Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone7ag1559 | ATGCAGCATCTACCACATATTTTCACTCACAGCCGGCGGACTAGACGCATCGATCCGAGGAGCAAAGGAAAACCGAGGCTTGAGCGTCAGAATGCTCAGAGGAACATAGAATATGACGCCGGATCTTCTTCTTCTTCGACGCTGGACGGTTCATCGGAACCCCTGCACACTCTATCGCTTGAGTTGTTGAGCCAAACGAGCTTTCGGATAGAAGGAACTGATGGTGAGTTTGATCGGCTATGTCGGAGTTTGGGCCTCTCAGGTCCCGATGACTTTGCTATTCCAACGGCGGCGTGGGACGCTAGGAAGGTCCGCTCGTCCTCGGATCGTGTAGCGAGATCCAACTTGCAGGATAGTCTGACGGACAACAAGGAAGTTGAAGCTGAATTGTGTGCGAGGGTTGTGGATACTGTTAGGATTGGGGATTTGACTGAGTTGACTCGGAATCAACAGGTCAAAACGGGTGAGAAATCTATTCTTATAGATAGGAGTAGTGGAGGTGTAGGAGGTGGAATCAAAGGTGTTCGACCCCCGGTACTTAAACCGCCGCCGAGCATGAGTATTCCGATGATTGATAGTAAGAGTTCAACTTGGGACATTTGCAGGAATTTCGGTCCGGATGATGAAATACGCCCTTCACAAGGAGTCCGAGGTCGGAATAGTTCTTCTTCCGAAGATGGTGATGACAGAGAAGAAGCTTACGTATCAGCTTTTAAGGGCGAAGTGGAGCGGAATCTGGTTGGGCTTCGGAAGAGTGCTGCCTTTTTTGAGTCTCCTTGTTGTTCCTTTACAACTTCAAACGATGATGATTCTTCGAGCACTACCACGGAGCCTCCGTCCAGTATTTCACCGAATGGGAGGTTGCCCACCATCACGTCCTGGCAAAAAGGTCAACTTCTTGGCAGCGGTTCATTTGGATCAGTATATGAAGGAATTTCTGATGGTGGATTTTTTTTCGCCATCAAGGAAGTTTCATTGCTCGATCAAGATAGCCAAGGAAGGCAAAGTATTTCTCAGCTTGAGCAGGAGATCGCTCTTCTAAGCCGGTTTAAGCACGAGAACATAGTCAGGTATCATGGCACAGCTAAGGATGAATCAAAACTCTATATCTTTCTTGAGCTTGTAACCCAAGGGTCCCTCATGAATCTCTATCAGAGGTATCATCTTCGAGATAGCCAAGTCTCCGCTTACACAAGGCAGATTCTTCATGGCTTGAAGTATCTGCATGACCAAAATGTGATTCACAGGGACATCAAATGTGCAAATATTCTGGTGGATGCCAATGGATCAGTGAAGCTTTCAGATTTTGGATTGGCAAAGGCAACAAAACTGAACGATGTTAAATCTTGCAAGGGCACTGCATTCTGGATGGCACCAGAGGTTGTTAATAGGAGGAGTCAAGGGTATGGCCTTCCAGCTGATATCTGGAGCCTTGGCTGCACTGTCTTGGAGATGTTGACCGGTCAGATTCCATATGCTGAGTTGGAATGGGTGACGGCAGTATATAGGATCGGAAAGGGCGTGCTTCCTTATGTTCCCGATTCTCTCTCACAAGATGCACGGGATTTCATTTTGAAGTGCCTACGGGTTAATCCAAGTGACCGCCCCACTGCCGCTGAATTATTAAAGCATTCATTTGTGAAGATTCCACTTCCCACTAACTCAGGCTCAGCATCTCCTTTCAATCATGGCAGAAGGCATTAG | 1704 | 47.48 | MQHLPHIFTHSRRTRRIDPRSKGKPRLERQNAQRNIEYDAGSSSSSTLDGSSEPLHTLSLELLSQTSFRIEGTDGEFDRLCRSLGLSGPDDFAIPTAAWDARKVRSSSDRVARSNLQDSLTDNKEVEAELCARVVDTVRIGDLTELTRNQQVKTGEKSILIDRSSGGVGGGIKGVRPPVLKPPPSMSIPMIDSKSSTWDICRNFGPDDEIRPSQGVRGRNSSSSEDGDDREEAYVSAFKGEVERNLVGLRKSAAFFESPCCSFTTSNDDDSSSTTTEPPSSISPNGRLPTITSWQKGQLLGSGSFGSVYEGISDGGFFFAIKEVSLLDQDSQGRQSISQLEQEIALLSRFKHENIVRYHGTAKDESKLYIFLELVTQGSLMNLYQRYHLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDANGSVKLSDFGLAKATKLNDVKSCKGTAFWMAPEVVNRRSQGYGLPADIWSLGCTVLEMLTGQIPYAELEWVTAVYRIGKGVLPYVPDSLSQDARDFILKCLRVNPSDRPTAAELLKHSFVKIPLPTNSGSASPFNHGRRH | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10715928 | 10720486 | - | Conep07aG0160500.1 | Cone7ag1559 | 442155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone7ag1559 | 567 | ProSitePatterns | Protein kinases ATP-binding region signature. | 300 | 322 | IPR017441 | GO:0005524(InterPro) | |
Cone7ag1559 | 567 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 413 | 425 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone7ag1559 | 567 | MobiDBLite | consensus disorder prediction | 167 | 231 | - | - | |
Cone7ag1559 | 567 | Gene3D | Transferase(Phosphotransferase) domain 1 | 292 | 560 | - | - | |
Cone7ag1559 | 567 | MobiDBLite | consensus disorder prediction | 264 | 288 | - | - | |
Cone7ag1559 | 567 | Pfam | Protein kinase domain | 295 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1559 | 567 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 20 | 548 | IPR050538 | - | |
Cone7ag1559 | 567 | SMART | serkin_6 | 294 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone7ag1559 | 567 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cone7ag1559 | 567 | FunFam | Mitogen-activated protein kinase 1, putative, expressed | 292 | 559 | - | - | |
Cone7ag1559 | 567 | SUPERFAMILY | Protein kinase-like (PK-like) | 293 | 548 | IPR011009 | - | |
Cone7ag1559 | 567 | MobiDBLite | consensus disorder prediction | 35 | 52 | - | - | |
Cone7ag1559 | 567 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Cone7ag1559 | 567 | ProSiteProfiles | Protein kinase domain profile. | 294 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0942 | Cone-Chr12:8202842 | Cone7ag1559 | Cone-Chr7:10715928 | 7.44E-74 | dispersed | |
Cone20ag0460 | Cone-Chr20:2387780 | Cone7ag1559 | Cone-Chr7:10715928 | 2.68E-20 | dispersed | |
Cone7ag1559 | Cone-Chr7:10715928 | Cone8ag0976 | Cone-Chr8:9169745 | 1.72E-170 | dispersed | |
Cone7ag1553 | Cone-Chr7:10688013 | Cone7ag1559 | Cone-Chr7:10715928 | 1.53E-20 | proximal | |
Cone17ag1261 | Cone-Chr17:9077026 | Cone7ag1559 | Cone-Chr7:10715928 | 1.09E-178 | wgd | |
Cone20ag0467 | Cone-Chr20:2449845 | Cone7ag1559 | Cone-Chr7:10715928 | 3.76E-176 | wgd | |
Cone4ag1372 | Cone-Chr4:11134160 | Cone7ag1559 | Cone-Chr7:10715928 | 0 | wgd | |
Cone6ag1606 | Cone-Chr6:12440854 | Cone7ag1559 | Cone-Chr7:10715928 | 5.42E-26 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83069 | PF00083 | Sugar_tr | 5.30E-67 | CL0015 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone7ag1559 | K13414 | - | rcu:8274146 | 674.085 |