Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag1386 | ATGGTTCTTGAATGTTGTCATGGGATGCCCCCTGCAGCTGCAGCTGCACAAATTGTCAAAGAAGCTGTAGGCTCTAAGGGACTTAGAGATGACACTACATGCATTGTAATTGACATTTTACCGCAAGAAAAACCACCCGAGCCTTTGCTAGTACCAAAGAAACCAGGTAAGCGAATGTTCAAGTTCATATTTCGGAGAAACCCATCCAAGTCATCTTCACATTGCGAAAACAAATACTTAGAGCCAGATATGACTCAAGAATTGTTCGAGGAAGGGTCTGCTATGCTTTCAGAAAGGTTAAACTCAAAGTATCCGCTCTGCAACATGTTTAAGTTGTTTATATGTTCCATTTGCCAAATAGAGATGAAACCCAGAGAGGGAATTTCCATACATGCCAGCTCATCTCACTCAGGGACATTGCGTCCATGGGATGGCCCTTTTTTATGTATAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAAAGACCGTCAGGAGACAGGCTCAGCAGTGCAAGTGATGACTAGCCCACTTGCTACTTCCACCTTTTAG | 555 | 43.42 | MVLECCHGMPPAAAAAQIVKEAVGSKGLRDDTTCIVIDILPQEKPPEPLLVPKKPGKRMFKFIFRRNPSKSSSHCENKYLEPDMTQELFEEGSAMLSERLNSKYPLCNMFKLFICSICQIEMKPREGISIHASSSHSGTLRPWDGPFLCISCQEKKEAMEGKKDRQETGSAVQVMTSPLATSTF | 184 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 9975888 | 9979061 | - | Conep07aG0142700.1 | Cone7ag1386 | 441982 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag1386 | 184 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 115 | 136 | IPR013087 | - | |
| Cone7ag1386 | 184 | MobiDBLite | consensus disorder prediction | 159 | 184 | - | - | |
| Cone7ag1386 | 184 | MobiDBLite | consensus disorder prediction | 169 | 184 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone5ag0061 | Cone-Chr5:306019 | Cone7ag1386 | Cone-Chr7:9975888 | 8.15E-44 | dispersed | |
| Cone17ag0840 | Cone-Chr17:6701476 | Cone7ag1386 | Cone-Chr7:9975888 | 2.88E-74 | wgd | |
| Cone20ag0184 | Cone-Chr20:794121 | Cone7ag1386 | Cone-Chr7:9975888 | 8.88E-74 | wgd | |
| Cone4ag1564 | Cone-Chr4:12007728 | Cone7ag1386 | Cone-Chr7:9975888 | 6.92E-97 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag1386 | - | - | - | 0.0 |