Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1497 ATGATGAAATACCTCCAACTGACCATGGCGATCTTGACAGTGGTGGTAAATATTTTACTTTTATCAGCAACAACGGAATTAGTGTCATCATCATTATCGTCCGATCCGCCTCCAATATCCCTTCCCAACTGCGCTGATCACTGTGGAAATCTCAAAATTCCATACCCAGTTGGCTTAGAGGAAAATTGCGCCTATAGTCGAGATTTCATCATCAAGTGCAACCAATCCAATGACCCTCCTGTAGCATCTATAGGCAAAGTTATTGTGACCAACATGTCCATCGAATCAGGCGAGCTGCACATCCTGCAGTACTCGGCACGAACTTGTACTAACCAGTCCGGTTATACAAATGGAAGCGTTAATAGCTTGCTCGGAGTCGGCTATCCGTTTAGCATCTCTAGCGAAAAAAACAAGTTGATTGCAACAGGTTGCAGCACTCTTGCCGGTGTTACTGGTTATAAAAACGATACACTATATGAGACAGGATGTTTTAGCCTTTGTGACAATACTACCTACTTAAAGATGAATGATTCGTCGTGTAATGGTGTAGGGTGTTGCCAGATGGAGATTCCAGATGGAATGACAAACGTTACGGTCGAAGTTACGAATTTGACCGATCGTATTGAAACCATGGAGTTCAATCCTTGTAGCTTTGCTACTCTTGCTAAGAAAGATTGGTTCCATTTCTCTACCGAGTATTATTACGAGTTTCCTGAGATGGTCCCTTTAGTGCTTGATTGGGGAATGGGGAACGAAACTTGTAAAGGTAAACCAAATTGTTTGTGTGGGGAAAATAGTGAGATGGTTGTTACCTCCAAGAATAAGTCTCAGTACCATTGCCAATGCTCGGAAGGGTTCGAAGGAAATCCATATCTTCATTGCCAAGACATCAATGAATGCGAGAGAAAAAGCTATGACTGCCCATCGCATAGTACATGTCTGAACATCCCAGGGAATTATACATGTACGTGCGACAAGGGGTATAAGAAAGATGGAGAAAATTGCATTCTTCACCAGCACATAACATTATATCCTATCTGGATTGGCGTTGGTGTACTTGTGTTGGTGATTTCAGCTTCATGGTCATACTTGGGTTACAGAAAGTGGAAGTTCATCAAACTTAAAGAAAAGTTCTTTAAGCAAAATGGAGGTGTCTTGCTACAACAAAAACTTTCCAATCATGGTGAATCTAATCGTATTTTGGCCAAGATATTCACTCAAGAAGAGCTCGAGAAAGCCACCGATAATTACGACGATAGTAAAATCGTCGGTACAGGAGGTTTCGGAACAGTTTACAAAGGAGTTTTAAAAGACAGTCTTGTAGTTGCAATCAAGAAGTCAAAGATAGTCGACAAAAATCAAATCGAGCAATTTGTCAACGAAGTCCTTCTTCTCTCCCAAATCAACCATAGAAACGTGGTTAGACTTTTAGGCTGTTGTTTAGAGACAGAAGTCCCACTCCTCGTTTATGAATTTGTTACTAACGGGACTCTCTTCGACCACATTCACAACAAAAGTAAATCTTTAAAACTTCCATGGGACACTCGTTTAAGAATAGCGGCAGAAATAGCCGGAGTATTATCATATCTTCATGATTCAGCTTCTACTCCCATAGTCCATAGAGATGTCAAGTCTGCAAATATACTCTTAGACGATTCTTACACGGCAAAAGTTTCAGATTTTGGCGCATCAAGATTAGTTCCGCTTGATCAAAAACAATTATCTACTATGGTTCAAGGAACGTTTGGATATTTAGATCCTGAATATTTTCAAACTAGTCAACTAACTGATAAGAGTGATGTTTATAGTTTTGGCGTTGTACTGACCGAGTTAATGACTGGGATAAAGGCAATATGCTTTGATAGGCCGGAAGATGAAAGGAATCTAGCAATGTATTTCCTTATTGCTTTGAAAGAGGACCGATTGGAGGAAATTGTGGAAGATTGTGTATTGAAGAGTGCAAGTATTGAGCATCTTAAGGAAGTTGCTCATCTTGCAAGGAGTTGCTTGATGGTTAGAGGGGAGGAAAGGCCTTCAATGAAGGATGTGGCAATGGAACTTGAGGGGCTGCGAATTTCGATAAATCATCCGTGGATTGTTCATGAGACATACTTGGAAGAGACAGAACAGTTGATTGATGAGAGATTCGATAGTAACAATATTAATAGTGTTGATATAAGTTACAATGGCATGACTGATCATGTACTATTTCCTGCACGAGATGGTAGATAA 2232 40.28 MMKYLQLTMAILTVVVNILLLSATTELVSSSLSSDPPPISLPNCADHCGNLKIPYPVGLEENCAYSRDFIIKCNQSNDPPVASIGKVIVTNMSIESGELHILQYSARTCTNQSGYTNGSVNSLLGVGYPFSISSEKNKLIATGCSTLAGVTGYKNDTLYETGCFSLCDNTTYLKMNDSSCNGVGCCQMEIPDGMTNVTVEVTNLTDRIETMEFNPCSFATLAKKDWFHFSTEYYYEFPEMVPLVLDWGMGNETCKGKPNCLCGENSEMVVTSKNKSQYHCQCSEGFEGNPYLHCQDINECERKSYDCPSHSTCLNIPGNYTCTCDKGYKKDGENCILHQHITLYPIWIGVGVLVLVISASWSYLGYRKWKFIKLKEKFFKQNGGVLLQQKLSNHGESNRILAKIFTQEELEKATDNYDDSKIVGTGGFGTVYKGVLKDSLVVAIKKSKIVDKNQIEQFVNEVLLLSQINHRNVVRLLGCCLETEVPLLVYEFVTNGTLFDHIHNKSKSLKLPWDTRLRIAAEIAGVLSYLHDSASTPIVHRDVKSANILLDDSYTAKVSDFGASRLVPLDQKQLSTMVQGTFGYLDPEYFQTSQLTDKSDVYSFGVVLTELMTGIKAICFDRPEDERNLAMYFLIALKEDRLEEIVEDCVLKSASIEHLKEVAHLARSCLMVRGEERPSMKDVAMELEGLRISINHPWIVHETYLEETEQLIDERFDSNNINSVDISYNGMTDHVLFPARDGR 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10467632 10470207 - Conep07aG0154000.1 Cone7ag1497 442093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1497 743 FunFam Wall-associated receptor kinase 2 493 710 - -
Cone7ag1497 743 SUPERFAMILY Protein kinase-like (PK-like) 400 688 IPR011009 -
Cone7ag1497 743 Pfam Wall-associated receptor kinase galacturonan-binding 44 101 IPR025287 GO:0030247(InterPro)
Cone7ag1497 743 Pfam Calcium-binding EGF domain 296 335 IPR049883 -
Cone7ag1497 743 ProSiteProfiles EGF-like domain profile. 296 336 IPR000742 -
Cone7ag1497 743 Gene3D Transferase(Phosphotransferase) domain 1 493 701 - -
Cone7ag1497 743 CDD EGF_CA 296 336 - -
Cone7ag1497 743 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 41 702 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Cone7ag1497 743 FunFam Wall-associated receptor kinase 2 386 492 - -
Cone7ag1497 743 ProSitePatterns Calcium-binding EGF-like domain signature. 296 322 IPR018097 GO:0005509(InterPro)
Cone7ag1497 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1497 743 Pfam Protein tyrosine and serine/threonine kinase 421 687 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone7ag1497 743 Gene3D Phosphorylase Kinase; domain 1 384 492 - -
Cone7ag1497 743 SMART egfca_6 296 336 IPR001881 GO:0005509(InterPro)
Cone7ag1497 743 SMART serkin_6 417 699 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1497 743 CDD STKc_IRAK 423 690 - -
Cone7ag1497 743 SUPERFAMILY EGF/Laminin 293 341 - -
Cone7ag1497 743 SMART egf_5 299 336 IPR000742 -
Cone7ag1497 743 SMART egf_5 253 295 IPR000742 -
Cone7ag1497 743 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524(InterPro)
Cone7ag1497 743 Gene3D Plasmodium vivax P25 domain 243 343 - -
Cone7ag1497 743 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Cone7ag1497 743 FunFam Fibrillin 2 291 336 - -
Cone7ag1497 743 ProSitePatterns EGF-like domain signature 2. 322 335 IPR000742 -
Cone7ag1497 743 ProSiteProfiles Protein kinase domain profile. 417 699 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1385 Cone-Chr10:10803785 Cone7ag1497 Cone-Chr7:10467632 3.42E-126 dispersed
Cone11ag1152 Cone-Chr11:8836063 Cone7ag1497 Cone-Chr7:10467632 1.97E-88 dispersed
Cone12ag0207 Cone-Chr12:1056549 Cone7ag1497 Cone-Chr7:10467632 6.87E-71 dispersed
Cone12ag0208 Cone-Chr12:1057438 Cone7ag1497 Cone-Chr7:10467632 2.57E-79 dispersed
Cone3ag0366 Cone-Chr3:1855957 Cone7ag1497 Cone-Chr7:10467632 4.15E-88 dispersed
Cone4ag1440 Cone-Chr4:11435233 Cone7ag1497 Cone-Chr7:10467632 0 dispersed
Cone7ag1497 Cone-Chr7:10467632 Cone9ag1279 Cone-Chr9:9578313 2.12E-80 dispersed
Cone7ag1495 Cone-Chr7:10463230 Cone7ag1497 Cone-Chr7:10467632 7.39E-158 proximal
Cone7ag1496 Cone-Chr7:10464340 Cone7ag1497 Cone-Chr7:10467632 1.03E-98 tandem
Cone7ag1497 Cone-Chr7:10467632 Cone7ag1498 Cone-Chr7:10473344 2.67E-209 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83066 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1497 - - - 0.0