Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1483 ATGATCGATCAGTTAAGACAGACGGTCTCGATTCAAGGAGAGCCGCCACAGAGGATTGCTGCCTACATGGTGGAAGGTCTAGCTGCCAGGCTGGCAAGTTCTGGCAAGTCTCTTTACAAAGCCTTGAAATGCAAAGAGCCTCCTTCTGATGACAGGCTCGCTGCTATGCAGATACTCTTCGAGGTCTGCCCTTGTTTCAAATTTGGTTTCGTCGCCGCAAACGGAGCCATTCTAGGAGCTTTTAGAGATGAGAAGAGAGTTCATATTATAGATTTCGATATAAGCCAAGGTACTCAATACATAACACTGATTCAAACAATAGCAAATCAGGGAAATAAGTCCGTGCCTTATTTGAGACTGATCGGAATTGATGATCCGGAATCGGTCCAAAGGCCTGTAGAAGGACTTAAGAATATCGGGCAGAGGCTCGAAAAGCTGGCAGAAGAATTGCGGGTCCCATTTGAGTTCCGGGCAGTGGCTTCCAACACTTCTCCCTCTATGCTTGAATGCCGTCCGGGAGAAGCGCTTATAGTGAATTTTGCCTTTCAGCTTCACCATATGCCAAATGAAAGCGTTTCCACAGTGAATCTCAAAGACCAGCTTCTGAGAATGGTGAAGAGCTTGAACCCGAAACTAGTAACGGTTGTGGAGCAAGATGTGAATACTAACACGTCCCCATTTATTCCGAGGTTTATGGAGGCTTATAACTATTATTCGGCTGTATTCGAGTCGCTTGATGTGACTCTGCCAAGAGAGAGTCAGGATAGGATGAATGTGGAAAGGCAGTGTTTGGCGAGGGATATTGTGAATATTATTGCTTGTGAGGGAGAGGTGAGGATCGAACGGTATGAGGTTGCTGGGAAATGGAGGGCGAGGATGATGGTGGCAGGTTTCACGCCATGTCCAATGAGCTCGAGTGTATTGGATTCTATTAGGAAGCTTATAAGGGAGTATTGTGATAAGTATAAGGCGAAGGAAATAGGTGCTCTTCATTTTGGATGGGGGGGACAAAAGCTTGATTGTTGCTTCTGCATGGAGGTAACCGGCCAATGGGTGCTCTTCGATTTGGATGGTTTTGTATGA 1083 46.17 MIDQLRQTVSIQGEPPQRIAAYMVEGLAARLASSGKSLYKALKCKEPPSDDRLAAMQILFEVCPCFKFGFVAANGAILGAFRDEKRVHIIDFDISQGTQYITLIQTIANQGNKSVPYLRLIGIDDPESVQRPVEGLKNIGQRLEKLAEELRVPFEFRAVASNTSPSMLECRPGEALIVNFAFQLHHMPNESVSTVNLKDQLLRMVKSLNPKLVTVVEQDVNTNTSPFIPRFMEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNIIACEGEVRIERYEVAGKWRARMMVAGFTPCPMSSSVLDSIRKLIREYCDKYKAKEIGALHFGWGGQKLDCCFCMEVTGQWVLFDLDGFV 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10404947 10406483 - Conep07aG0152500.1 Cone7ag1483 442079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1483 360 ProSiteProfiles GRAS family profile. 1 346 IPR005202 -
Cone7ag1483 360 Pfam GRAS domain family 2 339 IPR005202 -
Cone7ag1483 360 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 339 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0094 Cone-Chr6:455288 Cone7ag1483 Cone-Chr7:10404947 3.59E-118 dispersed
Cone7ag1483 Cone-Chr7:10404947 Cone9ag0110 Cone-Chr9:478390 4.37E-118 dispersed
Cone4ag1449 Cone-Chr4:11499843 Cone7ag1483 Cone-Chr7:10404947 1.33E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46567 PF00154 RecA 1.40E-119 CL0023 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1483 K27748 - cit:102611655 542.732