Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone7ag1594 ATGGAGTGGTTGTGCTGCTTTAGTTCTCACTCCAAGCTTGCGAGAGTACAATCCTCGTCTAGCTCAGGTAGGGGAAGAAGCCATGAAGGGCTAATCAAGTATGGTTTCAGCCTAGTAAAAGGGAAAGCAGATCATCGCATGGAGGATTATCATGTTTCTAAGTTTGTTCAGATTCAAGAAAATGAGTTAGGGCTCTTTGCTATTTTTGACGGTCATCTTGGAGAAACCGTCGCCGCCTATCTACAAAAGCATCTGTTCTCTAACATCCTAAAGGAGGAAGAGTTTTGGGTGGACCCCCAGAGAGCTATATCAAAAGCCTATGAGAAGACGGACCAGGCAATTCTCTCGCAGAGTGCTGACTTGGGGAGAGGTGGGTCCACAGCTGTTACGGCAATTTTGGTTAATGGTCAAAGGTTATATGTAGCCAATGTTGGAGATTCAAGAGCTGTTATTTCAAAGCGTGGTCAAGCAGTGCAAATGACCATTGACCATGAGCCCAACACAGAACGAGGCATCATTGAGAACAAAGGCGGCTTCGTCTCAAACATTCCAGGAGATGTCCCTAGAGTTAATGGGCAGTTGGCCGTTTCTCGTGCTTTTGGAGACAAGAGCCTCAAATTACATTTGCGATCTGATCCCGACATACAGAATTCTGATATTGATGATCATACGGATATACTAATCCTTGCCAGCGACGGCCTTTGGAAGGTAATGGCGAATCAAGAGGCGGTTGATATTGCAAGAGGGATCAAAGATCCAATGAAGGCTGCTAAGCAATTAACAGCTGCAGCATTGAAGAAAGAAAGCAAAGACGATATATCTTGCATTGTGGTTAGATTTACGTGA 846 44.8 MEWLCCFSSHSKLARVQSSSSSGRGRSHEGLIKYGFSLVKGKADHRMEDYHVSKFVQIQENELGLFAIFDGHLGETVAAYLQKHLFSNILKEEEFWVDPQRAISKAYEKTDQAILSQSADLGRGGSTAVTAILVNGQRLYVANVGDSRAVISKRGQAVQMTIDHEPNTERGIIENKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKLHLRSDPDIQNSDIDDHTDILILASDGLWKVMANQEAVDIARGIKDPMKAAKQLTAAALKKESKDDISCIVVRFT 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10900747 10903080 + Conep07aG0164100.1 Cone7ag1594 442190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone7ag1594 281 SUPERFAMILY PP2C-like 30 280 IPR036457 -
Cone7ag1594 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Cone7ag1594 281 PANTHER PROTEIN PHOSPHATASE 26 278 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone7ag1594 281 Gene3D - 28 281 IPR036457 -
Cone7ag1594 281 SMART PP2C_4 29 278 IPR001932 -
Cone7ag1594 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Cone7ag1594 281 CDD PP2Cc 32 280 IPR001932 -
Cone7ag1594 281 FunFam Probable protein phosphatase 2C 39 25 281 - -
Cone7ag1594 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0160 Cone-Chr6:787673 Cone7ag1594 Cone-Chr7:10900747 1.28E-109 dispersed
Cone7ag1594 Cone-Chr7:10900747 Cone8ag1519 Cone-Chr8:11461738 6.20E-112 dispersed
Cone17ag0937 Cone-Chr17:7332025 Cone7ag1594 Cone-Chr7:10900747 4.57E-25 wgd
Cone17ag1218 Cone-Chr17:8842993 Cone7ag1594 Cone-Chr7:10900747 2.95E-147 wgd
Cone20ag0507 Cone-Chr20:2741321 Cone7ag1594 Cone-Chr7:10900747 7.36E-132 wgd
Cone20ag0280 Cone-Chr20:1254286 Cone7ag1594 Cone-Chr7:10900747 3.68E-26 wgd
Cone4ag1335 Cone-Chr4:10921634 Cone7ag1594 Cone-Chr7:10900747 3.92E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone7ag1594 K17506 - rcu:8281649 454.521