Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1542 ATGGGAGGAGAAACATCATTTGATATGCTGCGAGAGGCAGTGATGAAAATGAAGCCATACATAGCAATGGTGTCGATGCAGTTTGGATATGCAGGCATGTACATCATTACCATGGTTTCGTTGAAGCATGGTATGAATCATTACATACTTGCTGTGTACCGACATGTCGTTGCCACCGTCGTCATCGCACCCTTTGCTCTTGTCCTCGAAAGGAAAATAAGGCCCAAGATGACTCTCCCCATCTTCCTCAGAATCATGGTGCTCGGTTTTCTAGAGCCAGTGCTGGATCAGAATTTATACTACTTAGGAATGAAATATACCTCTGCAACATTTACCTCTGCAGTTGTCAATGTTCTCCCTGCCATTACCTTCATCATGGCTATCATTTTCAGGCTGGAGATGATTAACTTGAAGAAGATACATAGCATAGCAAAGATAGTGGGAACCACAGTGACGGTCATGGGAGCAATGGTGATGACTCTATACAAAGGCCCAATTCTCAACATATTTGGGGCACATGGGACGGCCGGCCATGGTACTGGCAGCAACAGTGAATCATCTGATCAGCATTGGGTCACTGGCACTATCTTCCTCATCTTGAGTTGCTGTGGTTGGTCTGCTTTCTTCATTTTGCAATCATTCACGTTGAAGAAATACCCAGCAGAGCTGTCATTGACAGGTTTGATATGCTTGACGGGAATGGTAGAAGGTTCGATTGTGTCCCTTATTATGGAACGTGACATGAGTGTTTGGGCTATCGGCTGGGACTCTAGGCTACTTGCTGCTGCTTACTCTGGGATTGTTTGCTCTGGAATAGCTTATTATGTGCAAGGTGTTGTTATCAGAGTCAGAGGCCCTGTTTTCGTCACATCTTTTAGCCCTCTTTGCATGATTATCACCGCCGCACTAGGTTCTATTGTCTTGGCTGAGAAAATCCACCTCGGAAGCGTGATTGGAGCAGTTGTGATAGTGTTTGGGCTGTACACAGTGGTGTGGGGTAAAAGCAAAGATCATCTGTTCAGCTCAACGGCGTCATTGACCAATGAGAAAACAGGTCTGCAAGAGTTGCCGATCACAGCCGTTAATGCCACCAAGGTCAACGGACATGATGAGATTTCTAAGGCTCCTCCTACTTAG 1137 45.73 MGGETSFDMLREAVMKMKPYIAMVSMQFGYAGMYIITMVSLKHGMNHYILAVYRHVVATVVIAPFALVLERKIRPKMTLPIFLRIMVLGFLEPVLDQNLYYLGMKYTSATFTSAVVNVLPAITFIMAIIFRLEMINLKKIHSIAKIVGTTVTVMGAMVMTLYKGPILNIFGAHGTAGHGTGSNSESSDQHWVTGTIFLILSCCGWSAFFILQSFTLKKYPAELSLTGLICLTGMVEGSIVSLIMERDMSVWAIGWDSRLLAAAYSGIVCSGIAYYVQGVVIRVRGPVFVTSFSPLCMIITAALGSIVLAEKIHLGSVIGAVVIVFGLYTVVWGKSKDHLFSSTASLTNEKTGLQELPITAVNATKVNGHDEISKAPPT 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10639328 10641296 - Conep07aG0158800.1 Cone7ag1542 442138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1542 378 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020(InterPro)
Cone7ag1542 378 Pfam EamA-like transporter family 31 151 IPR000620 GO:0016020(InterPro)
Cone7ag1542 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 151 - -
Cone7ag1542 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
Cone7ag1542 378 PANTHER WAT1-RELATED PROTEIN 21 345 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0463 Cone-Chr18:2241742 Cone7ag1542 Cone-Chr7:10639328 5.45E-121 dispersed
Cone5ag0463 Cone-Chr5:1957745 Cone7ag1542 Cone-Chr7:10639328 1.03E-121 dispersed
Cone7ag1542 Cone-Chr7:10639328 Cone7ag1859 Cone-Chr7:12018231 5.68E-67 dispersed
Cone4ag1395 Cone-Chr4:11243721 Cone7ag1542 Cone-Chr7:10639328 3.10E-249 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1542 - - - 0.0