Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1521 ATGGCGGAGAAGGAGATAACAAGTTTGGATGCAGAAGCTGCTTCCATGGTGGTGAAGGAGCTTAGAGAGAGTTTCGCATCCGGTAAGACGAGAAGCTATGAATGGAGAAAATCTCAGCTTCAGAAGCTACTGAAAATCGTGGATAATCATCAGAATGAAATCTACGATGCTCTTCTCTCCGATCTCTCTAAGCCTCAGTATGAATCCTTCATGCAAGAGATCTCTATGTTGAAAACCTCATGTCAGACGGCACTTAAAGAACTTAAGCACTGGATGAAGCCAGAAAAGGTTAAAACTTCACTTACGACATTTCCTTCATCGGCTGAAATTGTTTCAGAACCACTAGGCGTTGCATTGATCATTTCGGCATGGAATTATCCTTTCTTGTTGTCTCTTGATCCAGTTGTTGGAGCCATAGCAGCTGGTAATACTGTGGTTCTAAAGCCATCAGAAATGGCTCCAGCAACATCCTCTTTGCTTGCGAAACTATTGGGAGAATACATGGATAGCTCTGCTGTAAAAGTTGTTGAGGGAGCTGTTTCCGAAACTAGTGCTTTACTCGAGCAGAAATGGGACAAGATATTTTATACAGGAAATTCAAGAGTGGGACGCATTGTGATGACTGCTGCTGCTAAGCACCTTACACCAGTTGTATTAGAGCTTGGTGGAAAATCTCCAGTTGTGGTTGACTCTGACATCAATTTACAAGTCGCAACAAAGCGAATAATAGCCGGTAAATGGGGTAGTAATAATGGACAAGCGTGCATTGCTTGTGACTACATACTTGCAACAAAAGAAATTGCTGCTAAGCTGGTGGAATCTTTTAAACAAGAACTGGAAAAATTCTATGGGAAGAATCCATTGGAATCGAAAGACATATCTCGTGTCGTAAATTCCAACCACTTTGCTCGCCTAACAAAGCTTTTGGATGAGGACAAAGTTGAAGGCAAGATTGTCCACGGAGGTGAAAGGGACAAAACCAACTTGAGAATTGCTCCCACCATTTTGCTGGATGTCCCACGCGACTCTCTGGTGATGACTGAGGAGATATTTGGCCCCCTGCTTCCCATCATCACGGTTGACAAAATAGAAGACAGCTTTGATGTGATAAACTCAGCTCCAAAGCCCTTGGCAGCCTATTTATTTACTAACAACAAGAAGCTCAAGGAGCGGTTTGTCTCCTCCATCTCTGCGGGGGGTATAGTAATCAACGACACAACCTTACATCTTGCTGAACACACGCTACCATTTGGAGGAGTTGGGGAGAGTGGAGTAGGTGCATACCATGGGAAGTTTTCTTTCGATGCTTTTAGCCATAAGAAGGCGGTTCTGTATCGAGGTTTCGGGGGCGATGCATCAGTGAGATATCCACCATATACTAAGGGGAAGTTAAGACTCCTCAGTGCTCTCATTGGCGGTAGTATATTCGGTATAATCCGAGCTCTTTTTGGGCGGTAA 1458 43.9 MAEKEITSLDAEAASMVVKELRESFASGKTRSYEWRKSQLQKLLKIVDNHQNEIYDALLSDLSKPQYESFMQEISMLKTSCQTALKELKHWMKPEKVKTSLTTFPSSAEIVSEPLGVALIISAWNYPFLLSLDPVVGAIAAGNTVVLKPSEMAPATSSLLAKLLGEYMDSSAVKVVEGAVSETSALLEQKWDKIFYTGNSRVGRIVMTAAAKHLTPVVLELGGKSPVVVDSDINLQVATKRIIAGKWGSNNGQACIACDYILATKEIAAKLVESFKQELEKFYGKNPLESKDISRVVNSNHFARLTKLLDEDKVEGKIVHGGERDKTNLRIAPTILLDVPRDSLVMTEEIFGPLLPIITVDKIEDSFDVINSAPKPLAAYLFTNNKKLKERFVSSISAGGIVINDTTLHLAEHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRGFGGDASVRYPPYTKGKLRLLSALIGGSIFGIIRALFGR 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10561375 10565517 - Conep07aG0156400.1 Cone7ag1521 442117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1521 485 SUPERFAMILY ALDH-like 17 449 IPR016161 GO:0016491(InterPro)
Cone7ag1521 485 FunFam Aldehyde dehydrogenase 22 226 - -
Cone7ag1521 485 PIRSF ALDH 2 480 IPR012394 GO:0006081(InterPro)
Cone7ag1521 485 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 219 226 IPR029510 GO:0016491(InterPro)
Cone7ag1521 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 441 IPR016162 GO:0016491(InterPro)
Cone7ag1521 485 FunFam Aldehyde dehydrogenase 223 423 - -
Cone7ag1521 485 Pfam Aldehyde dehydrogenase family 6 443 IPR015590 GO:0016491(InterPro)
Cone7ag1521 485 CDD ALDH_F3FHI 14 445 - -
Cone7ag1521 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 223 423 IPR016163 GO:0016620(InterPro)
Cone7ag1521 485 PANTHER ALDEHYDE DEHYDROGENASE 13 481 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0605 Cone-Chr4:2773319 Cone7ag1521 Cone-Chr7:10561375 8.56E-28 dispersed
Cone5ag1440 Cone-Chr5:9257318 Cone7ag1521 Cone-Chr7:10561375 3.44E-148 dispersed
Cone6ag1661 Cone-Chr6:12657126 Cone7ag1521 Cone-Chr7:10561375 9.74E-160 dispersed
Cone4ag1417 Cone-Chr4:11327271 Cone7ag1521 Cone-Chr7:10561375 0.00E+00 wgd
Cone6ag1237 Cone-Chr6:9852226 Cone7ag1521 Cone-Chr7:10561375 4.67E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1521 K00128 - mtr:25482459 762.681