Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1498 ATGTCTCTATACACAAAGCTTCATCTGATCATCACCTTGCAATTTATGATATCAGCTGCAACAATGGTACTATTGATTGCAGGTGATACTTCGAATTACACCATCGATCCGACCTGTCCCTCCAAGTGCGGAAACGTAACCATCCTTTATCCCTTTGGCACAACTGAAAAATGTTCTCAAAACGAGTACTTCTTCATAACATGCAATGAAACATACGACCCTCCGAAACCTTTCCTATGGAGTTCCAACATAGAAATCCTCGAAATATATTTAGACGGCCATTTACGCATAAACAACTTTGTCGCACGTGACTGTTATGACGAAAACTCCGTTCCGATCCCACCCCAAAGCCCTTATGCCAATTTACCAGTCTTCCCTTTCTCGGTCCGACGCAACAAGTTCATTGGAATCGGGTGCGACACATTTGCGGTCATACATGGCACCAACGGACAAAAATTTGCGACGGGATGTTTGTCTTTGTGTAGTAATTACAATGAGAGCATACTGGACGGGTCTTGTTCGGGGATTGGTTGTTGTAAGGCTCAAATTCCTAGAATGTTGTTGAGTTATAATGTGAGTACTCATAGCTACCAAAATCATAAACAAGTTTGGGAGTTCAATCCATGCGGATTTGCGTTTGTGATTGAAGAAGAATCGTTTAAGTTTTCGGCAAATGATCTCAAGGATTTTGGAAACAGGAGTTCTGTTCCAGCTATCTTGAATTGGTATGTTCCAGCTGATGTAGATAAGGAGAGTGATGTTTGTGAAGAAGCTGTTAAGAATGAGACTACTTTTGCTTGTAAGCAAAATAGCAATTGTTTTGTGTCCGGTAATGGTCCGGGATATCGTTGCACTTGCAAGGCTGGTTATACAGGGAATCCATACATCCCCAATGGCTGCATAGACATTAATGAGTGTGAAGATCCAAAGCTCAACGTTTGTGTACAAACATGTACAAATATACCGGGAAATTATACTTGTTCTTGTAACAAGGGCTACAATGGGAGTGGAAGAAAAGATATTGGAGATGGGTGTGTTCCGAATCAAGGAAGACAACCGACAATTCATGTTGTCGTTGGTAAGTACATGAATTATATAGGTATTGGAATGGGGCTAGTGGTAATGATAACAGCTTGTGGTTGGTTCTCTGTGGGATTTAAGCAAAGAAAGCTCATCAAACGCAACGTAAGTTTCAAATTAGCCAGAGAGCTATCATCCCGAGAAGGAGGTCCCAAACTTTTTACGGCAGAAGAGCTTATCAAGGCGACGGACAGCTTCAACGAAAGCAGAATCATAGGCCGAGGAGGACATGGCACTGTTTACAAAGGTATACTTCCACACAACCAAGTTGTAGCCATAAAAAAGTCCAAGGTTGTAGAGAAAAGCCAGATAGAGCAATTTATCAATGAAGTCACGGTTCTCTCACAAATCAACCATAGAAATGTTGTAAAACTCTTAGGCTGTTGCTTAGACACAGAAGTGCCGCTATTAGTCTATGAATTTGTCACAAATGGGACCCTCTATGACCACATTCATGGAGAGAATAAGGACTCTCTCTCCTCCACCTTTTTCTCCTGGGAAATCCGCGTTAGAATAGCAGCCGAAACAGCGGGAGTTCTCTCTTATCTACACTCCTCCGCTTCAATTCCTATCATCCATAGAGATGTCAAGTCCCATAACATTCTTCTAGATGAATCTTACACTGCTAAAGTGTCAGATTTTGGAGCTTCTAGGCTTGTCCCTCTAGACGAAACTCAACTATCAACAATAGTGCAGGGAACACTTGGGTACTTGGACCCTGAGTATCTACAGACCAGTCAGCTAACTGAGAAAAGTGATGTTTATAGCTTTGGAGTTGTGCTTGTAGAGCTTCTGACCGGGAAGAAAGCGCTTGCATTTGACGGGCCGGAAGAAGAGAGAAACTTGGCTCGGTATTTTCTTATGGCGATGAAAGAGGATCGGTTGCTCGAAATTATTGAGAGTGAGATAGTGAATGATGGGGCTATTGAGCAGATTAAGGAAGCAGCATATCTTGCAAAGAGGTGCTTGAAAGTGAATGGGGAGAAGAGACCTACAATGAAAGAGGTGGCCATGGAACTAGAGGGCTTGCTTGTGATGGCAAAGTTTCCATGGGAAACTACTGCTGCTGAATTGAAGGCGAAGGATATGGAGTCCCTTGGCGTACTTTTATCAACTTCCGGACACTCCGGTATTTGGAAGTGA 2223 42.69 MSLYTKLHLIITLQFMISAATMVLLIAGDTSNYTIDPTCPSKCGNVTILYPFGTTEKCSQNEYFFITCNETYDPPKPFLWSSNIEILEIYLDGHLRINNFVARDCYDENSVPIPPQSPYANLPVFPFSVRRNKFIGIGCDTFAVIHGTNGQKFATGCLSLCSNYNESILDGSCSGIGCCKAQIPRMLLSYNVSTHSYQNHKQVWEFNPCGFAFVIEEESFKFSANDLKDFGNRSSVPAILNWYVPADVDKESDVCEEAVKNETTFACKQNSNCFVSGNGPGYRCTCKAGYTGNPYIPNGCIDINECEDPKLNVCVQTCTNIPGNYTCSCNKGYNGSGRKDIGDGCVPNQGRQPTIHVVVGKYMNYIGIGMGLVVMITACGWFSVGFKQRKLIKRNVSFKLARELSSREGGPKLFTAEELIKATDSFNESRIIGRGGHGTVYKGILPHNQVVAIKKSKVVEKSQIEQFINEVTVLSQINHRNVVKLLGCCLDTEVPLLVYEFVTNGTLYDHIHGENKDSLSSTFFSWEIRVRIAAETAGVLSYLHSSASIPIIHRDVKSHNILLDESYTAKVSDFGASRLVPLDETQLSTIVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLVELLTGKKALAFDGPEEERNLARYFLMAMKEDRLLEIIESEIVNDGAIEQIKEAAYLAKRCLKVNGEKRPTMKEVAMELEGLLVMAKFPWETTAAELKAKDMESLGVLLSTSGHSGIWK 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10473344 10475743 - Conep07aG0154100.1 Cone7ag1498 442094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1498 740 FunFam Wall-associated receptor kinase 2 502 723 - -
Cone7ag1498 740 Pfam Wall-associated receptor kinase galacturonan-binding 39 97 IPR025287 GO:0030247(InterPro)
Cone7ag1498 740 FunFam Fibrillin 2 301 340 - -
Cone7ag1498 740 SUPERFAMILY EGF/Laminin 301 337 - -
Cone7ag1498 740 SMART egf_5 305 346 IPR000742 -
Cone7ag1498 740 SMART egf_5 254 301 IPR000742 -
Cone7ag1498 740 FunFam Wall-associated receptor kinase 2 253 300 - -
Cone7ag1498 740 CDD EGF_CA 302 335 - -
Cone7ag1498 740 ProSiteProfiles Protein kinase domain profile. 426 704 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1498 740 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 36 704 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Cone7ag1498 740 CDD STKc_IRAK 432 703 - -
Cone7ag1498 740 FunFam Wall-associated receptor kinase 2 399 501 - -
Cone7ag1498 740 Gene3D Laminin 252 304 - -
Cone7ag1498 740 Gene3D Transferase(Phosphotransferase) domain 1 502 717 - -
Cone7ag1498 740 SUPERFAMILY Protein kinase-like (PK-like) 408 700 IPR011009 -
Cone7ag1498 740 ProSiteProfiles EGF-like domain profile. 302 336 IPR000742 -
Cone7ag1498 740 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524(InterPro)
Cone7ag1498 740 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 318 329 IPR000152 -
Cone7ag1498 740 Pfam Protein kinase domain 427 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1498 740 ProSiteProfiles EGF-like domain profile. 251 293 IPR000742 -
Cone7ag1498 740 SMART serkin_6 426 704 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone7ag1498 740 Gene3D Laminin 305 340 - -
Cone7ag1498 740 ProSitePatterns Calcium-binding EGF-like domain signature. 302 327 IPR018097 GO:0005509(InterPro)
Cone7ag1498 740 Gene3D Phosphorylase Kinase; domain 1 387 501 - -
Cone7ag1498 740 SMART egfca_6 302 346 IPR001881 GO:0005509(InterPro)
Cone7ag1498 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1388 Cone-Chr10:10819454 Cone7ag1498 Cone-Chr7:10473344 2.91E-140 dispersed
Cone3ag1335 Cone-Chr3:32314200 Cone7ag1498 Cone-Chr7:10473344 5.92E-98 dispersed
Cone4ag1439 Cone-Chr4:11433436 Cone7ag1498 Cone-Chr7:10473344 1.75E-47 dispersed
Cone7ag1495 Cone-Chr7:10463230 Cone7ag1498 Cone-Chr7:10473344 3.34E-144 dispersed
Cone7ag1496 Cone-Chr7:10464340 Cone7ag1498 Cone-Chr7:10473344 3.81E-76 dispersed
Cone7ag1498 Cone-Chr7:10473344 Cone9ag1279 Cone-Chr9:9578313 2.42E-71 dispersed
Cone7ag1497 Cone-Chr7:10467632 Cone7ag1498 Cone-Chr7:10473344 2.67E-209 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83067 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1498 - - - 0.0