375 441971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1375 518 SMART pkinase_C_6 408 471 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 Gene3D Transferase(Phosphotransferase) domain 1 194 424 - -
Cone7ag1375 518 SUPERFAMILY Protein kinase-like (PK-like) 83 456 IPR011009 -
Cone7ag1375 518 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Cone7ag1375 518 Pfam Protein kinase C terminal domain 426 469 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 471 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cone7ag1375 518 MobiDBLite consensus disorder prediction 1 36 - -
Cone7ag1375 518 Pfam Protein kinase domain 304 407 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 Pfam Protein kinase domain 108 260 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 FunFam Non-specific serine/threonine protein kinase 306 425 - -
Cone7ag1375 518 Gene3D Phosphorylase Kinase; domain 1 99 193 - -
Cone7ag1375 518 Coils Coil 71 101 - -
Cone7ag1375 518 ProSiteProfiles Protein kinase domain profile. 108 407 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524(InterPro)
Cone7ag1375 518 CDD STKc_NDR_like 106 470 - -
Cone7ag1375 518 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Cone7ag1375 518 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 479 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 SMART serkin_6 108 407 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1375 518 CDD MobB_NDR_LATS-like 42 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1274 Cone-Chr7:9450042 Cone7ag1375 Cone-Chr7:9934071 2.07E-203 dispersed
Cone7ag1375 Cone-Chr7:9934071 Cone4ag0668 Cone-Chr4:3296691 1.56E-32 dispersed
Cone4ag1578 Cone-Chr4:12080796 Cone7ag1375 Cone-Chr7:9934071 3.84E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83059 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1375 K08790 - mdm:114821550 874.004