Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1500 ATGGATATGCCTCACTTCCTTCACCAGCAATCTTCCAGGTACGCTACTCCTTCTCTTCATCATATCCCCGAGGATTCGAACTCTTACGCCCACCGCATTCCTCCACCGCTGCCGCCTCCAACACTACATCCTTCCGATCCTAACCAGCCTCAATTCACTACCTCCGCTCTTGATTACAATAGCTGCTTTATGATTGAGGGTGATCACCGTAGCTCCTTGTTTTCCGTAAGGGATTTCGTTCATTCCGATCGAATTTCTTTTGATGAAGATCGTCTTCATCGTTCTTTACCTAAATCCGACCGATCTTTCCTCGAAAACCGGCCAGACTATCGGGAACTATCTAGAGTGCCGGTGGATAATAGGCCGGTTAGGAAGTATTCGCATAATGACTTTGAACTTGAGGGGTATCACCGTCAATTTGATGACAGACCTATTTCGCAACACTGGTCGATAGATAGGCATGCATTGGAAGATAATTCTAGGCTTAGGGTAGAATATGATGAGTCGTTTCCACTGAATCAGAGAGAAGATAGGGTTTGGGCTCGAGGAGAGGATAATTATGATCGCCGTGATCACCTTGGATCGAATCCTAGTTCATATCGTCCTGACTTCGAAATCCTTACTGATCAGAATCAATTTTCAAGAGATATTAGATTGAGTCCAACTTTTGATCCTCGCCAAAATGGTTTGTCATTTAGAAAAGAGTCATTCAGTAGTGGGAAGAGAGATGGGATGTCTGAAAGTCAGAGATGGGGTCAACATAATAGACAATACTCTACAGAGGTACGGCATTCATTGTTTGAGATGGCAAGTAATGAGAGACGGGATAATGATTGCAATGATTCTCAAATTTTATCTGGGAAGCGTGAATCCTATAGTTCAGAATTGGGTAGATATGGTAGAGATTCTAAAGAAAGCAGTCATGAGTATAATCGAACTCTGAGGAAGCAAGTTCAAAAGAAGAGCGCCCTTCTTAGAATTCAAATGCCAAAGCCGAATTCCAAGGCCAGAGAGACTTCTGATTACTTCGACAACAAAAACTCTGGATCTTTTAGAGGTGAAGATCATCTCAGTAGAAGGTCTGAAGAAAATAATGAGCTAGAGGGAGATCCTGTTGAGCTTGATGTCTCTTTTAAATCTAATTCCTTGGTAGCCAAGGCAATTATGGCGCCTTTGAGTTCAGGTCCTGTTTTGGGTGCAAATCTGACTCCTAAGAATGAGAAAAGTAAGGAACTATTGGTGCCCAAACAGGCTTCTTCAGATTCACCGTTACCCAAACTAAACAAGGATATTACCAATAGGTATGGCTCAACACAGACTGTGAATTCTTCACCCAACTCTGTGAATAAATCAAAAAAATCAGAAGAGAAGAAAGTTGCCGATTCTGATGTTGACAATAAGCCTAGTGGCCCTTCACAATCTTCTTCCAAAGGAAAGGACGTTACTCTTGGAAAGAGTAAAGTGGAATTGGCTCCAAATGATATGGTGTTACAAAAAGAAGGTACTGATGTTACTCCTGGTAAAACAGCTCAACCTTCACAGCCTTCTTCCAAGAGAAAGAATGTTACTCTTTTAAAGAGTAAAGTGGAAAGGGCTCCAAATGATATGGTGTTACGAAAACAAGGTACTGCTGTTTTTCCTGGTAAAACATCTCAACCTACATTGGTGAGGAAGAAAAAAATCGTGAGAAAAGTAGTGAGGAAGGTTGTAAATCATCAGGTGCGTTCATCAAGCTCACAGCCAACAAAAAGTCACAATGAAACCCCTGTTGACTCGAAGACTTGTATAGAGGAAGGGAATGTGTTACCTGTTAATGAAACAGTGGATGTACCTATACTGGCGATGGAATCACGAGAATATGGGTTTACTATTGTTTCAGATCGGGAGTGTTTATCTGAGACTAAGATAAATGAAAGAAGCTCAGGTTCTCCATTACGTTTAGTGCATAAGGAGGAATCCAGAACTGATGAGCTTAATGCAAGTGTAGACAGTTCAAATGATTGTTTGAATTCTGCTATAACTTGTAACAGGGATAAAATTGAAATACCAGACAACCAACATGTTTTTGACATGGATAGTGTGGAATGTGGCAGGAATCTGTACAGTCAGAAAGGAGATGCATTGTTGCTTGGCAATGCCTCAGGAAAGAAAAATCAAGATACCGTATGTGCTATAGGAGATAATCCTCTCTCTCGCTTGTTGTGTTCTGGAATCAACACCGATAGTCGTCTTGTAGATAGAGGGGCTTTTGCTGGTGATGTGAATATAGATGTGAGTTCTGGCGATGGGTTAATCAAGTCACAACAGAACAGTGCAGATTGTAATATTGGTGGTATTATCGAGCAGATTTTCACAAATCAGGTGTCTGTACCACCAAATAATGAAAATTTGGAAGGAGTATCAGCAGCTGATTTTTCATTAGGAAATGATGCTGTGGTTGGTTTGTCAGATTCAAAAGAAACCAGAGTGCAGAACTCCATATGTGCAGACTGTTCTGATTGTATGCAGTGTACTGACTGTGGCTCTGAAAATACTGATTGCAATTTTTCAGCCAAGCATATAATTTCTGACCATGTAAACATTGAACCTATTGGAGAACAGCCATGTGCAAATGGGATCACTGTGTCACTTGTGAATGGCTCCAAAGAAGGATCTCCCAAGGCTACAGCATCAGCCAAGAGTAGCCAAGGAGATATGTCAATGAAAAGGAGTGATGTTAAAACTCATTTGGATGAAAAATATGTAGAGCCTGTAAATGCTGTGGATACAGCCTTAAGTCTAATTCTAAAGGACTCTAATTCTGAAGAAGTTGAAGTCTCCGATGTCGGATATGGGAAGGGTTTATCAGATGAGTTGTACAAGTCCAAGTATGTGGTCGGTTTTGATTGTAATAGCTACCTGAATGAAATATCGCCTGAGCGTAACAAGAAAAGAAAAGTGATTATTTCTAGCCGGAACTTTCCATGTGCTGGTGCTAATAGTATTGAGGGATCGGAAAGCTCTTCTGCATCTGGTCCACAAGGTTCCTTAACTTCTAAGCTTAAACTTACACAACAGGAGGAGGTTGTAACAAGTAAGAACAATCTTCTGCTTGAGCTTACTATGATTCCTCTTTCAGAGAGGGTCGGTTTGTTGATTGACAATAATAGTACACATACAGAAGCTTCTGGGAATCTGGATGCTGTACAGAATCATCAGAATCCTGATGCTAATTCATGTTCAACCTTTCTGAAGTCAATATTTCCAAATTTTCTGCCCCTTCATCCATCAACATCTGGAAATGGACCAAAAGAAAATGCTAGTACAACAATAGCCACAAATGAAATAGACAATATGGATGTGGACAGTAGTAGAGAGGAAAAAATGGAGGCTCAACCTTTGGAAGATCAATTTATGATTCTTGATGAGTCTGCTCAGAGGGGGATACCTTCCGAAGTTTTGTCTCCAGGATTAGAGCAGGGTTCTCCAACTACTGACCAGGATTCTGACCATCACCTTAGGCAAGGTAAATTTTATTGTGTGCCAAATCTCTTGGCATTATCTCCCATTGACAGTGGCTTTTACGCCACTAACTCCAGCGTTGAAGTCGTAGGGCGTGCGCACGATAAGCTGTCAGATACAGATTCTCCCGGAACTACTGATGTTCTAGAAGTAAACATGTTAAATGGAAAAGTAGATGGTACATCTATGGTTGAAAGTGAATCTAAGATGTCTGATCCTACTTCAGTATCACAATCTACCAACACCAATCTAAATTTAGGTGATGCAACCAAAGGGGACTCCACATTTGCTGGGGTAATAGTGCCATTGCCATCAAAAGAATCCAAAAGAACATTTCAAGATCCGAATCTATTTTCCGAAGCAGATAAGAAAATACAGCTGCATCATACAACTACCAAGACTTTTCCAGGTCAGTTGTCGTCTACTTATACTTCAAAAAAACTGGCCCCTTCTATCCATAGTGCAAAGTCCCGAACTTGGCATAGAACTGGTAATAGTCTTGTTAGAAAATCAGCTCCAGTTGCTCCTCTACTGCTGGGTTCTCATGCTCAGAATTCGTCTATTTGTCAGTCAAACACTGTGGGTCTAGATGAAGGGAAGAATATTGAGAAGTCTGGAAGTCAGGTTGATGTTGTCGATAATCCAAATGATTGTAATGCAGGAGGAATGGATACACCTGTTGATAGGCCTAGAACACCTCCACTACCTTGGGATTGTACAATGTCTCCTCTGGTGGAGCCTCTTCTAAGTGATTACTGTGGGAATGCATCAGATGTTTTGAAATCTACAGAAACTAACGATCAATCAAGGTCTGCTGAGAACTCACTGAAGATTTCTGAAACTCCTGATAATAAGATTGTTCCTGCTAACAAAACAGTCAATCTGAGTGAATTAAATTATTGTTATTTTGATTCTTCTAATAGGGAGCAAATAGTATATGTAAAACGTAAATCAAATCAGTTAATAGCAACTTCCAATCCTCGTGATCTGTCTATCCACAAATCAGATAAGTCTCAGCCCATGTCATCTGAAGGATACTACAAGAGGAACAGAAATCAGCTAATTAGGGGTTCTTTGGGAGGTAATTTGAAGCATAAGCTGCTCTCTGCTGATGATGTGCATAGGGTTTCCAAGGATGTTTCTGGAAGACGTTCTACTAAGAGGCGTCTACGTAAAGGGATCGCAAAGACATACAAATCTTCAAGGTACTCTCTGGTGTGGACTTTAAGTGGTTCAAAGTCACCAATAAATGATAAAGGCAGTCAGCAGCACAAGAAGATTGTTCCTCATCTTTTTCCATGGAAAAGAGCATATTGGAGAAGTTTCATTAATAATACACCTTCAGTTCTTTCTAGTAATAGTCCCTTATCTACAATCAGTAAAAAGTTGCTACTCTTGAGAAAGAGGGATACACTCTACACAAGATCAAAGAATGGATTTTCACTTCGGAAGTCCAAGGTATTAAGTGTTGGTGGATCTAGTTTAAAATGGTCAAAATCCATCGAAAAGTGTTCAAAGGAAGCAAATGAGGAAGCTACACGTGCTGTTGCTGCTGTGGAGAGAAGGAAAAGGGAACAGAATGGGGCTCCTTCCGTTTGTATTAGGACTGAGGGAGAACGCATATTTCGCATTGGTTCATTCTCCTACAAAATGGATCCATCAAAACGGACACTTCAGAGGATTTCAGATGATGATTCATCCTGCTCAACTGCTCCTAAATCAGAAAAGAGTTCCAAGAAATCTTATGTTCCTAGGAGATTAATGATTGGAAATGATGAGTACGTTAGGATTGGCAATGGTAACCAGCTTGTTAGAAATCCGAAGAAAAGAGCTCGAATGTTGGCAAGTGAGAAAGTTAGATGGAGTTTGCACACTGCCAGACAGCGATTGGCAAGAAAGCACAAGTATTGTCAGTTCTTCGCAAGATTTGGAAAATGCAACAAAGATGATGGGAAGTGCCCCTATATTCACGATCCTTCCAAAATTGCAGTATGCACAAATTTTTTGAATGGCTTATGTTCTGATTCCAACTGTAAATTGACTCATAAGGTCATCCAAGAAAGAATGCCAGATTGTTCTTACTATCTACAAGGTTTATGCACAAATAGAGATTGTGCTTATCGACATGTAAATGTGAATCCAAAGGCCTCTACATGTGAAGGATTTCTCAAGGGATACTGTGCGGATGGCAATGAATGCCGTAAAAAGCACAGTTATGTTTGTCCTATTTTGGAAGCAACAGGGACTTGTCCACAGGGCTTCAAATGCAAACTTCACCACCCAAAGAAACAAGGCAAGGGAAAGAAAAGGAAGAGATCAGTAGGACAGCAGAAGAAGAATGCACGAGGACGCTACTTTGGCCCCATGCAAATCGACGTTCCTGACCCTGCAACTTCAGTGCCGGAAAAGCATTCAGCTCAAAACAACAATCTTCTCCTTCGGGAAGAATTAGCAGATTTTATCAGTCTTGGTGTCAGTGATGAAGAGGTTGGAGAAATGGATGATAAGGTGAGCGAGCAGAAGTGGTTATGCGGCAGTGATGAATCGGATTTGGATTTAGATGATTTGGATGAGCTATCTAAGCCAGTCCTCATCATGAATGATAATTCTACTGCGCAATAA 6123 40.78 MDMPHFLHQQSSRYATPSLHHIPEDSNSYAHRIPPPLPPPTLHPSDPNQPQFTTSALDYNSCFMIEGDHRSSLFSVRDFVHSDRISFDEDRLHRSLPKSDRSFLENRPDYRELSRVPVDNRPVRKYSHNDFELEGYHRQFDDRPISQHWSIDRHALEDNSRLRVEYDESFPLNQREDRVWARGEDNYDRRDHLGSNPSSYRPDFEILTDQNQFSRDIRLSPTFDPRQNGLSFRKESFSSGKRDGMSESQRWGQHNRQYSTEVRHSLFEMASNERRDNDCNDSQILSGKRESYSSELGRYGRDSKESSHEYNRTLRKQVQKKSALLRIQMPKPNSKARETSDYFDNKNSGSFRGEDHLSRRSEENNELEGDPVELDVSFKSNSLVAKAIMAPLSSGPVLGANLTPKNEKSKELLVPKQASSDSPLPKLNKDITNRYGSTQTVNSSPNSVNKSKKSEEKKVADSDVDNKPSGPSQSSSKGKDVTLGKSKVELAPNDMVLQKEGTDVTPGKTAQPSQPSSKRKNVTLLKSKVERAPNDMVLRKQGTAVFPGKTSQPTLVRKKKIVRKVVRKVVNHQVRSSSSQPTKSHNETPVDSKTCIEEGNVLPVNETVDVPILAMESREYGFTIVSDRECLSETKINERSSGSPLRLVHKEESRTDELNASVDSSNDCLNSAITCNRDKIEIPDNQHVFDMDSVECGRNLYSQKGDALLLGNASGKKNQDTVCAIGDNPLSRLLCSGINTDSRLVDRGAFAGDVNIDVSSGDGLIKSQQNSADCNIGGIIEQIFTNQVSVPPNNENLEGVSAADFSLGNDAVVGLSDSKETRVQNSICADCSDCMQCTDCGSENTDCNFSAKHIISDHVNIEPIGEQPCANGITVSLVNGSKEGSPKATASAKSSQGDMSMKRSDVKTHLDEKYVEPVNAVDTALSLILKDSNSEEVEVSDVGYGKGLSDELYKSKYVVGFDCNSYLNEISPERNKKRKVIISSRNFPCAGANSIEGSESSSASGPQGSLTSKLKLTQQEEVVTSKNNLLLELTMIPLSERVGLLIDNNSTHTEASGNLDAVQNHQNPDANSCSTFLKSIFPNFLPLHPSTSGNGPKENASTTIATNEIDNMDVDSSREEKMEAQPLEDQFMILDESAQRGIPSEVLSPGLEQGSPTTDQDSDHHLRQGKFYCVPNLLALSPIDSGFYATNSSVEVVGRAHDKLSDTDSPGTTDVLEVNMLNGKVDGTSMVESESKMSDPTSVSQSTNTNLNLGDATKGDSTFAGVIVPLPSKESKRTFQDPNLFSEADKKIQLHHTTTKTFPGQLSSTYTSKKLAPSIHSAKSRTWHRTGNSLVRKSAPVAPLLLGSHAQNSSICQSNTVGLDEGKNIEKSGSQVDVVDNPNDCNAGGMDTPVDRPRTPPLPWDCTMSPLVEPLLSDYCGNASDVLKSTETNDQSRSAENSLKISETPDNKIVPANKTVNLSELNYCYFDSSNREQIVYVKRKSNQLIATSNPRDLSIHKSDKSQPMSSEGYYKRNRNQLIRGSLGGNLKHKLLSADDVHRVSKDVSGRRSTKRRLRKGIAKTYKSSRYSLVWTLSGSKSPINDKGSQQHKKIVPHLFPWKRAYWRSFINNTPSVLSSNSPLSTISKKLLLLRKRDTLYTRSKNGFSLRKSKVLSVGGSSLKWSKSIEKCSKEANEEATRAVAAVERRKREQNGAPSVCIRTEGERIFRIGSFSYKMDPSKRTLQRISDDDSSCSTAPKSEKSSKKSYVPRRLMIGNDEYVRIGNGNQLVRNPKKRARMLASEKVRWSLHTARQRLARKHKYCQFFARFGKCNKDDGKCPYIHDPSKIAVCTNFLNGLCSDSNCKLTHKVIQERMPDCSYYLQGLCTNRDCAYRHVNVNPKASTCEGFLKGYCADGNECRKKHSYVCPILEATGTCPQGFKCKLHHPKKQGKGKKRKRSVGQQKKNARGRYFGPMQIDVPDPATSVPEKHSAQNNNLLLREELADFISLGVSDEEVGEMDDKVSEQKWLCGSDESDLDLDDLDELSKPVLIMNDNSTAQ 2040
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10480308 10487829 - Conep07aG0154300.1 Cone7ag1500 442096

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 1 53 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 294 316 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 1234 1255 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 242 266 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 466 481 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 993 1012 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 571 589 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 9 23 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 337 367 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 881 899 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 1730 1744 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 220 373 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 415 449 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 267 283 - -
Cone7ag1500 2040 Coils Coil 1676 1696 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 450 464 - -
Cone7ag1500 2040 FunFam zinc finger CCCH domain-containing protein 3 1828 1879 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 1927 1945 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 394 520 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 1722 1749 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 881 902 - -
Cone7ag1500 2040 Gene3D - 1825 1879 - -
Cone7ag1500 2040 ProSiteProfiles Zinc finger C3H1-type profile. 1880 1907 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 1927 1948 - -
Cone7ag1500 2040 Gene3D - 1880 1942 - -
Cone7ag1500 2040 ProSiteProfiles Zinc finger C3H1-type profile. 1798 1827 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 PANTHER CCCH ZINGC FINGER 253 2037 - GO:0005634(PANTHER)
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 504 520 - -
Cone7ag1500 2040 ProSiteProfiles Zinc finger C3H1-type profile. 1853 1879 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 FunFam Zinc finger CCCH domain-containing protein 7 1881 1941 - -
Cone7ag1500 2040 SMART c3hfinal6 1853 1878 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 SMART c3hfinal6 1798 1826 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 SMART c3hfinal6 1907 1929 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 SMART c3hfinal6 1827 1851 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 SMART c3hfinal6 1880 1906 IPR000571 GO:0046872(InterPro)
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 32 46 - -
Cone7ag1500 2040 MobiDBLite consensus disorder prediction 571 591 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1500 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1435 Cone-Chr4:11406661 Cone7ag1500 Cone-Chr7:10480308 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g208 . . . . . . . . . . Cma01g01036 . Car01g00911 . . . . . . . . . . . . . . . . . . Cone4ag1435 Cone7ag1500 . . . . . . Blo17g00165 . . . . Bpe14g00400 . Bma02g00201 . Cmo01g01075 . . . . . . Cpe02g00855 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003643 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 0 2 2 1 2 3 12 1 45