Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1447 ATGGAGGGTGGTGACCGGAGTGCTTTAGAAAGCTCCAGTGAGACCGTGGAGGTGGGTGAAGCCCCTCGAGATCATGATGAAGAAGGTGGTGTTTTTGGTGGTGGTGTTGGTGCTGGCTCGAAATCCGGTGAAGAAGATAAGGGCGGAGGAGGTGATCAATATGAATATGAGGGTCATGACAAGACAAATTATGTTGGAAACCGCTGGCCTCGTCAAGAAACGTTGGCTTTATTGAAGATAAGGTCCGATATGGATGCTGTTTTCCGAGACTCTAGTCTTAAAGGTCCATTATGGGAAGAAGTTTCAAGGAAGCTAGCAGAACTTGGTTACAATCGAACTGCAAAGAAATGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAAAGAACAAAAGAAGGCAGAAATGGGAAACACGAAGGAAAAACGTATCGTTTTTTCGACCAATTAGCAGCTTTTGATCATCATCAAGATCATCATCAGAATCAGAATCAGCCTTCTCTTCCAATATCGTCAAAGCCTGCTGTGTTTTCACAAGATCTATCAATGGTAGTGAGACCTAACTGGACCAACCCTACTATCACCAGTACTGTTCCATCCAATTTACCCCCTACAAATAATAACAGTACATCACCAAACCATGAAATCCAAACGTTCATAAGCCCCACAATCCCTTCAAATCCTAAAGTACATATTAATTTTTCTCGTAGTAATAATAATAATAACAATAACAATAACATCCCTTCTTCCTTTGCAAACATGTCCACAAATCTTTTATCGAGTTCAACTTCTTCTTCAACCGCTTCGGATGAAGAACTTGGAGGCCGGAGAAAGAGAAAGCGGAAATGGAAGGATTTCTTTGTGAAACTGACAAAGGAGGTGATAGAGAAACAAGAGGATTTGCAAATTAAATTCTTAGAATCTTTAGAGAAAATAGAACACCAACGGATTGTTAGAGAAGACACTTTGAGAATGCAAGAGATGGCTAGAGTTAATTGGGAGCATGAAATTCTAATTCAAGAAAGGTCCAAAGCGGCTGCTAAGGATGCAGCTGTAATCGCATTTTTGCAAAAGATATCGAACCAACAATGCCCCCAACAACACAGTGGGGGTCTTGATCCACCGCTACCGTCGCCATTGCTGCCCCTGCCACCACCACCACTAGGACCATCACAGTCTCGACCTAGACAGCCGCCAGCTCTAAATCAAGTGGAGGTGAATTTGGACATCCATAAAATGGGGGTTAGTAATGGTGATCATAATGTGAGTTCTTCAAGATGGCCAAAAGCGGAAGTAGAAGCATTGATAAGGCTTAGGACGGAGCTAGACTTGAAGTATCAAGAAAATGGACCGAAAGGGCCTCTGTGGGAGGACATATCAGCCGCTATGAGAAAGGTGGGATACAATCGGAGCTCGAAGAGATGCAAAGAGAAATGGGAGAACATTAACAAGTACTTCAAGAAAGTGAAGGAAAGCAACAAGAAGAGGCCTGAGGATTCCAAGACTTGTCCATATTTTCATCAGTTGGATGCAATATACAAGGAGAAGATGGTCAATAAGAGTAGTACTGACAATATTTTGTGCTTCACTAACTATAATCAAATGCAGCAGCCATTAATGGTCCAGCCGGAGCAACAATGGCCACTTCCACAAGGAAAGCCATCAAACGGGGAAGAACAAAGTCGAGAGGAGGAAGAAGAAGATGATGATGATGATGATGATGATGATGATGATGATATTGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGATAGTGAGGAAGAAAATCATAAAGTCACTACCTTCGAAATTGTAGCAAACAAACAATCCTCAATGAGTGCTACAATGGAGTGA 1863 42.08 MEGGDRSALESSSETVEVGEAPRDHDEEGGVFGGGVGAGSKSGEEDKGGGGDQYEYEGHDKTNYVGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLAELGYNRTAKKCKEKFENVYKYHKRTKEGRNGKHEGKTYRFFDQLAAFDHHQDHHQNQNQPSLPISSKPAVFSQDLSMVVRPNWTNPTITSTVPSNLPPTNNNSTSPNHEIQTFISPTIPSNPKVHINFSRSNNNNNNNNNIPSSFANMSTNLLSSSTSSSTASDEELGGRRKRKRKWKDFFVKLTKEVIEKQEDLQIKFLESLEKIEHQRIVREDTLRMQEMARVNWEHEILIQERSKAAAKDAAVIAFLQKISNQQCPQQHSGGLDPPLPSPLLPLPPPPLGPSQSRPRQPPALNQVEVNLDIHKMGVSNGDHNVSSSRWPKAEVEALIRLRTELDLKYQENGPKGPLWEDISAAMRKVGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDAIYKEKMVNKSSTDNILCFTNYNQMQQPLMVQPEQQWPLPQGKPSNGEEQSREEEEEDDDDDDDDDDDDIEGEEEEEEEEEERDSEEENHKVTTFEIVANKQSSMSATME 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10247382 10250182 - Conep07aG0148900.1 Cone7ag1447 442043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1447 620 MobiDBLite consensus disorder prediction 234 276 - -
Cone7ag1447 620 FunFam Trihelix transcription factor GT-2 69 130 - -
Cone7ag1447 620 ProSiteProfiles Myb-like domain profile. 61 125 IPR001005 -
Cone7ag1447 620 Gene3D - 427 488 - -
Cone7ag1447 620 Gene3D - 69 130 - -
Cone7ag1447 620 ProSiteProfiles Myb-like domain profile. 419 483 IPR001005 -
Cone7ag1447 620 Pfam Myb/SANT-like DNA-binding domain 67 152 IPR044822 -
Cone7ag1447 620 Pfam Myb/SANT-like DNA-binding domain 425 512 IPR044822 -
Cone7ag1447 620 SMART sant 65 127 IPR001005 -
Cone7ag1447 620 SMART sant 423 485 IPR001005 -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 1 66 - -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 605 620 - -
Cone7ag1447 620 Coils Coil 580 600 - -
Cone7ag1447 620 CDD GT1 425 490 - -
Cone7ag1447 620 CDD GT1 67 132 - -
Cone7ag1447 620 PANTHER FI21293P1 55 566 - -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 561 595 - -
Cone7ag1447 620 FunFam Trihelix transcription factor GT-2 427 488 - -
Cone7ag1447 620 SUPERFAMILY Homeodomain-like 423 485 IPR009057 -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 375 394 - -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 45 66 - -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 234 270 - -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 546 620 - -
Cone7ag1447 620 SUPERFAMILY ARM repeat 475 598 IPR016024 -
Cone7ag1447 620 MobiDBLite consensus disorder prediction 364 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1501 Cone-Chr4:11681355 Cone7ag1447 Cone-Chr7:10247382 9.63E-296 dispersed
Cone7ag1447 Cone-Chr7:10247382 Cone8ag0052 Cone-Chr8:272598 2.20E-116 dispersed
Cone7ag1446 Cone-Chr7:10239024 Cone7ag1447 Cone-Chr7:10247382 2.78E-116 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46563 PF06728 PIG-U 1.70E-95 CL0111 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1447 - - - 0.0