Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1530 ATGGAAAAGCGGAAATGGTTGTGGAAGAGGAGGTCATCGGATAAGAGCCCCGGAGAAACCGAAAGTTCATGTTCCGTGTCTTCTCCCTCCGAGCAATACTCTGATGATCAGGAACCGGGCAAGGTCTCCCCTAATCACGACGCTGAATCACCTGAAGTATCATCCAAACCTAAATCTAGCAGTGGAGAGGAATTTGACGACAAGTCCTCGCGAAAAGACAAGAATGATACCATGAGGATTCTGACAGAGAAACTGTCGGCTGCTCTTGTGAATGTTAGTGAAAAAGAAGACCTTATAAAGCAACATGCAAGAGTTGCTGAAGAAGCTATTGCAGGGTGGGAGAAGGCTGAAAATGAAGTCAGAGATATAAAGCATCAGCTTGAAACTGCAGTTCAGCAAAAGACAGTATTAGAAGATAGAGCGAGCCATCTTGATGAAGCTCTCAAAGAATGTGTGAAGCAATTGAGAAAAGTAAGAGATGAGCAAGAAGGAAAAATTTTTGAAGCTGTGAAGGAGAAAACTCTTTCCTGGGAATCCACCAAATCGAAACTAGAACAGCAGCTACTTGAGTTTCAGACAAAACATGATTCTTCTCAATCCTTTTCTCTTTCTCATCCTGGCCATGAACTTCATAGCAAGCTCGAATCTATGAGAAAACAAAACTTAGCCCTCAAGCAGGAGCTCCTTTCTCAATCCGAGGCATTAGAGATCAGAACAATTGAGAGGGACTTGAGTACCAGAGCAGCTGAAACAGCTAGCAAGCAATACTTAGAAGGCATAAAGAAGGTGGCAAAGCTAGAGGCAGAGTGTAAGAAGCTAAAATCGGTGTCTGCTAAAACGTCCTTAGCTTATTACAATCATACATCGCCTCGTGCTGCTTCCTCGATTTATATTGGATCCTTAACTGATAGTCAATCGGAAAGTGGTGAAATGAGCTTAGTGGACTCATGGATGGAAAAACCTGTTGATAGAAGCCTCCCTCCATCTTCTACTGAAATAGATAATCTCATGGACGATTTTCTCGAGATGGAGAGACTCGCTGCATTATCCGAGCCAAATAATGGGCCCTGTTTACAAGAATCAGAAGCTAGCTCCGATCAATTGATTAATGCTGACCTTGAAGTTATGAATTGTCAGCTAAAGAAGATGGAAGCAGAGAAAGCTGAAATGGGTGAGAAGCTAGAAAAGATGGAGGTAGAGAAAGCTCGTCTAGAAGAGAAGCTAGAGAAGGTGGAGTTGGAGAAAGTCGAGCTAGAGATTGCTCTTGACGAAAGGGAAGATTGTACACAAGCATCACTGCTTAAACTTAAAGAGGCAGAGGCTAAGCTAGAAGAGTTGAAGAGGGAGCTCATCATTACTAATGAGTCCAAGCAAAGAATTGAGTCTCAACTCGTAAGCATGGAAGCAGAAGCTCGTACCATGTCTGTAAAAGTTGGCTCCTTAGAAGCCGAGGTTAATAAAGAGAACACTTCATCAATGGATAATGAAAAATTTGAAGAAGATTCAAATTCAACTAATGAGCGAACAGTAAAGCAGGATCATCTTGTGGAAGCTTCAGGAAAGAAGCTAGCAGAGTGTCAAAGGACAATAGCATCACTTGGGATTCAATTGAAATCTCTAGCAACTCTTGAAGACTTCTTGATCGATGCTACACATTTACCGGTATTGTCGCCTGAGAAAAGTACGGAGTCCATAGAAACGAAAGAGAACGGTTGTGGATATTTGTCAAGTAAGAATGAAGAAAACTCGCCACCATCTGCATCCTCATCGACTTCATCTTCTACTGTGGTGTCAAGTTATGTTAGTTCGGAGAAGAATCGTAGCGGGTTTTCGAAATTTTTCACTCGGACAAAGAGTGGGATGAAAATAGAAGTTTGA 1878 42.17 MEKRKWLWKRRSSDKSPGETESSCSVSSPSEQYSDDQEPGKVSPNHDAESPEVSSKPKSSSGEEFDDKSSRKDKNDTMRILTEKLSAALVNVSEKEDLIKQHARVAEEAIAGWEKAENEVRDIKHQLETAVQQKTVLEDRASHLDEALKECVKQLRKVRDEQEGKIFEAVKEKTLSWESTKSKLEQQLLEFQTKHDSSQSFSLSHPGHELHSKLESMRKQNLALKQELLSQSEALEIRTIERDLSTRAAETASKQYLEGIKKVAKLEAECKKLKSVSAKTSLAYYNHTSPRAASSIYIGSLTDSQSESGEMSLVDSWMEKPVDRSLPPSSTEIDNLMDDFLEMERLAALSEPNNGPCLQESEASSDQLINADLEVMNCQLKKMEAEKAEMGEKLEKMEVEKARLEEKLEKVELEKVELEIALDEREDCTQASLLKLKEAEAKLEELKRELIITNESKQRIESQLVSMEAEARTMSVKVGSLEAEVNKENTSSMDNEKFEEDSNSTNERTVKQDHLVEASGKKLAECQRTIASLGIQLKSLATLEDFLIDATHLPVLSPEKSTESIETKENGCGYLSSKNEENSPPSASSSTSSSTVVSSYVSSEKNRSGFSKFFTRTKSGMKIEV 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10594933 10597444 - Conep07aG0157600.1 Cone7ag1530 442126

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1530 625 MobiDBLite consensus disorder prediction 489 511 - -
Cone7ag1530 625 MobiDBLite consensus disorder prediction 1 17 - -
Cone7ag1530 625 MobiDBLite consensus disorder prediction 59 78 - -
Cone7ag1530 625 Pfam Filament-like plant protein, long coiled-coil 209 275 IPR008587 -
Cone7ag1530 625 Pfam Filament-like plant protein, long coiled-coil 95 193 IPR008587 -
Cone7ag1530 625 Coils Coil 373 424 - -
Cone7ag1530 625 MobiDBLite consensus disorder prediction 558 607 - -
Cone7ag1530 625 MobiDBLite consensus disorder prediction 18 39 - -
Cone7ag1530 625 Coils Coil 113 140 - -
Cone7ag1530 625 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 619 - -
Cone7ag1530 625 Coils Coil 429 463 - -
Cone7ag1530 625 MobiDBLite consensus disorder prediction 485 511 - -
Cone7ag1530 625 MobiDBLite consensus disorder prediction 1 78 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1530 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1530 Cone-Chr7:10594933 Cone9ag1331 Cone-Chr9:9988723 6.12E-29 dispersed
Cone17ag1283 Cone-Chr17:9212551 Cone7ag1530 Cone-Chr7:10594933 2.07E-117 wgd
Cone20ag0443 Cone-Chr20:2251960 Cone7ag1530 Cone-Chr7:10594933 8.31E-111 wgd
Cone6ag1232 Cone-Chr6:9803174 Cone7ag1530 Cone-Chr7:10594933 2.15E-60 wgd
Cone7ag1530 Cone-Chr7:10594933 Cone9ag1211 Cone-Chr9:8780177 9.63E-59 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g262 . Blo12g00890 . Bda03g00283 . . Bma04g00240 . Cmo04g02471 . . . . . . Cpe06g00076 . . . . . . . . Cla08g00588 Cam08g1003 Cec08g0593 Cco08g0702 Clacu08g0712 . Cre08g0523 . Cone7ag1530 Cone17ag1283 Cone20ag0443 Lsi04g01729 . . . . Blo18g00184 . . . . . . . . . . . Car04g02288 Car09g00102 Cpe01g02050 . . . . . . . . . . . . . . . Lsi08g00434 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003586 3 1 2 3 3 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 2 2 2 47