Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1573 ATGTCGAGGATTGCTAAGTGGAACCTTGAGAAGACAAAAGTGAAGGTGGTCTTCAGACTGCAATTTCATGCTACACATATTCCACAATCTGGATGGGATAAGCTGTTTATATCTTTCACTCCGGCCGATTCCGGAAAGGCTATAGCAAAGACAACCAAAGCAAATGTGAGAAATGGTTCCTGTAAATGGGCAGATCCAATCTATGAAACCACAAAACTTCTACAAGACATTAAAACGAAACAATATGATGAGAAGCTCTATAAATTCGTGGTGGCTATGGGTTCTTCACGGTCCAGTATACTTGGGGAGGCCAATATCAACCTTGCTGATTATGCTGATGCATTAAAGCCTTATGCTATTGCTTTACCCCTTGATGAATTGGAATCTGGACCACTTCTACATGTCACTGTACAGCTGCTAACTTCCAAAACTGGTTTCAGGGAATTTGAACAGCAGAGGGAACTCAGAGAGAGGGGTCTTCAGACATCCACTGATCTGGGTAGTCATGATGAATCTCCTAGACGAAAAGGTCCACTTTCTGAAGATATTTCCGATGGCCCTACAGATAAGGTAAATGTGAAAGAAATTTCTAAAGGGCTGAGATCTCAGGAAGAAGAATTGCGAATAAGTGATGCAGATTCTGCTGCTGGTTTCAACGGCTCTTCCAATATCTCAGAGACCATATCTGCCGAGAAACATGACCTAAGTGGATTTTCCCTTGCTCAAAGCCCCCAACCAGAAAAAGTGGACCCTGCTGATTATCGGCTTTTGGTGCAGAGGACCAATGATTGGTCCCAGGGCTCAGGTTCTGAATACTCTGCAGATAATGACTTAGCTATTGTTCATGAAGAGAACTGTAGACTTAGACGGAGCTTGGAAGTTGCTGAATCCTCCATTACTGAGCTGAAGCTAGAGATGAGCTCCTTACAGAATTATGCCAATGAGATTGGAATTGAAACACAAATATTTTCCCAGAAACTTGCTAGTGAGGTTACTTCGAGAAAAGAACTCGTAATAGAAGTTCTGGAGCTGAAATCAGAATGTGCAAAGCTCAAAGGTGATCTGAACCTTTTAAAATGTTTCAAATCAAGCCTTCCAATCACCAGTAAAGAAGTTATCGAGATTGATCAGAAGCACTTACCTCAAGGTTTGGATATCAGATGGCTCAAGGCCGTTCTAATAATGGAGGAAAAATTAAGAGCTATTCAGAATAAGGCATGTGTTGGATTTCAAGAGAGAGATTTTATGTTTCTTCACGCAGATTTGGAGGAGATGCTCTGTCTCTTGCAGGAATTCAAACAAGTAACTCAATGTTCAGTTTCTGGGATCAATAGTCAATATCAGTCAGAAACCATGCACCATTGTCTTAGCATTCCAGGCCTGGGCCCCCACAATTCTGATTCTCTAGATTCCACTAATGCAATGAAAGGGAAACTCATAGAACTTGTGAGGGAGTTAGATGAGTCAAAAGCTGAACAGGAAAGTCTTGTGAGGAAAATGGCCCAAATGGAGTGCTACTATGAAGCTCTCATCCAAGAGCTCGAGGAAAATCAGGGTCGAATGATGGGAGAGTTGCAGAGTCTTAGAAACGAACATGCTACTTCCCTATATGCAATTGCAACTACTAAAGCTGATATCGAAACCATGCACCTTGACATGAATAAGCAGTTAATGAGATTTGCTCAGGAAAAGCACGACTTGGAATCTTTTAACAAGGAGCTTGAAAGGAGGGCTGCTACTGCTGAAGTGGCTTTGAAGAGGGTCCGTTTGAATTACTCCATTGCCGTGAACCAGCTTCAGAAAGACCTTGAATTACTTTCTTCCCAGGTCGTGTCAATGTTTGAGACTAATGAGAACCTAATCAAGCAAGCTTACATAGATCCTTCATTGCCAAGCTGTAATGGGTTCTCTGAAATGGTGGAAAAGAATCATTTTGCTGGGGTAAAGAAACAACAATTAAGTGAAAATATGCTGTCAGGCTACTTGAATAGGTCGCTGAACTTACGGGAAGAAGTGTACTGGAAGGTTGAAGATGATCTGGGTGATGTGTACTTAAGGCTCATTTACTTGGACGTATTTTCAAAGATTCTACAGGAAACTTTATGTGAAGCAAATGATGAATGTAGACTCATGAAAAAAGATATAGATGCACTTAGACAGCAGCTCATCGTTTCTACCAAATCTGAGGAGTTACTGATGCTGAGACTAAAAAAGGCTATGGATGAGGTTGACTCTCTTAATCAGTACCAGGCTACTTACATTGCAAAATACAATGAAGTGGCTTTGAAAACAGAATCTTTGGAGGCAAATTTACAAAATGCCAACCATGAGAATTGTTTACTTACCCAGAAGATTACAGAATGTGATGCCCAGATGATGGAATACAAAGATTATGGGAGGAAGTTTCAGGCCTGCGCTGCAGAGAAACTAGAGCTGGAGAATTCATTGAAGGAACGTATAGAAAATGAAAATCTTCAGAATGAGATTTCCTGTTTGCATCAGGAGTTGAAAGCTGTCAGAAGTGAATGTGATGGTATGGTTCCTGAAAGGGAGAAATTACAGGATATTGTCAACTTCAACTCCTCTAAGCTCAGGGCCTTGTTGGAATCCTACTATAGAGACTATAAAGATCTTTCTCTCTTGGGTGAATCTGTCGAAGAGGATGTGGATTCTATGAACTTCACAGATCTTGCTTTGTACTTAGAAGAGCTTCATCAGAATTCATGCAAGAAGATTCTTGAGCTCGTAGAAGATAATAAAGTGCTAATAGAAGAAAGGAATATGGTCCAAGAGTCCTTAAGCAAAGCCGAATCAGGTAATCTGATCATGAAGGAAAAGTTTGAAAATGATATACGGAACATGGTGGATGGTATAGATTTGTCTAATGTCCGGGTTCGGAAAATTCAGCTCAAGGCTGAGGCTATTTCTACCAGGCTCAATGGTAGCTCTGAAGCTGAAGAAAAATTCATGCAGCGGCACAGAGAACTTGTATCTGATCTTGATCATCTAGAAGGTGAACTACAAGAACTTTCTTCTAAAAACCAGGAACTTTCTGAGGAAATTGCTGTGCTGGGATCAGTAAATGAGGAGCTTGAAAGTTGCAAGCTGACCATGGCTGTGGTTATGGGGGAGAAAGAAGCTTTAATGGGATCTTTACAGGAAAAAGAAGAAGAATCTACTAGGCTTAAATTAGAGCTTAATACTTTGAATGAAAGTTTGCAATCTCTGCATGATGACTTGGGTGTTGAGAAAAGCTTCAGAGATAAACTAGAAAGTACAGTTTCAGATCTTGATTCTGAATTGAAGGAGAAGAATTTCCAGTTGCTACAACTTGATCAGCTTAAATCTGAACTTGCTAGTCTCAGGATGTCAGTATCAGATTTGGAATCAGAGAAATCAAGAGTCCATAATCTCTTCTTGCAGTCCGAGGAATGTCTTAAAAATCTTCGTCAAGAAAATTCTTCTTTGACTTGTCTAGAAACTCAGTTTACAGAAATGCTCAAGCTTTTAATTGCTGCGGAAGTTGGACTGGTTTTCACAAAAACTCAGTATCAAGTTTGGGTTGAGGACCTGGTTGAACAACTTTCCTCCAAGGAGAGAAAATTTTCCAATCTTCAGAAGGAATATCTAAAAGTTGAAAACGCCCTTAATTGCTGCATTGCTAATGAAGTGCATCACAAGGAAGAGAATGCTAGAATGTTGCAATGTCTTAATTCTCTAAAGCCGGAGTTGAAGGACTTTGCTACAGAGAACAGAGAACTTCTTGATATAAACAAGGACATGATGATTCAACTTGACGAATTTAGGGATAAGATTGGCAATATGGAGACTGCTTTTAAAGAGGATAAAACTGCACACACTCTTGAGGTTGAAAGGCTGAAGCTCATGCTAGTCACTTATGAGGAAGAGATTGATAACTTGACCTCCTCCAAGGAAGAACTTGAAATGAAGTATTTAGTACTCAAATCCAAATTGGATGAGCAACACGGTTATTTAACCATGCTGGAAGGATCTTGTGATGAACTGATAATAATGCAGAACAAATGTAGTGAACTGTCTCACAGACTTTCTGAACAAATATTGAAGACTGAAGAGTTTAAGAATTTGTGCACCCATTTGAAGGAGCTTAAAGACAAGGCAGAAGCTGAATGTCATCAGGCTCAAGAGAAAAGAGAACCAGAAGGACCACCCATTGCCATGCAAGAGTCTCTAAGAATTGCATTTATCAAAGAACAGTATGAAACCAAGCTACAGGAATTGAAGCACCAACTCTCTGTTTCCAAAAAGCATAGTGACGAAATGCTGTGGAAACTGCATGATGCGCTGGATGAAGTTGAGAACAGAAAGAAATTAGAAGTGTCACACTTGAAAAGAAATGAAGAGTTGGGGATGAAGATCCTTGAATTGGAGGCTGAGTTGAATTCAGTTGTTTCTGCGAAACGTGAGATAAGGATGGCTTATGATCTTGTTCAAGCTGAAAAGGAATGCTCTTCTATAAGCCTTGAATGCTGCAAGGAGGAAAATAAAAAACTTGAAGCTTCTTTGCAGAAATGCAGTGAGGAGAAGTCTGAAATCGGTCTAGAACGTAACCGTTTAAAAGAGCTGCTTGAGAGTTGTAAATCTCCTATAAATATTCAGCAGGAAAACAATGGAACAGAGAAAGTGGATTGCAAACCTGATGGGCTGGTCTTTAATGACCCAGACCAAACAAGTCAACATTCTACCACAGATATAAACAATGAGCTACCCAAGCAGGATGTCGTCTCTAGAGAAGTTAATGGACTTCCAGCTCTTGCACTTCTAAATGAAGGGAATGATCATTTCACTGCAGAGAGCTTAAGATCAAGCATGGCCCGCTTAAATGAAGAGTTAGAAAAGATGAAAAGTGAGAATTCTCTTCTTAAAGAGGATAATCATTCCGATTTGGACTTTCCAGGTGTACAAAGAGAGTTATTGCAATTGCACAAGGCAAATGAAAAAATGGCTTGCATGTACCCTTTGTTCAAAGAATTTTCAAGCGGTGGCAATGCATTAGAAAGGGTGCTAGCTTTAGAAATCGAGCTGGCTGATGCTTTGCAGGAAAAGAAGAAATCAAGCTTTCATTTTCAGAGTTCTTTCTTGAGACAACATAGTGATGAGGAAGCAGTGTTTCAAAGCTTCAGAGACATAAATGAGCTGATCAGAGACATGTTGGAGCTAAAGGGAAAGCACACATGTATGCAGAGTGAACTTAAAGAGATGCATGACCGCTATTCTCAGTTAAGCCTTCAATTTGCAGAGGTTGAAGGAGAGAGACAGAAACTGATGATGACTCTCAAGAATGTCAGGTCAACCAAGAAGTCACCAATAAACCGATCTTCATCCCTCACTCTGGATGAGCATTCTCCATAG 5391 40.2 MSRIAKWNLEKTKVKVVFRLQFHATHIPQSGWDKLFISFTPADSGKAIAKTTKANVRNGSCKWADPIYETTKLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEANINLADYADALKPYAIALPLDELESGPLLHVTVQLLTSKTGFREFEQQRELRERGLQTSTDLGSHDESPRRKGPLSEDISDGPTDKVNVKEISKGLRSQEEELRISDADSAAGFNGSSNISETISAEKHDLSGFSLAQSPQPEKVDPADYRLLVQRTNDWSQGSGSEYSADNDLAIVHEENCRLRRSLEVAESSITELKLEMSSLQNYANEIGIETQIFSQKLASEVTSRKELVIEVLELKSECAKLKGDLNLLKCFKSSLPITSKEVIEIDQKHLPQGLDIRWLKAVLIMEEKLRAIQNKACVGFQERDFMFLHADLEEMLCLLQEFKQVTQCSVSGINSQYQSETMHHCLSIPGLGPHNSDSLDSTNAMKGKLIELVRELDESKAEQESLVRKMAQMECYYEALIQELEENQGRMMGELQSLRNEHATSLYAIATTKADIETMHLDMNKQLMRFAQEKHDLESFNKELERRAATAEVALKRVRLNYSIAVNQLQKDLELLSSQVVSMFETNENLIKQAYIDPSLPSCNGFSEMVEKNHFAGVKKQQLSENMLSGYLNRSLNLREEVYWKVEDDLGDVYLRLIYLDVFSKILQETLCEANDECRLMKKDIDALRQQLIVSTKSEELLMLRLKKAMDEVDSLNQYQATYIAKYNEVALKTESLEANLQNANHENCLLTQKITECDAQMMEYKDYGRKFQACAAEKLELENSLKERIENENLQNEISCLHQELKAVRSECDGMVPEREKLQDIVNFNSSKLRALLESYYRDYKDLSLLGESVEEDVDSMNFTDLALYLEELHQNSCKKILELVEDNKVLIEERNMVQESLSKAESGNLIMKEKFENDIRNMVDGIDLSNVRVRKIQLKAEAISTRLNGSSEAEEKFMQRHRELVSDLDHLEGELQELSSKNQELSEEIAVLGSVNEELESCKLTMAVVMGEKEALMGSLQEKEEESTRLKLELNTLNESLQSLHDDLGVEKSFRDKLESTVSDLDSELKEKNFQLLQLDQLKSELASLRMSVSDLESEKSRVHNLFLQSEECLKNLRQENSSLTCLETQFTEMLKLLIAAEVGLVFTKTQYQVWVEDLVEQLSSKERKFSNLQKEYLKVENALNCCIANEVHHKEENARMLQCLNSLKPELKDFATENRELLDINKDMMIQLDEFRDKIGNMETAFKEDKTAHTLEVERLKLMLVTYEEEIDNLTSSKEELEMKYLVLKSKLDEQHGYLTMLEGSCDELIIMQNKCSELSHRLSEQILKTEEFKNLCTHLKELKDKAEAECHQAQEKREPEGPPIAMQESLRIAFIKEQYETKLQELKHQLSVSKKHSDEMLWKLHDALDEVENRKKLEVSHLKRNEELGMKILELEAELNSVVSAKREIRMAYDLVQAEKECSSISLECCKEENKKLEASLQKCSEEKSEIGLERNRLKELLESCKSPINIQQENNGTEKVDCKPDGLVFNDPDQTSQHSTTDINNELPKQDVVSREVNGLPALALLNEGNDHFTAESLRSSMARLNEELEKMKSENSLLKEDNHSDLDFPGVQRELLQLHKANEKMACMYPLFKEFSSGGNALERVLALEIELADALQEKKKSSFHFQSSFLRQHSDEEAVFQSFRDINELIRDMLELKGKHTCMQSELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNVRSTKKSPINRSSSLTLDEHSP 1796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10776979 10785219 + Conep07aG0162000.1 Cone7ag1573 442169

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1573 1796 Coils Coil 822 842 - -
Cone7ag1573 1796 MobiDBLite consensus disorder prediction 156 197 - -
Cone7ag1573 1796 Coils Coil 1610 1637 - -
Cone7ag1573 1796 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
Cone7ag1573 1796 Coils Coil 993 1027 - -
Cone7ag1573 1796 Coils Coil 1410 1430 - -
Cone7ag1573 1796 Coils Coil 1290 1324 - -
Cone7ag1573 1796 Coils Coil 1188 1215 - -
Cone7ag1573 1796 Coils Coil 1363 1390 - -
Cone7ag1573 1796 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 933 - -
Cone7ag1573 1796 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Cone7ag1573 1796 Coils Coil 557 591 - -
Cone7ag1573 1796 Coils Coil 1501 1524 - -
Cone7ag1573 1796 Coils Coil 1045 1072 - -
Cone7ag1573 1796 Coils Coil 479 499 - -
Cone7ag1573 1796 MobiDBLite consensus disorder prediction 1775 1796 - -
Cone7ag1573 1796 Coils Coil 334 354 - -
Cone7ag1573 1796 Coils Coil 511 531 - -
Cone7ag1573 1796 Coils Coil 292 312 - -
Cone7ag1573 1796 Coils Coil 757 777 - -
Cone7ag1573 1796 Coils Coil 1087 1107 - -
Cone7ag1573 1796 Coils Coil 1111 1131 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1573 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0223 Cone-Chr3:1178342 Cone7ag1573 Cone-Chr7:10776979 1.71E-23 dispersed
Cone6ag0766 Cone-Chr6:3901717 Cone7ag1573 Cone-Chr7:10776979 1.53E-07 dispersed
Cone7ag1573 Cone-Chr7:10776979 Cone8ag0317 Cone-Chr8:1835185 2.74E-49 dispersed
Cone4ag1360 Cone-Chr4:11064088 Cone7ag1573 Cone-Chr7:10776979 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g355 . . . . . . . . Cmo04g02413 . . . . . . . . . . . . . . . . . . . . . . Cone4ag1360 Cone7ag1573 . . . . . . . . . . . . . . . . . . . Car04g02229 . Cpe01g02004 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005592 0 4 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 3 2 40