Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1449 ATGGAGCTAGAATTAGGACTCAAGGTCACCCGGACCAGAGACGATCTTACCACCACTTCTGACTTCCGGTTCACCAAAGACCGAGCCTGCCCTCTTTTCATGTCAGAGGACACTGATATCTTCTTCATCCTTACAGCTAATCTTAAAGGTTGTAAAAGAGAGAACTTAAACATAACGATCAACAAGGATGGTACCCAGCTCACGATTAGCTTGGAATACCCAGTTGAGGAAATGGTGATGGTTGGATGGGTTATGCAGAAGAAAAAGGTGGTGCTTAGAGGGTTCAAAAAGATTTTCCGAATTCCGGAAGGTGTAGTTTTGGATCGGATCAAAGCAAAGTTTGATGAACAAGAATCGATTTTGACCATTCTCATTCCAAAATTGGTAAAAGGGATTGGAGGGGTTGGAATCGAGGAAATGAAGGAAGGGAATATTGAGAAAGAAGATATCGCAGAAAATCAGAAGATGAAAAGAATGGACGATGAAGCTGGAAGAGAAGAAGAAGACAATCCTGAAGAAGGAAGCACAGTCGATGAAGTTAGAACAAACGTGGAACAAGGCAAAGAGATTGTGGAAGATGGGAAGACACAAAAAAGTAAAGAAATTTCAGAAACATGTGATGACACTATAGAAAGAGAATCTGATGAGAAAGAAAATGAGTACGAGTCTTGTGAATTGAAGAGCAAGGAGGAAGCCAAGAAGGAGAGAGAGGAAGAAGAAAAGAAGATGGATTCAAAAGAGTCCAGGTTATGTGCTCCATTTGTTGTGGTGGGGTCAGCAATTCTTGCATCTCTTTATTGCAGTTGTTTTTCACTTTGTAAGAGCTAA 828 40.94 MELELGLKVTRTRDDLTTTSDFRFTKDRACPLFMSEDTDIFFILTANLKGCKRENLNITINKDGTQLTISLEYPVEEMVMVGWVMQKKKVVLRGFKKIFRIPEGVVLDRIKAKFDEQESILTILIPKLVKGIGGVGIEEMKEGNIEKEDIAENQKMKRMDDEAGREEEDNPEEGSTVDEVRTNVEQGKEIVEDGKTQKSKEISETCDDTIERESDEKENEYESCELKSKEEAKKEREEEEKKMDSKESRLCAPFVVVGSAILASLYCSCFSLCKS 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10257905 10258836 - Conep07aG0149100.1 Cone7ag1449 442045

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1449 275 Coils Coil 226 249 - -
Cone7ag1449 275 MobiDBLite consensus disorder prediction 175 247 - -
Cone7ag1449 275 MobiDBLite consensus disorder prediction 143 247 - -
Cone7ag1449 275 Gene3D - 8 132 IPR008978 -
Cone7ag1449 275 CDD ACD_sHsps-like 37 127 - -
Cone7ag1449 275 SUPERFAMILY HSP20-like chaperones 37 128 IPR008978 -
Cone7ag1449 275 PANTHER HEAT SHOCK PROTEIN 26 1 242 - -
Cone7ag1449 275 MobiDBLite consensus disorder prediction 143 164 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1449 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1500 Cone-Chr4:11673567 Cone7ag1449 Cone-Chr7:10257905 2.17E-127 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1372 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1500 Cone7ag1449 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cla09g00948 Cam09g0999 Cec09g1000 Cco09g1012 . . Cre09g0962 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008746 0 0 0 0 0 1 2 1 1 2 2 1 2 1 0 2 1 2 0 1 2 0 2 1 1 2 1 2 1 1 32