Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1548 ATGGGGTTAGAGAGGGTGCAAGACATTGCCTTGACGGGAACTATCCCCGAGGAGTTTATACGGTTGGAGACGGAGCAGCCGGGAATCACGACCATGCAAGGCGAGGTTCTTGAGGTGCCTGTGATTGATGTGAGCGACCCGGATGAAAGCAAGGTCAATGAAGCAATTCATGAAGCTAGTAGGAATTGGGGAATGTTTCAAATTGTGAACCATGAAATACCAGATGAGGTTATAAGCAAATTGCAGAGTGTTGGGAAGGAGTTCTTCGAGCTGCCTCGAGAGGAAAAAGAGGTGTATGCTAAGCTTCCGGGATCGATCGAAGGGTATGGGACTAAGCTCCAGAAGGAAGTGGAAGGAAAGAAAGGATGGGTCGACCATTTGTTTCATAAGATTTGGCCTCCTTCTGCCATCAACTATAATTTGTGGCCTAAGAACCCAACTATTTACAGGGAGGCGAATGAGGAGTATGCAAAGTACTTGCATAGGGTGGTAGACAAGTTGTTCAAAAGCATGTCATTAGGGTTAGGGCTTGAAGCTGATGCACTGAAGCTAGCAGTCGGCGGGGACGATTTGGAGTACATGATGAAGATCAACTACTATCCCCCATGTCCACGGCCTGATCTAGCCCTCGGTGTCGTGGCTCATACCGACATGAGCACCCTGACCATCCTCGTGCCCAATGATGTTCAGGGCCTCCAAGCCTTCCGAGACGGGCACTGGTACGACGTCAAGTACGTGCCTAACGCTCTAGTCATCCACATTGGTGACCAAACTGAGATATTGAGCAATGGAAAGTACAAGAGTGTTCTCCACAGGACAACAGTGAACGAGGCCAAAACAAGAATGTCATGGCCTGTGTTTTTTGAGCCCCCGGGTTACCATGAAGTAGGGCCTCACCCAAAGCTTGTCGACGAAGAAAATCCAGCAAAATACAAGACCAAGAAATATGCTGACTATGTTTATTGCAAACTCAATAAAATTCCTCAGTAA 990 47.88 MGLERVQDIALTGTIPEEFIRLETEQPGITTMQGEVLEVPVIDVSDPDESKVNEAIHEASRNWGMFQIVNHEIPDEVISKLQSVGKEFFELPREEKEVYAKLPGSIEGYGTKLQKEVEGKKGWVDHLFHKIWPPSAINYNLWPKNPTIYREANEEYAKYLHRVVDKLFKSMSLGLGLEADALKLAVGGDDLEYMMKINYYPPCPRPDLALGVVAHTDMSTLTILVPNDVQGLQAFRDGHWYDVKYVPNALVIHIGDQTEILSNGKYKSVLHRTTVNEAKTRMSWPVFFEPPGYHEVGPHPKLVDEENPAKYKTKKYADYVYCKLNKIPQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10666698 10668016 + Conep07aG0159400.1 Cone7ag1548 442144

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1548 329 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 145 IPR026992 -
Cone7ag1548 329 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 31 323 IPR050295 -
Cone7ag1548 329 SUPERFAMILY Clavaminate synthase-like 13 327 - -
Cone7ag1548 329 FunFam Flavonol synthase 1 327 - -
Cone7ag1548 329 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 290 IPR005123 -
Cone7ag1548 329 Gene3D - 3 327 IPR027443 -
Cone7ag1548 329 Pfam 2OG-Fe(II) oxygenase superfamily 192 290 IPR044861 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1548 K05278 - - cit:102618406 519.62
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1384 Cone-Chr4:11199073 Cone7ag1548 Cone-Chr7:10666698 1.98E-123 dispersed
Cone7ag1548 Cone-Chr7:10666698 Cone8ag0343 Cone-Chr8:1961632 8.63E-91 dispersed
Cone20ag0457 Cone-Chr20:2367967 Cone7ag1548 Cone-Chr7:10666698 1.36E-145 wgd
Cone4ag1383 Cone-Chr4:11196098 Cone7ag1548 Cone-Chr7:10666698 5.13E-186 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g300 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag1548 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003902 1 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 2 1 1 1 1 1 1 2 2 43