Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone7ag1411 | ATGGATGCCTTTCTCCCGTTTCCAAACACCACCATAATAACTGGAATATTCTCCATCATACTCATTTTTTCCTACTTTTTTCCAAGGATCTTCAGAATTGCACCTAAACGCCAAAAACTAGTCCCTGAAATCGCCGGCGGGTGGCCTCTGATCGGCCACCTTCCTCTCCTCCGTGGCCCGCAGCTGCCCCACATAATATTGGGCTCCTTGGCAGATAAATATGGCCCAATATTCCGCATCCGAATGGGGGTCCACTCTGCTCTGGTCATAAGCAGCTCGGAAGTAGCTAAAGAATGCTACACTACAAATGACGGGTTCGTTTCTTCGCGCCCCAAATTCGCTGGCGCGAAACACTTGGGCTATAACTACGCTAACTTTGGGTTCGCGCCATACGGTGCGTTTTGGCGCGACCTGCGCAAGATCACCGCCGCCGAGCTCCTGTCAAACCGCCGTTTGGATCTACGCAGACACGTCCGCGTTTCCGAAGTCAAAGGCGCGGTGAAAGATCTGTACAGGCTATGGACCGATAGCGAATCTAATGATTCAGTTGTGGAGATGAAGCAGTGGATGGGGGATATTAATCTGAACGTCATTCTTCAGATGGTTTGTGGGAAGCGGTTCTTTGGATCCGGTTCTGTTTCTAATAACGACGACGCGATACAGGTCAGAATATGCCGGAAATTATTCAGAGAGTGGTTCGCTTTGACCGGCGTGGTTGTTGCCGGCGATGCGCTGCCGTTTCTTGGGTGGTTGGATTTGGGAGGTTATGAAAAGGCCATGAAGAAAACCGCAAAGGAACTGGACGATCTCGTTGTCGAATGGTTGGAAGAACATCGTCAGAACAGAGATTCCGGTGGGCCAAAGAGTGAAGGTGACGAGGATTTCATGGATATCTTGCTCTCAGTCCTACGTGGCATAGATCTCTCTGGCTTTGATGCTGATACCGTTAATAAAGCCACTTGCTCGACTATTCTAGCCGGGGCAACTGATACGACGACAGTTACATTAACTTGGGCGCTGTCGTTATTACTGAACAGCCGGGAAGTATTGAGGAAGGTTCAAGAAGAACTAGACATTCATGTCGGCAAAGAACGGCTTGTGGACGAATCAGATGTCGGCAAGTTGGTCTATCTCCATGCGGTGATTAAAGAGACGCTGCGTTTATGTCCAGCTGGGCCACTTTCAGGCCCAAGAGAATTCACCGAAAACTGCACTATTGCGGGCTACCATGTCCCTGCAGGGACAAGGCTACTCACAAACCTTTGGAAAATACAAACGGATCCTCAAATTTGGGCCGACCCATTAGAGTTCAAGCCTGAGAGATTTTTGACGACGCATAAGGAGGTTGACGTGAGGGGACAGCATTTTGAGCTGATTCCATTTGGAGCTGGGAGAAGGTCATGTCCTGGGATAACTTTTGGGCTTCAAATGACCCATTTGGTGCTTGCTAGCTTGATCCATGCGTTTGAGATTACTACTCCCACGGATGCCCCTGTTGATATGACTGCTAGTTTTGGGCTCACTAATATCAAATCCGGCCCACTTGAAGTTGTCATCAAACCACGCCTATCTTCTATTGTGTATGAATGA | 1590 | 48.99 | MDAFLPFPNTTIITGIFSIILIFSYFFPRIFRIAPKRQKLVPEIAGGWPLIGHLPLLRGPQLPHIILGSLADKYGPIFRIRMGVHSALVISSSEVAKECYTTNDGFVSSRPKFAGAKHLGYNYANFGFAPYGAFWRDLRKITAAELLSNRRLDLRRHVRVSEVKGAVKDLYRLWTDSESNDSVVEMKQWMGDINLNVILQMVCGKRFFGSGSVSNNDDAIQVRICRKLFREWFALTGVVVAGDALPFLGWLDLGGYEKAMKKTAKELDDLVVEWLEEHRQNRDSGGPKSEGDEDFMDILLSVLRGIDLSGFDADTVNKATCSTILAGATDTTTVTLTWALSLLLNSREVLRKVQEELDIHVGKERLVDESDVGKLVYLHAVIKETLRLCPAGPLSGPREFTENCTIAGYHVPAGTRLLTNLWKIQTDPQIWADPLEFKPERFLTTHKEVDVRGQHFELIPFGAGRRSCPGITFGLQMTHLVLASLIHAFEITTPTDAPVDMTASFGLTNIKSGPLEVVIKPRLSSIVYE | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 10084772 | 10086467 | + | Conep07aG0145300.1 | Cone7ag1411 | 442007 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone7ag1411 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone7ag1411 | 529 | PANTHER | CYTOCHROME P450 82C3-RELATED | 19 | 525 | IPR050651 | - | |
| Cone7ag1411 | 529 | CDD | CYP82 | 75 | 522 | - | - | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 95 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | FunFam | Cytochrome P450 82C4 | 32 | 520 | - | - | |
| Cone7ag1411 | 529 | SUPERFAMILY | Cytochrome P450 | 47 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | Gene3D | Cytochrome P450 | 32 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone7ag1411 | 529 | Pfam | Cytochrome P450 | 46 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag1166 | Cone-Chr12:9268767 | Cone7ag1411 | Cone-Chr7:10084772 | 4.25E-157 | dispersed | |
| Cone20ag0162 | Cone-Chr20:705668 | Cone7ag1411 | Cone-Chr7:10084772 | 2.19E-49 | dispersed | |
| Cone4ag1543 | Cone-Chr4:11909302 | Cone7ag1411 | Cone-Chr7:10084772 | 2.39E-132 | dispersed | |
| Cone4ag1876 | Cone-Chr4:13422523 | Cone7ag1411 | Cone-Chr7:10084772 | 2.50E-212 | dispersed | |
| Cone4ag1877 | Cone-Chr4:13424752 | Cone7ag1411 | Cone-Chr7:10084772 | 4.41E-53 | dispersed | |
| Cone7ag1411 | Cone-Chr7:10084772 | Cone9ag1354 | Cone-Chr9:10143679 | 4.21E-104 | dispersed | |
| Cone7ag1408 | Cone-Chr7:10069988 | Cone7ag1411 | Cone-Chr7:10084772 | 0 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone7ag1411 | - | - | - | 0.0 |