Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1552 | ATGACGTCGTGTTCAGGCTCGCTTTGTAGTAACACAAATGTCATGCAAAGACCTAGTCATGAAATTCCGTCGTTTCCTCAAGTGCTTCATAGGAAAAGGATTTCATCCGGTAGTACGACGACTACTACTACTTCAGTTGTAAGCAAGAACGATTCCTGTTCTTCTTCATCCTGTTCTTCTTCAAGAATATCATCATCCACCATACAATTAGTATCTGATCATTCCTCGCTGGAAGTCAGTAAGAATAAGAATGATATTCATAAAGGGCTCGTCTCTAATTCCATACGGGCTGCTCCATCGTATTCATTGTCTACATCCAGTTCAAGCAGTTACTCCTTTAAAGGAATGGGTTTGAGCAAGCTTTCTGGATGTTATGAATGCCGAATGGTGGTCGATTCCGTTTACGGAATCGCTAGTACACGACATTCTTCTCCCAGAGCTGCCCTTTTCCCTTGTCCTCAATGTGGTGACATTTTCATGAAACCTGATCATCTAGAGCTTCATCAAGCCGTCAACCATGCAGTATCTGAGCTTGCAGCAGAAGATACAAGCAAGAACATAGTGGAGATAATATTCCAATCAAGCTGGCTAAAGAAACAGACACCAATCTGCCAGATCGACCGCATCCTTAAAGTTCACAACACACAAAAAACACTCTCTCAATTCGAAGAGTACAGAGACAGCATCAAGTCGAAAGCGAACAAGCAGCAACTACTGCTCTCCAAGACTAAGCATGCTCGTTGCATAGCAGACGGAAACGAGCTTCTCCGTTTCCATTGCACCACGTTGTCCTGCTCTCTAGGCCTAAACGGCTCGTCTAATCTATGCAAGTCCTCGAGTAGTAGTACTGACCGACAAGAACTACCATGCCACGTATGTGACATCATAAGGAACGGTTTCAAACTTGGTGAGTCCGGGATTTTGACGACGGGGACAAGCGGGAAGGCGCATGATAAGGTTTGTGAGGGTGAAGGCGAGGGTCAGAAGAGGGCTATGTTGGTTTGTAGGGTGATTTCAGGGAGAGTGAAGAAGAACTTGTTTCTGGATGATCAGGTGGGGAGTATTAGTAGCAGTAGTAGTAGTACGGAGGAGTATGACTCAGTTTTGGGGGGAGATACTAATGATCATGATCACGTGGGAGTTTATTCAAATTTGGATGAGTTATATGTGTTTGATCCTAAAGCTATTTTGCCTTGTTTTGTTGTTATCTATGGCGGCTTTTAG | 1224 | 44.04 | MTSCSGSLCSNTNVMQRPSHEIPSFPQVLHRKRISSGSTTTTTTSVVSKNDSCSSSSCSSSRISSSTIQLVSDHSSLEVSKNKNDIHKGLVSNSIRAAPSYSLSTSSSSSYSFKGMGLSKLSGCYECRMVVDSVYGIASTRHSSPRAALFPCPQCGDIFMKPDHLELHQAVNHAVSELAAEDTSKNIVEIIFQSSWLKKQTPICQIDRILKVHNTQKTLSQFEEYRDSIKSKANKQQLLLSKTKHARCIADGNELLRFHCTTLSCSLGLNGSSNLCKSSSSSTDRQELPCHVCDIIRNGFKLGESGILTTGTSGKAHDKVCEGEGEGQKRAMLVCRVISGRVKKNLFLDDQVGSISSSSSSTEEYDSVLGGDTNDHDHVGVYSNLDELYVFDPKAILPCFVVIYGGF | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10684926 | 10686247 | - | Conep07aG0159800.1 | Cone7ag1552 | 442148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1552 | 407 | SUPERFAMILY | ADP-ribosylation | 175 | 405 | - | - | |
Cone7ag1552 | 407 | Gene3D | - | 173 | 405 | - | - | |
Cone7ag1552 | 407 | MobiDBLite | consensus disorder prediction | 31 | 61 | - | - | |
Cone7ag1552 | 407 | MobiDBLite | consensus disorder prediction | 15 | 61 | - | - | |
Cone7ag1552 | 407 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 152 | 173 | IPR013087 | - | |
Cone7ag1552 | 407 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 45 | 404 | - | - | |
Cone7ag1552 | 407 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 150 | 178 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag1968 | Cone-Chr4:13835607 | Cone7ag1552 | Cone-Chr7:10684926 | 3.20E-92 | dispersed | |
Cone5ag1093 | Cone-Chr5:4864741 | Cone7ag1552 | Cone-Chr7:10684926 | 1.77E-59 | dispersed | |
Cone7ag1552 | Cone-Chr7:10684926 | Cone7ag1881 | Cone-Chr7:12127236 | 4.88E-88 | dispersed | |
Cone17ag1266 | Cone-Chr17:9127782 | Cone7ag1552 | Cone-Chr7:10684926 | 8.32E-115 | wgd | |
Cone4ag1379 | Cone-Chr4:11178786 | Cone7ag1552 | Cone-Chr7:10684926 | 7.88E-235 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46573 | PF12895 | ANAPC3 | 3.50E-16 | CL0020 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1552 | - | - | - | 0.0 |