Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1504 ATGTTTGTAACAATATGGACAGAGCTTTCTCAATTCCAAACGACTATTGAGTCACTGAACACATATCCGCCTCAAGAGTTACCCTGGCTTGGTCCTGTTCCTGGGGATATCGCTGAAGTTGAGGCATACTGTAGAATCTTTAGAGCTGCTGAACGGCTTCATGCTTCATTGATGGACACACTTTGCAATCCTTTAACTGGGGAATGCAATGTTTCATATGATTTTCCACAAGAGGATAAACCTCTTCTGGAGGATAAAATAGTCTCAGTTCTTGGTTGCATAGCTTCCCTGCTGAACAAAGGGAGGGAGGATGTTCTGACTGGAAGATCTTCCATTATGAATTCCTTTAGTGTTGTGGATGCAAGTGGAGACGAGGACAGGCTTCCTCCACTGACCATCTTCAGGAGGGAGATGAAAAGGTGTTGCGAGAGCTTGCATGTTGCCCTGGAAAGTTATTTGATGCCTGGTGATGATAGAGATTTGAATCCATGGAGAAAGCTGCAAAGACTGAAGAATGTTTGCTATGATTCTGGATATGCCCGAGCAGAGGATTATCCCTGCCATACTTTATTTGCAAACTGGAACCCCGTTTCTTTAAGTGATTCAAAAGTTGACATGTTGTCCAAGGATTCTGATGTAGCTTTCTGGGCCGGTGGTCAGGTAACAGAAGAAGGTCTGAAGTGGTTGGTAGAAAGAGGATTTAAAACGATTGTGGATCTTAGGGCTGAGTCTGTGAAGGATGAATTCTATAGAGCAGAGATTAAGGAAGCTATTGGTGCTGGGAAAGTAGAATTGGTCACAATTCCTGTTGATGTGGGAACTGCTCCTTCAATGGAGCAAGTTGAGAAATTTGCATCTTTGGTTTCCGATTCTAATAGAAAGCTAATCTATCTTCATAGTAAAGAAGGTGTGCGGAGAACTTCAGCGATGGTATCCAGATGGAAGCAGTACATGACACGCTGTGCTTCCCAGGTCATCATCAACCAGTCACTTACTCCCACTGGCATATCACAAAGCAACAACAATAATTTGCGACAATCCCACAAAAAGAGAGTGGAACAGCTGGTAGAATCTTCCATTTCAAAAGAGATGCCAACCCTAAGAAAGGAAAACAAGTCCTTGGTGGAGTCTCTTGATGCAATTTATAGCTCAGATGGATCTTGTGGAGACAGCTTGTTAGACGAGGATGGACGATATCTCAGCCTCAGTGGTGACCCTCATAGCATCGATTCCCCCCAAGGTCAGATCTCTGTAGAAATCACTGAAAATAAATCTGAGTCTCTATCCAGATTTTGCATGAAAAGTGACCCCCTGAAGGCTCAGGTTCCTCCTTGCAATTTTTTCTCCAAAGAAGAAATGTCCAAGTTTTTCACGACTAAAAAGATAGCACCCCCCACTTACCGTAATTATCAACAGAAACAATTGAAAAAATTTCTAGTGTCAAGAGATACTTCTATTAAGAAGATGCGAAGAGATAGAGTTGCTGCCAGTGCTCTTCAACCTGAGCTTGTGGAGAGAGGCAATTCAATTGGGTCTACTTATATGAAAAACACTTCTCTTGAGGCCCAAAACTTAAATACTGGTGATAACAATGTTGCTATCGATCTCCTTGTTACTGGATTTAGTGAGAATGAAAGGCGTCGTGCGACTGAAAATAATGTCTCTACCACTCTCACCAATGTTTCCCAGTTTAAAACGGAAAAGGAAGTTGAGAAGAGCAATGGTAAAGCAACTTTAGTCTCAGTAGATGAGGACTTGCAGCAAATTGAAGGAGATATGTGTGCTTCTACAACAGGTGTTGTTAGGGTGCAGTCAAGAAAGAAAGCTGAAATGTTCTTAGTTCGAACAGATGGATTCTCTTGTACCAGAGAAAAAGTGACAGAAGCGTCCTTGGCTTTCACTCATCCTAGTACTCAGCAGCAGATGCTTATGTGGAAGTCCACACCAAAGACTGTGTTACTCTTAAAGAAGCTGGGCCAAGAGCTCATGGAAGAAGCAAAAGAGGTGGCTTCTTACTTGTATCACCAAGAGAAAATGAATGTACTTGTTGAACCTGATGTTCATGACATATTTGCCAGAATCCCAGGATTTGGATTTGTTCAGACCTTCTATAGTCAAGATACCAGTGATCTGCATGAGAGGGTTGATTTTGTGGCTTGCTTAGGTGGTGATGGTGTTATACTCCATGCATCAAATTTATTCAGGGGTGCCGTTCCTCCAGTTGTTTCATTTAACCTTGGATCTCTTGGGTTCCTTACTTCTCATCCTTTTGAAGACTATCAGAAGGACTTGAGACAGGTCGTTCATGGGAATAATACACGGGATGGTGTCTATATTACTTTGAGAATGCGTCTCCATTGTGAAATTTTCCGAAATGGTAAAGCAATGCCCGGGAAAGTATTTGATGTCCTCAATGAGGTGGTTGTAGATCGTGGTTCCAATCCATACCTTTCTAAAATTGAATGTTATGAACATGATCGACTAATAACAAAGGTGCAAGGTGATGGAGTCATTATAGCCACACCCACAGGAAGCACTGCTTATTCTACATCTGCAGGGGGTTCCATGGTGCATCCAAACGTTCCTTGCATGTTGTTTACTCCAATCTGCCCACACTCCCTGTCATTTAGACCGGTTATACTTCCTGATTCTGCTCGACTTGAATTGAAGATTCCAGAGGATGCTCGGAGCAATGCCTGGGTTTCTTTTGATGGGAAGAGAAGGCAACAACTCTCAAGAGGAGATTCTGTACGGATATCTATGAGCCAACACCCGCTTCCAACAGTAAACAAGTCTGACCAAACTGGTGATTGGTTTCACAGCTTGATTCGCTGCCTCAATTGGAATGATAGGCTTGATCAAAAGGCCCTGTAA 2874 42.69 MFVTIWTELSQFQTTIESLNTYPPQELPWLGPVPGDIAEVEAYCRIFRAAERLHASLMDTLCNPLTGECNVSYDFPQEDKPLLEDKIVSVLGCIASLLNKGREDVLTGRSSIMNSFSVVDASGDEDRLPPLTIFRREMKRCCESLHVALESYLMPGDDRDLNPWRKLQRLKNVCYDSGYARAEDYPCHTLFANWNPVSLSDSKVDMLSKDSDVAFWAGGQVTEEGLKWLVERGFKTIVDLRAESVKDEFYRAEIKEAIGAGKVELVTIPVDVGTAPSMEQVEKFASLVSDSNRKLIYLHSKEGVRRTSAMVSRWKQYMTRCASQVIINQSLTPTGISQSNNNNLRQSHKKRVEQLVESSISKEMPTLRKENKSLVESLDAIYSSDGSCGDSLLDEDGRYLSLSGDPHSIDSPQGQISVEITENKSESLSRFCMKSDPLKAQVPPCNFFSKEEMSKFFTTKKIAPPTYRNYQQKQLKKFLVSRDTSIKKMRRDRVAASALQPELVERGNSIGSTYMKNTSLEAQNLNTGDNNVAIDLLVTGFSENERRRATENNVSTTLTNVSQFKTEKEVEKSNGKATLVSVDEDLQQIEGDMCASTTGVVRVQSRKKAEMFLVRTDGFSCTREKVTEASLAFTHPSTQQQMLMWKSTPKTVLLLKKLGQELMEEAKEVASYLYHQEKMNVLVEPDVHDIFARIPGFGFVQTFYSQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHPFEDYQKDLRQVVHGNNTRDGVYITLRMRLHCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIIATPTGSTAYSTSAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKSDQTGDWFHSLIRCLNWNDRLDQKAL 957
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10503150 10508261 + Conep07aG0154700.1 Cone7ag1504 442100

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1504 957 Pfam DSP-PTPase phosphatase fused to NAD+ Kinase 186 338 - -
Cone7ag1504 957 Pfam ATP-NAD kinase N-terminal domain 660 770 IPR002504 GO:0003951(InterPro)|GO:0006741(InterPro)
Cone7ag1504 957 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 215 323 IPR029021 -
Cone7ag1504 957 Gene3D - 639 949 IPR017438 -
Cone7ag1504 957 FunFam NAD kinase 2, chloroplastic 784 924 - -
Cone7ag1504 957 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 652 952 IPR016064 -
Cone7ag1504 957 Gene3D - 784 924 IPR017437 GO:0003951(InterPro)|GO:0019674(InterPro)
Cone7ag1504 957 Hamap NAD kinase [nadK]. 650 948 IPR002504 GO:0003951(InterPro)|GO:0006741(InterPro)
Cone7ag1504 957 Pfam ATP-NAD kinase C-terminal domain 804 930 - -
Cone7ag1504 957 Gene3D Protein tyrosine phosphatase superfamily 207 348 IPR029021 -
Cone7ag1504 957 PANTHER NAD KINASE 264 957 - GO:0003951(PANTHER)|GO:0006741(PANTHER)
Cone7ag1504 957 FunFam NAD kinase 2, chloroplastic 639 806 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1504 K00858 - - vvi:100266161 1278.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1431 Cone-Chr4:11394261 Cone7ag1504 Cone-Chr7:10503150 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g216 . . . . . . . . Cmo04g02505 Cmo15g00662 . . . . Sed01g3084 . . Bhi04g01869 Tan11g1240 Cmetu03g0963 . Hepe02g2213 . Lcy10g1253 Cla08g00622 Cam08g1036 Cec08g0626 Cco08g0737 Clacu08g0746 . Cre08g0554 Cone4ag1431 Cone7ag1504 . . . . . Cme03g00495 Blo17g00169 . . Bda13g01468 . Bpe14g00397 . Bma02g00204 . . . . . Car04g02311 Car15g00599 Cpe01g02074 . . . . . . . . . . . . . . . Lsi08g00462 . Chy03g00755 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007207 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 37