Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1515 | ATGCAGGCTCTTTCAATACTGAGCTCTATCTCACAAGGTGATCTACGTCGTGCAATTACTTACTTGCAGTCTGCAGCTCGCTTGTTCGGATCATCAATTTCTTCTAATGACCTGATTAGTGTATCTGGGGTTGTCCCCCAAGAGGTTGTTCAGGCTGTCTCTGCAGCATGTCAAAGTGGTAACTTTGATTCAGCTAACAAGGAAGTCAATGCTGTGATTGCAGAGGGATATCCCGTATCTCAGATGCTTTCACAGTTGTTGGAGGTGGTGGTTGGAGCAGATGATATTGGGGATGAACAGATAGCTAGAATATGCAAGAAGTTGGCTGAAGTTGACAAGTCTCTTGTTGATGGCGCCGATGAATACTTGCAACTACTTGATGTAGCTAGTAATACTATGCAAGCTCTCTCTTAG | 414 | 44.2 | MQALSILSSISQGDLRRAITYLQSAARLFGSSISSNDLISVSGVVPQEVVQAVSAACQSGNFDSANKEVNAVIAEGYPVSQMLSQLLEVVVGADDIGDEQIARICKKLAEVDKSLVDGADEYLQLLDVASNTMQALS | 137 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10545761 | 10546509 | + | Conep07aG0155800.1 | Cone7ag1515 | 442111 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1515 | 137 | Gene3D | - | 1 | 44 | - | - | |
Cone7ag1515 | 137 | Pfam | Replication factor C C-terminal domain | 46 | 129 | IPR013748 | - | |
Cone7ag1515 | 137 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 3 | 134 | IPR050238 | GO:0003689(PANTHER)|GO:0005634(PANTHER)|GO:0005663(PANTHER)|GO:0006261(PANTHER)|GO:0006281(PANTHER) | |
Cone7ag1515 | 137 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 45 | 130 | IPR008921 | GO:0003677(InterPro)|GO:0006260(InterPro) | |
Cone7ag1515 | 137 | Gene3D | - | 45 | 134 | - | - | |
Cone7ag1515 | 137 | FunFam | Replication factor C subunit 4 | 45 | 134 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1422 | Cone-Chr4:11344487 | Cone7ag1515 | Cone-Chr7:10545761 | 6.26E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1515 | K10755 | - | sly:101268826 | 209.92 |