Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1435 ATGTTGACACAAACATCATCGGAAACGGGCCACCTTCTGTCACTGGCCGACCGCCGGCCCAACTCCATTGAAATCAACTTCAATCTCGGTCCAAAATCTTCAACCAGCTACTATGATTCACTCCCTTCTATATACTCCAAGTCCTATGATTTTAACATGGTTATCAAAGACAAAGCATACTTCAAACGCTTCCTATACATTTCACTCACAATACTTGTCCTCATTCTAGCACTCCTACTTCTAGCACACTTTTTGTTACGCAAACATAATCACCATCACCCTTCAGACAACCTCAGATTCGCAGTTAATCATGCTCTGACCTTTTTCGACGCGCAGAAGTCTGGTCACTACCCGAACAACAGTCCGGTGAAATTCCGAGGTGATTCGGGATTGAAAGATGGGGATTCAAGCAATTCAGAAGCTGATCTTGTCGGTGGATTCTATGATTCTGGAAACAATATAAAGTTTACTTTCACTACAGCATATACTGTAACAATCTTGAGCTGGAGTGTTGTAGAGTATGGTCCAAAATATGAAGATATTAACGAGCTTGACCATGTCAGAGACATAATTAAATGGGGCACTGAATATTTGCTCAAAGCTTTTGTTCCTCCAACCGAAACTAATCCGGATCAAGCCGTACTATATTCTCAGGTGGGAAGTGGTAGAAATGATACGAAGGTTGCTAACGATTATAACTGCTGGCAAAGACCAGAAGATATTAAGTATGAGAGGCCCGTCTCGAAATGCGGTACAAGAGCCTCCGATCTAGCAGGGGAGATAGTGGCGGCATTATCAGCAGCATCTATAGTATTCAAAGACAATATCAGTTACTCACAAGAACTAAGCAGTGTAGCAGAAAAGTTGTTTGAGCTCGCATTAATCAATGAAGACCCTACTAATCAAGAGACTTACACTAATGATCCTGAATGTGGAGGAGAAGCGACAAGGTTTTACAATTCGTCTGGTTACAAAGACGAAATGATATGGGCCGGAACTTGGTTGTTCTTTGCGACAGGGAATACTTCGTATCTTTCATTTGCCACTGAAAATGATAGATTTGAGTCAGCTTTAAGCGATGAAGAACATTTTGAGAAAGGGGTTTTTTATTGGAACAATAAGCTTACTGCCACAACGGTTCTTTTGACCCGTGTTCTATACTTTCACGATCTTGGCTATCCGTATGAATCCACATTAGGAGTATCGTTTAATATTACTAACACTCTCATGTGTTCTTATCTTTCTAGGCAGCACTTCAAAAGAACACCAGGGGGATTAATATTGCTAAGGCCGGATGAAGGGGCCCCACTCCAATATGCTGCTACTGCATCCTTTCTCAGTAAGTTGTACAGTGATTATCTCAATCTTCTGCAAATATCAGGTGGCCCCTGCACTGATACTCCATACTCAGTCGAAATGTTACGGAACTTCTCCATGTCTCAGGTAAATTACATATTAGGAGATAACCCGATGAAGATAAGCTATGTGGTCGGGTATGGGGCCAAGTACCCGACCCACGTGCACCATCGGGGTACATCGATCCCTTGGGACGGTAAAGAGTACTTGTGCGAAGATGGAGATAAATGGTTGAACTCTAAGGAACCAAATCCTAATCTTCTACTGGGAGCAATGGTTTCCGGACCAGATAAACTTGACAACTTTGTCGATGAAAGGGCACAGCCTTTGTTTACTGAGCCTACTATTGCAAGTAATGCTGGTTTAGTTGCTGCACTAATAGCATCACTTCATTCTAACTTTCGTACTAATTTAGGAATAGATAAGGTGGGTATTTTCTACAAACACCATTTAACATGA 1815 41.87 MLTQTSSETGHLLSLADRRPNSIEINFNLGPKSSTSYYDSLPSIYSKSYDFNMVIKDKAYFKRFLYISLTILVLILALLLLAHFLLRKHNHHHPSDNLRFAVNHALTFFDAQKSGHYPNNSPVKFRGDSGLKDGDSSNSEADLVGGFYDSGNNIKFTFTTAYTVTILSWSVVEYGPKYEDINELDHVRDIIKWGTEYLLKAFVPPTETNPDQAVLYSQVGSGRNDTKVANDYNCWQRPEDIKYERPVSKCGTRASDLAGEIVAALSAASIVFKDNISYSQELSSVAEKLFELALINEDPTNQETYTNDPECGGEATRFYNSSGYKDEMIWAGTWLFFATGNTSYLSFATENDRFESALSDEEHFEKGVFYWNNKLTATTVLLTRVLYFHDLGYPYESTLGVSFNITNTLMCSYLSRQHFKRTPGGLILLRPDEGAPLQYAATASFLSKLYSDYLNLLQISGGPCTDTPYSVEMLRNFSMSQVNYILGDNPMKISYVVGYGAKYPTHVHHRGTSIPWDGKEYLCEDGDKWLNSKEPNPNLLLGAMVSGPDKLDNFVDERAQPLFTEPTIASNAGLVAALIASLHSNFRTNLGIDKVGIFYKHHLT 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10180943 10183083 + Conep07aG0147700.1 Cone7ag1435 442031

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1435 604 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 484 510 IPR018221 -
Cone7ag1435 604 Gene3D - 94 590 IPR012341 GO:0005975(InterPro)
Cone7ag1435 604 Pfam Glycosyl hydrolase family 9 101 578 IPR001701 GO:0004553(InterPro)|GO:0005975(InterPro)
Cone7ag1435 604 SUPERFAMILY Six-hairpin glycosidases 96 582 IPR008928 GO:0005975(InterPro)
Cone7ag1435 604 PANTHER ENDO-1,4-BETA-GLUCANASE 82 584 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1435 K01179 - - cit:102630523 749.584
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0845 Cone-Chr1:54230873 Cone7ag1435 Cone-Chr7:10180943 2.64E-138 dispersed
Cone5ag0967 Cone-Chr5:4139706 Cone7ag1435 Cone-Chr7:10180943 1.16E-140 dispersed
Cone7ag1435 Cone-Chr7:10180943 Cone9ag0848 Cone-Chr9:4147230 3.37E-92 dispersed
Cone7ag1435 Cone-Chr7:10180943 Cone19ag0699 Cone-Chr19:5842499 1.04E-147 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1227 . Blo12g01107 . Bda03g00032 . . Bma04g00030 . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1435 . . . . . . . . . . . . . . . . . . . Car05g00700 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011121 1 0 1 1 0 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 31