Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1515 ATGCAGGCTCTTTCAATACTGAGCTCTATCTCACAAGGTGATCTACGTCGTGCAATTACTTACTTGCAGTCTGCAGCTCGCTTGTTCGGATCATCAATTTCTTCTAATGACCTGATTAGTGTATCTGGGGTTGTCCCCCAAGAGGTTGTTCAGGCTGTCTCTGCAGCATGTCAAAGTGGTAACTTTGATTCAGCTAACAAGGAAGTCAATGCTGTGATTGCAGAGGGATATCCCGTATCTCAGATGCTTTCACAGTTGTTGGAGGTGGTGGTTGGAGCAGATGATATTGGGGATGAACAGATAGCTAGAATATGCAAGAAGTTGGCTGAAGTTGACAAGTCTCTTGTTGATGGCGCCGATGAATACTTGCAACTACTTGATGTAGCTAGTAATACTATGCAAGCTCTCTCTTAG 414 44.2 MQALSILSSISQGDLRRAITYLQSAARLFGSSISSNDLISVSGVVPQEVVQAVSAACQSGNFDSANKEVNAVIAEGYPVSQMLSQLLEVVVGADDIGDEQIARICKKLAEVDKSLVDGADEYLQLLDVASNTMQALS 137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10545761 10546509 + Conep07aG0155800.1 Cone7ag1515 442111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1515 137 Gene3D - 1 44 - -
Cone7ag1515 137 Pfam Replication factor C C-terminal domain 46 129 IPR013748 -
Cone7ag1515 137 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 134 IPR050238 GO:0003689(PANTHER)|GO:0005634(PANTHER)|GO:0005663(PANTHER)|GO:0006261(PANTHER)|GO:0006281(PANTHER)
Cone7ag1515 137 SUPERFAMILY post-AAA+ oligomerization domain-like 45 130 IPR008921 GO:0003677(InterPro)|GO:0006260(InterPro)
Cone7ag1515 137 Gene3D - 45 134 - -
Cone7ag1515 137 FunFam Replication factor C subunit 4 45 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1422 Cone-Chr4:11344487 Cone7ag1515 Cone-Chr7:10545761 6.26E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1515 K10755 - sly:101268826 209.92