Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1486 ATGTCTTCTAGGGATCTAGATTCCCTCTTCAGTGGCGGCGGTATCAGCTTTCTGACTGGGAGCCGGAATGGAAAGTTCAGCTATGGCTATTCCAGTTTCAAGGGTAAAAGATCTTCAATGGAGGATTACTTTGAGACAAAAGTTTCAGAGATTGATGGCCAGATGGTCGCCTTTTTTGGAGTTTTTGATGGTCATGGAGGCTCCAGAACAGCAGAATACCTCAAAAAAAACCTTTTCAAGAATTTAAGTAGCCATCCTGAGTTTATCACAGATACGAAGACAGCTATTGTGGAGGTGTTTAGAAAGACAGATGCTGATTACCTCGATGAAGAAAAAGGACAGCAAAAAGATGCTGGGTCAACTGCATCCACTGCTCTCTTAGTTGGGGACCGCCTCCTAGTCGCTAATGTTGGTGATTCCAGAGTCGTTGCCTCTCGAGGTGGTTCAGCTATTCCGCTATCAATTGATCATAAACCTGATAGGTCCGATGAACGGGAAAGGATTGAACAGGCTGGAGGTTTTATTATTTGGGCAGGAACGTGGCGTGTGGGAGGGATTCTTGCTGTTTCTCGGGCCTTTGGAGACAAGTTATTGAAGCCGTATGTGGTTGCAGAACCAGAGATTCAAGAGGAAGAAATTCATGGCGTAGATTTTATAATTATTGCTAGTGATGGGCTTTGGAATGTGATATCGAATAAGGATGCAGTAGGTTTAGTGCAAGATATACAAGATACGGAAGTTGCATCAAGAAAGCTAACAGAAGCAGCTTATTCGCGAGGGAGTTCCGACAACATTACATGTGTTGTTGTCCGATTCGATTTAGCCTGA 828 43.96 MSSRDLDSLFSGGGISFLTGSRNGKFSYGYSSFKGKRSSMEDYFETKVSEIDGQMVAFFGVFDGHGGSRTAEYLKKNLFKNLSSHPEFITDTKTAIVEVFRKTDADYLDEEKGQQKDAGSTASTALLVGDRLLVANVGDSRVVASRGGSAIPLSIDHKPDRSDERERIEQAGGFIIWAGTWRVGGILAVSRAFGDKLLKPYVVAEPEIQEEEIHGVDFIIIASDGLWNVISNKDAVGLVQDIQDTEVASRKLTEAAYSRGSSDNITCVVVRFDLA 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10425499 10427383 + Conep07aG0152900.1 Cone7ag1486 442082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1486 275 SMART PP2C_4 16 270 IPR001932 -
Cone7ag1486 275 Pfam Protein phosphatase 2C 28 265 IPR001932 -
Cone7ag1486 275 SUPERFAMILY PP2C-like 19 273 IPR036457 -
Cone7ag1486 275 ProSiteProfiles PPM-type phosphatase domain profile. 27 272 IPR001932 -
Cone7ag1486 275 ProSitePatterns PPM-type phosphatase domain signature. 58 66 IPR000222 GO:0043169(InterPro)
Cone7ag1486 275 FunFam probable protein phosphatase 2C 59 19 274 - -
Cone7ag1486 275 PANTHER PROTEIN PHOSPHATASE 27 270 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone7ag1486 275 CDD PP2Cc 26 272 IPR001932 -
Cone7ag1486 275 Gene3D - 22 274 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0964 Cone-Chr1:54855567 Cone7ag1486 Cone-Chr7:10425499 1.38E-114 dispersed
Cone4ag1725 Cone-Chr4:12767565 Cone7ag1486 Cone-Chr7:10425499 2.41E-125 dispersed
Cone7ag1486 Cone-Chr7:10425499 Cone7ag1645 Cone-Chr7:11098796 2.26E-125 dispersed
Cone4ag1446 Cone-Chr4:11479275 Cone7ag1486 Cone-Chr7:10425499 4.67E-190 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1486 K17506 - rcu:8270424 478.404