Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1408 ATGGATTCCTTTCTCCCGTTTCCAAACACCACCATTATAACTGGAATATTCTCCATCATACTCATTTTTTCCTACTTTTTTCCAAGGATCTTCAGAACTGCACCTAAACGCCAAAAACTAGTCCCTGAAATCGCCGGCGGGTGGCCTCTGATCGGCCACCTTCCTCTTCTCCGTGGCCCGCAGCTGCCCCACATAATATTGGGCTCCTTGGCAGATAAATATGGTCCAATATTCCGCATCCGAATGGGGGTCCACTCTGCTCTGGTCATAAGCAGCTCGGAAGTAGCTAAAGAATGCTACACTACAAATGACGGGTTCGTTTCTTCGCGCCCCAAATTCGCTGGCGCGAAACACTTGGGCTATAACTACGCTAACTTTGGGTTCGCGCCATACGGTGCGTTTTGGCGCGACCTGCGCAAGATCGCCGCCGCCGAGCTCCTGTCAAACCGCCGTTTGGATCTACGCAGACACGTCCGCGTTTCCGAAGTCAAAGGCGCGGTGAAAGATCTGTACAGGCTATGGACCGATAGCGAATCTAATGATTCAGTTGTGGAGATGAAGCAGTGGATGGGGGATATTAATCTGAACGTCATTCTTCAGATGGTTTGTGGGAAGCGGTTCTTCGGATCCGGTTCTGTTTCTAATAACGACGACGCGATACAGGTCAGAAGATGCCGGAAATTATTCAGAGAGTGGTTCGCTTTGACCGGCGTGGTTGTTGCCAGCGATGCGCTGCCGTTTCTTGGGTGGTTGGATTTGGGAGGTTATGAAAAGGCCATGAAGAAAACCGCAAAGGAACTGGACGATCTCGTTGTCGAATGGTTGGAAGAACATCGTCAGAACAGAGATTCCGGTGGGCCAAAGAGTGAAGGTGACGAGGATTTCATGGATATCTTGCTCTCAGTCCTACGTGGCATAGACCTCTCTGGCTTTGATGCTGACACCGTTAATAAAGCCACTTGCTCAACTATTCTAGCCGGGGCAACTGATACGACGACAGTTACATTAACTTGGGCGCTGTCGTTATTACTGAACAGCCGGGAAGTATTGAGGAAGGTTCAAGAAGAACTAGACATTCATGTCGGCAAAGAACGGCTTGTGGACGAATCAGATGTCGGCAAGTTGGTCTATCTCCATGCGGTGATTAAAGAGACGCTGCGTTTATGTCCAGCTGGGCCACTTTCAGGCCCAAGAGAATTCACCGAAAACTGCACTATTGCGGGCTACCATGTCCCTGCAGGGACAAGGCTACTCACAAACCTTTGGAAAATACAAACGGATCCTCAAATTTGGGCCGACCCATTAAAGTTCAAGCCTGAGAGATTTTTGACGACGCATAAGGAGGTTGACGTGAGGGGACAGCATTTTGAGCTGATTCCATTTGGAGCTGGGAGAAGGTCATGTCCTGGGATAACCTTTGGGCTTCAAATGACCCATTTGGTGCTTGCTAGCTTGATCCATGCGTTTGAGATTACTACTCCCATGGATGCCCCTGTTGATATGACTGCTAGTTTTGGGCTCACTAATATCAAATCCGGCCCACTTGAAGTTGTCATCAAACCACGCTTATCTCCTACTGTGTATGAATGA 1590 49.06 MDSFLPFPNTTIITGIFSIILIFSYFFPRIFRTAPKRQKLVPEIAGGWPLIGHLPLLRGPQLPHIILGSLADKYGPIFRIRMGVHSALVISSSEVAKECYTTNDGFVSSRPKFAGAKHLGYNYANFGFAPYGAFWRDLRKIAAAELLSNRRLDLRRHVRVSEVKGAVKDLYRLWTDSESNDSVVEMKQWMGDINLNVILQMVCGKRFFGSGSVSNNDDAIQVRRCRKLFREWFALTGVVVASDALPFLGWLDLGGYEKAMKKTAKELDDLVVEWLEEHRQNRDSGGPKSEGDEDFMDILLSVLRGIDLSGFDADTVNKATCSTILAGATDTTTVTLTWALSLLLNSREVLRKVQEELDIHVGKERLVDESDVGKLVYLHAVIKETLRLCPAGPLSGPREFTENCTIAGYHVPAGTRLLTNLWKIQTDPQIWADPLKFKPERFLTTHKEVDVRGQHFELIPFGAGRRSCPGITFGLQMTHLVLASLIHAFEITTPMDAPVDMTASFGLTNIKSGPLEVVIKPRLSPTVYE 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10069988 10071707 + Conep07aG0145000.1 Cone7ag1408 442004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1408 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone7ag1408 529 FunFam Cytochrome P450 82C4 32 520 - -
Cone7ag1408 529 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 Pfam Cytochrome P450 46 506 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 CDD CYP82 75 522 - -
Cone7ag1408 529 Gene3D Cytochrome P450 31 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone7ag1408 529 PANTHER CYTOCHROME P450 82C3-RELATED 19 524 IPR050651 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1115 Cone-Chr10:7950310 Cone7ag1408 Cone-Chr7:10069988 8.68E-164 dispersed
Cone7ag1408 Cone-Chr7:10069988 Cone9ag1354 Cone-Chr9:10143679 3.30E-103 dispersed
Cone7ag1403 Cone-Chr7:10045225 Cone7ag1408 Cone-Chr7:10069988 1.61E-34 proximal
Cone7ag1408 Cone-Chr7:10069988 Cone7ag1411 Cone-Chr7:10084772 0 proximal
Cone12ag0076 Cone-Chr12:414438 Cone7ag1408 Cone-Chr7:10069988 4.02E-35 wgd
Cone20ag0162 Cone-Chr20:705668 Cone7ag1408 Cone-Chr7:10069988 4.28E-49 wgd
Cone4ag1543 Cone-Chr4:11909302 Cone7ag1408 Cone-Chr7:10069988 1.19E-132 wgd
Cone7ag1408 Cone-Chr7:10069988 Cone9ag1296 Cone-Chr9:9722159 1.68E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1408 - - - 0.0