Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1397 ATGACGGTTTCCGGTGACCTTGCTACGTCCGTCGCTCAGAAATCTTTGGATTCTAAATTCTCGCTGAACCTTTCAGAATCTCAAAGGAAGCTCAGGTACCTTACTGATAAGGAGGCCCGCTTATTTTCCACTCAGCAACCTCTTCCGTCGCCGAATTCTCCTCCCACTGCCGTCGATCGCTGGTCCTCGGTAGCGATACCGCAACCTCTGCCGCTCCCTGATTTGTGTTGGATTAGGACAGTCGCGTCAGCCGCTTCGCCTTTCACTTCGGACCAAGGTCATACTCTATCGCGGAAAGGAACTACAAGGAGTGATAGGGGACTCTTAAGAGATGTAAACCGTGAAGGGGTACGATATAAGTTAACACTGAATTTCACGGCAAGGAGTGCTCTGACAAGTGTTCTATCAAGCCCGACCCGTAGTCCACAAAAATCAAACACTAGAGATTGTTTCAGTACATGCATGGCTTCTCGAGAATATCCCATTGGATCACCTGTAAAAGCTACACATAGTTCTGATCACTCGCCTCTTAGAAGCCCGACAGCTAGAAGTCCACATCTAAACTCTAGATGTCCTAATACAATTGTCGCGCCAGAAAGCAGCTGTCAAGCCAATATTGTCCACCCCTTGCCCCGTCCTCCTGGACCAAATATTCATAGTTTTATGGAAAAGCCAAATGTTTCATCAGTGAAAGGCCAATGGCAGAAAGGAAGGCTTATTGGTCGTGGTACATTTGGAAGTGTGTATCTTGCAACTAATCGAGAGACTGGAGCTTTATGTGCAATGAAGGAGGTTGACCTCATTCCCGATGACCCTAAATCTGCTGAATGTATAAAGCAATTGGAGCAGGAAATTAAAGTACTGCATCAGCTAAAGCATCAGAATATCGTGCAGTTCTATGGGAGTGAAATAATTGATGATCATTTTTATATATATTTGGAGTATATTTATCCTGGATCAATCAATAAATATGTCCGTGATCATTGTGGGGCTATAACACAATGTGTAGTTCGCAATTTCACCCGCCATATTCTCTCTGGCTTGGCTTTCTTGCATGCCACAAAGACTATCCACAGGGATATTAAAGGGGCAAATTTGCTTGTTGATTCGGCAGGTGTTGTTAAACTTGCTGATTTTGGGATGGCTAAACATCTCATAGGACAATATGATCTATCTTTAAAGGGTAGTCCACACTGGATGGCTCCCGAGGTGATAAAGGCTGCAATTCAAAAAGAGACGAATCCCAATCACGCTTTTGGAGCAGATATATGGAGCTTGGGCTGTACTGTCATCGAGATGCTGAATGGAAAACCTCCGTGGAGTGAGTTTGAAGGGCCTCAAGCTATGTTCAAGATCTTGAATAAAAGTCCACCTATACCAGAAACATTGTCTTCAGAAGGGAAGGACTTCCTCCATTGTTGCTTTCGGAGAAATCCAGCAGATAGGCCCTCTGCGTCTAAGCTACTTGAGCACCCTTTTGTACAAAATGTTCCAGTAGCTTTCCATGCTTCTTTCCCTGCAACAAACTAA 1530 44.58 MTVSGDLATSVAQKSLDSKFSLNLSESQRKLRYLTDKEARLFSTQQPLPSPNSPPTAVDRWSSVAIPQPLPLPDLCWIRTVASAASPFTSDQGHTLSRKGTTRSDRGLLRDVNREGVRYKLTLNFTARSALTSVLSSPTRSPQKSNTRDCFSTCMASREYPIGSPVKATHSSDHSPLRSPTARSPHLNSRCPNTIVAPESSCQANIVHPLPRPPGPNIHSFMEKPNVSSVKGQWQKGRLIGRGTFGSVYLATNRETGALCAMKEVDLIPDDPKSAECIKQLEQEIKVLHQLKHQNIVQFYGSEIIDDHFYIYLEYIYPGSINKYVRDHCGAITQCVVRNFTRHILSGLAFLHATKTIHRDIKGANLLVDSAGVVKLADFGMAKHLIGQYDLSLKGSPHWMAPEVIKAAIQKETNPNHAFGADIWSLGCTVIEMLNGKPPWSEFEGPQAMFKILNKSPPIPETLSSEGKDFLHCCFRRNPADRPSASKLLEHPFVQNVPVAFHASFPATN 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10015837 10019284 + Conep07aG0143900.1 Cone7ag1397 441993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1397 509 SMART serkin_6 234 494 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1397 509 SUPERFAMILY Protein kinase-like (PK-like) 230 501 IPR011009 -
Cone7ag1397 509 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524(InterPro)
Cone7ag1397 509 MobiDBLite consensus disorder prediction 168 189 - -
Cone7ag1397 509 FunFam Predicted protein 230 509 - -
Cone7ag1397 509 Pfam Protein kinase domain 235 494 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1397 509 ProSiteProfiles Protein kinase domain profile. 234 494 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1397 509 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 42 496 IPR050538 -
Cone7ag1397 509 MobiDBLite consensus disorder prediction 163 189 - -
Cone7ag1397 509 Gene3D Transferase(Phosphotransferase) domain 1 231 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0109 Cone-Chr12:567623 Cone7ag1397 Cone-Chr7:10015837 1.37E-29 dispersed
Cone7ag1397 Cone-Chr7:10015837 Cone8ag0112 Cone-Chr8:570627 4.27E-149 dispersed
Cone12ag0023 Cone-Chr12:182913 Cone7ag1397 Cone-Chr7:10015837 7.09E-94 wgd
Cone4ag1555 Cone-Chr4:11959759 Cone7ag1397 Cone-Chr7:10015837 7.37E-305 wgd
Cone6ag1378 Cone-Chr6:11065392 Cone7ag1397 Cone-Chr7:10015837 3.50E-122 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83060 PF13236 CLU 3.90E-83 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1397 - - - 0.0